Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC3.53□□□□□ -1.84
ALMS1Q8TCU4 AC010928.1-201ENST00000592477 1447 ntBASIC3.53□□□□□ -1.84
ALMS1Q8TCU4 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC3.53□□□□□ -1.84
ALMS1Q8TCU4 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC3.53□□□□□ -1.84
ALMS1Q8TCU4 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC3.53□□□□□ -1.84
ALMS1Q8TCU4 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
ALMS1Q8TCU4 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
ALMS1Q8TCU4 AL592148.3-201ENST00000608771 2646 ntBASIC3.53□□□□□ -1.84
ALMS1Q8TCU4 ABCC2-202ENST00000370449 5312 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
ALMS1Q8TCU4 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
ALMS1Q8TCU4 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
ALMS1Q8TCU4 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
ALMS1Q8TCU4 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC3.53□□□□□ -1.84
ALMS1Q8TCU4 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC3.53□□□□□ -1.84
ALMS1Q8TCU4 IGKV2D-10-201ENST00000520194 281 ntBASIC3.53□□□□□ -1.84
ALMS1Q8TCU4 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.53□□□□□ -1.84
ALMS1Q8TCU4 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC3.53□□□□□ -1.84
ALMS1Q8TCU4 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC3.53□□□□□ -1.84
ALMS1Q8TCU4 AC008814.1-201ENST00000603797 406 ntBASIC3.53□□□□□ -1.84
ALMS1Q8TCU4 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC3.53□□□□□ -1.84
ALMS1Q8TCU4 MVP-219ENST00000629059 120 ntTSL 5 BASIC3.53□□□□□ -1.84
ALMS1Q8TCU4 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
ALMS1Q8TCU4 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
ALMS1Q8TCU4 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC3.53□□□□□ -1.84
ALMS1Q8TCU4 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC3.53□□□□□ -1.84
ALMS1Q8TCU4 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC3.52□□□□□ -1.85
ALMS1Q8TCU4 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
ALMS1Q8TCU4 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
ALMS1Q8TCU4 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
ALMS1Q8TCU4 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
ALMS1Q8TCU4 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
ALMS1Q8TCU4 RNA5SP388-201ENST00000362584 119 ntBASIC3.52□□□□□ -1.85
ALMS1Q8TCU4 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
ALMS1Q8TCU4 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
ALMS1Q8TCU4 RPS3AP23-201ENST00000401762 784 ntBASIC3.52□□□□□ -1.85
ALMS1Q8TCU4 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC3.52□□□□□ -1.85
ALMS1Q8TCU4 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.52□□□□□ -1.85
ALMS1Q8TCU4 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC3.52□□□□□ -1.85
ALMS1Q8TCU4 RPL21P129-201ENST00000491732 478 ntBASIC3.52□□□□□ -1.85
ALMS1Q8TCU4 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC3.52□□□□□ -1.85
ALMS1Q8TCU4 AC137627.1-201ENST00000545761 289 ntBASIC3.52□□□□□ -1.85
ALMS1Q8TCU4 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC3.52□□□□□ -1.85
ALMS1Q8TCU4 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC3.52□□□□□ -1.85
ALMS1Q8TCU4 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC3.52□□□□□ -1.85
ALMS1Q8TCU4 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC3.52□□□□□ -1.85
ALMS1Q8TCU4 TACC1-210ENST00000520615 5509 ntTSL 2 BASIC3.52□□□□□ -1.85
ALMS1Q8TCU4 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC3.52□□□□□ -1.85
ALMS1Q8TCU4 NIPA1-202ENST00000437912 7613 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
ALMS1Q8TCU4 SAMM50P1-201ENST00000455403 1399 ntBASIC3.52□□□□□ -1.85
ALMS1Q8TCU4 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
ALMS1Q8TCU4 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
ALMS1Q8TCU4 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC3.52□□□□□ -1.85
ALMS1Q8TCU4 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
ALMS1Q8TCU4 AL359837.1-201ENST00000381357 287 ntBASIC3.52□□□□□ -1.85
ALMS1Q8TCU4 RPL12P43-201ENST00000420608 499 ntBASIC3.52□□□□□ -1.85
ALMS1Q8TCU4 RPL12P34-201ENST00000424532 479 ntBASIC3.52□□□□□ -1.85
ALMS1Q8TCU4 FHP1-201ENST00000442741 703 ntBASIC3.52□□□□□ -1.85
ALMS1Q8TCU4 RPL7AP52-201ENST00000458096 790 ntBASIC3.52□□□□□ -1.85
ALMS1Q8TCU4 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC3.52□□□□□ -1.85
ALMS1Q8TCU4 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC3.52□□□□□ -1.85
ALMS1Q8TCU4 RPL12P25-202ENST00000598100 674 ntBASIC3.52□□□□□ -1.85
ALMS1Q8TCU4 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC3.52□□□□□ -1.85
ALMS1Q8TCU4 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
ALMS1Q8TCU4 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
ALMS1Q8TCU4 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
ALMS1Q8TCU4 UGT2B24P-201ENST00000514441 1597 ntBASIC3.52□□□□□ -1.85
ALMS1Q8TCU4 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC3.52□□□□□ -1.85
ALMS1Q8TCU4 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC3.52□□□□□ -1.85
ALMS1Q8TCU4 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
ALMS1Q8TCU4 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC3.52□□□□□ -1.85
ALMS1Q8TCU4 DLG1-202ENST00000357674 4931 ntAPPRIS ALT1 TSL 1 (best) BASIC3.52□□□□□ -1.85
ALMS1Q8TCU4 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC3.52□□□□□ -1.85
ALMS1Q8TCU4 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC3.52□□□□□ -1.85
ALMS1Q8TCU4 AC100871.1-201ENST00000507871 1456 ntBASIC3.52□□□□□ -1.85
ALMS1Q8TCU4 TACC1-207ENST00000519416 5510 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
ALMS1Q8TCU4 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
ALMS1Q8TCU4 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
ALMS1Q8TCU4 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.52□□□□□ -1.85
ALMS1Q8TCU4 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
ALMS1Q8TCU4 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC3.52□□□□□ -1.85
ALMS1Q8TCU4 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC3.52□□□□□ -1.85
ALMS1Q8TCU4 RPL10P17-201ENST00000453852 316 ntBASIC3.52□□□□□ -1.85
ALMS1Q8TCU4 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC3.52□□□□□ -1.85
ALMS1Q8TCU4 AC138701.1-201ENST00000524329 714 ntBASIC3.52□□□□□ -1.85
ALMS1Q8TCU4 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC3.52□□□□□ -1.85
ALMS1Q8TCU4 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
ALMS1Q8TCU4 AC098935.2-201ENST00000604222 466 ntBASIC3.52□□□□□ -1.85
ALMS1Q8TCU4 AL133481.2-203ENST00000607558 139 ntBASIC3.52□□□□□ -1.85
ALMS1Q8TCU4 MIR92B-201ENST00000607575 96 ntBASIC3.52□□□□□ -1.85
ALMS1Q8TCU4 UBA3-213ENST00000631029 123 ntTSL 5 BASIC3.52□□□□□ -1.85
ALMS1Q8TCU4 AC073869.8-201ENST00000641806 335 ntBASIC3.52□□□□□ -1.85
ALMS1Q8TCU4 AL137100.1-201ENST00000556703 1620 ntBASIC3.52□□□□□ -1.85
ALMS1Q8TCU4 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC3.52□□□□□ -1.85
ALMS1Q8TCU4 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
ALMS1Q8TCU4 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
ALMS1Q8TCU4 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC3.52□□□□□ -1.85
ALMS1Q8TCU4 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC3.52□□□□□ -1.85
ALMS1Q8TCU4 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
ALMS1Q8TCU4 IL16-204ENST00000394660 9616 ntAPPRIS ALT2 TSL 2 BASIC3.52□□□□□ -1.85
ALMS1Q8TCU4 KARSP3-201ENST00000571212 1504 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms