Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
PTP4A1Q93096 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PTP4A1Q93096 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.19□□□□□ -1.58
PTP4A1Q93096 AC092376.2-201ENST00000622621 4116 ntBASIC5.19□□□□□ -1.58
PTP4A1Q93096 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
PTP4A1Q93096 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PTP4A1Q93096 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PTP4A1Q93096 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
PTP4A1Q93096 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.18□□□□□ -1.58
PTP4A1Q93096 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PTP4A1Q93096 AL359715.4-201ENST00000606629 1436 ntBASIC5.18□□□□□ -1.58
PTP4A1Q93096 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.18□□□□□ -1.58
PTP4A1Q93096 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PTP4A1Q93096 SNORA51.9-201ENST00000384295 124 ntBASIC5.18□□□□□ -1.58
PTP4A1Q93096 SNORA68.2-201ENST00000391263 128 ntBASIC5.18□□□□□ -1.58
PTP4A1Q93096 OOSP1-201ENST00000398992 1270 ntBASIC5.18□□□□□ -1.58
PTP4A1Q93096 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.18□□□□□ -1.58
PTP4A1Q93096 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.18□□□□□ -1.58
PTP4A1Q93096 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
PTP4A1Q93096 AL590623.1-201ENST00000427864 105 ntBASIC5.18□□□□□ -1.58
PTP4A1Q93096 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC5.18□□□□□ -1.58
PTP4A1Q93096 PNKDP1-201ENST00000435914 430 ntBASIC5.18□□□□□ -1.58
PTP4A1Q93096 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.18□□□□□ -1.58
PTP4A1Q93096 HGF-207ENST00000453018 721 ntTSL 3 BASIC5.18□□□□□ -1.58
PTP4A1Q93096 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.18□□□□□ -1.58
PTP4A1Q93096 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.18□□□□□ -1.58
PTP4A1Q93096 RNU7-27P-201ENST00000459281 62 ntBASIC5.18□□□□□ -1.58
PTP4A1Q93096 AC023194.2-201ENST00000465398 406 ntBASIC5.18□□□□□ -1.58
PTP4A1Q93096 AC104339.1-201ENST00000465478 348 ntBASIC5.18□□□□□ -1.58
PTP4A1Q93096 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.18□□□□□ -1.58
PTP4A1Q93096 CDH12P2-201ENST00000504393 298 ntBASIC5.18□□□□□ -1.58
PTP4A1Q93096 AC105384.2-201ENST00000508433 640 ntBASIC5.18□□□□□ -1.58
PTP4A1Q93096 APOBEC3AP1-201ENST00000511396 287 ntBASIC5.18□□□□□ -1.58
PTP4A1Q93096 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC5.18□□□□□ -1.58
PTP4A1Q93096 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.18□□□□□ -1.58
PTP4A1Q93096 RNU6-889P-201ENST00000517189 103 ntBASIC5.18□□□□□ -1.58
PTP4A1Q93096 AC011853.1-201ENST00000518911 454 ntBASIC5.18□□□□□ -1.58
PTP4A1Q93096 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
PTP4A1Q93096 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.18□□□□□ -1.58
PTP4A1Q93096 AC137627.1-201ENST00000545761 289 ntBASIC5.18□□□□□ -1.58
PTP4A1Q93096 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.18□□□□□ -1.58
PTP4A1Q93096 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.18□□□□□ -1.58
PTP4A1Q93096 SS18L2P2-201ENST00000583960 235 ntBASIC5.18□□□□□ -1.58
PTP4A1Q93096 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PTP4A1Q93096 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.18□□□□□ -1.58
PTP4A1Q93096 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC5.18□□□□□ -1.58
PTP4A1Q93096 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC5.18□□□□□ -1.58
PTP4A1Q93096 AC092266.1-201ENST00000610958 165 ntBASIC5.18□□□□□ -1.58
PTP4A1Q93096 BNIP3P41-202ENST00000616656 861 ntBASIC5.18□□□□□ -1.58
PTP4A1Q93096 AC245014.3-201ENST00000618589 347 ntBASIC5.18□□□□□ -1.58
PTP4A1Q93096 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.18□□□□□ -1.58
PTP4A1Q93096 AC073592.6-201ENST00000624271 415 ntBASIC5.18□□□□□ -1.58
PTP4A1Q93096 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.18□□□□□ -1.58
PTP4A1Q93096 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.18□□□□□ -1.58
PTP4A1Q93096 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.18□□□□□ -1.58
PTP4A1Q93096 AC009229.4-201ENST00000623854 1947 ntBASIC5.18□□□□□ -1.58
PTP4A1Q93096 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PTP4A1Q93096 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.18□□□□□ -1.58
PTP4A1Q93096 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PTP4A1Q93096 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.18□□□□□ -1.58
PTP4A1Q93096 AL450326.2-201ENST00000421913 1962 ntBASIC5.18□□□□□ -1.58
PTP4A1Q93096 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PTP4A1Q93096 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PTP4A1Q93096 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PTP4A1Q93096 AL445437.1-201ENST00000623157 3087 ntBASIC5.17□□□□□ -1.58
PTP4A1Q93096 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.17□□□□□ -1.58
PTP4A1Q93096 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.17□□□□□ -1.58
PTP4A1Q93096 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.17□□□□□ -1.58
PTP4A1Q93096 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.17□□□□□ -1.58
PTP4A1Q93096 AC090017.1-201ENST00000548612 1779 ntBASIC5.17□□□□□ -1.58
PTP4A1Q93096 AC093225.1-201ENST00000506867 1408 ntBASIC5.17□□□□□ -1.58
PTP4A1Q93096 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PTP4A1Q93096 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.17□□□□□ -1.58
PTP4A1Q93096 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
PTP4A1Q93096 COX6B1P3-201ENST00000312310 260 ntBASIC5.17□□□□□ -1.58
PTP4A1Q93096 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PTP4A1Q93096 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.17□□□□□ -1.58
PTP4A1Q93096 RNU6-304P-201ENST00000364855 107 ntBASIC5.17□□□□□ -1.58
PTP4A1Q93096 RN7SKP187-201ENST00000365536 330 ntBASIC5.17□□□□□ -1.58
PTP4A1Q93096 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
PTP4A1Q93096 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC5.17□□□□□ -1.58
PTP4A1Q93096 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.17□□□□□ -1.58
PTP4A1Q93096 AC093719.1-202ENST00000392735 373 ntBASIC5.17□□□□□ -1.58
PTP4A1Q93096 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
PTP4A1Q93096 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PTP4A1Q93096 RPS20P25-201ENST00000412447 352 ntBASIC5.17□□□□□ -1.58
PTP4A1Q93096 AL590609.2-201ENST00000421430 368 ntBASIC5.17□□□□□ -1.58
PTP4A1Q93096 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.17□□□□□ -1.58
PTP4A1Q93096 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.17□□□□□ -1.58
PTP4A1Q93096 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.17□□□□□ -1.58
PTP4A1Q93096 MTCO3P21-201ENST00000430791 643 ntBASIC5.17□□□□□ -1.58
PTP4A1Q93096 GAPDHP48-201ENST00000436626 961 ntBASIC5.17□□□□□ -1.58
PTP4A1Q93096 TUBB4BP6-201ENST00000437576 479 ntBASIC5.17□□□□□ -1.58
PTP4A1Q93096 ATP5LP2-201ENST00000440646 311 ntBASIC5.17□□□□□ -1.58
PTP4A1Q93096 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.17□□□□□ -1.58
PTP4A1Q93096 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.17□□□□□ -1.58
PTP4A1Q93096 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.17□□□□□ -1.58
PTP4A1Q93096 RPL12P24-201ENST00000474907 486 ntBASIC5.17□□□□□ -1.58
PTP4A1Q93096 RPS7P6-201ENST00000485777 579 ntBASIC5.17□□□□□ -1.58
PTP4A1Q93096 AC069304.1-201ENST00000491593 704 ntBASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms