Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC8.07□□□□□ -1.12
VPS8Q8N3P4 RPL7P61-201ENST00000451721 751 ntBASIC8.07□□□□□ -1.12
VPS8Q8N3P4 AC147055.3-201ENST00000510547 851 ntBASIC8.07□□□□□ -1.12
VPS8Q8N3P4 AP006245.2-201ENST00000522004 300 ntBASIC8.07□□□□□ -1.12
VPS8Q8N3P4 PRPF19P1-201ENST00000584766 898 ntBASIC8.07□□□□□ -1.12
VPS8Q8N3P4 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC8.07□□□□□ -1.12
VPS8Q8N3P4 AC005229.3-201ENST00000603438 323 ntBASIC8.07□□□□□ -1.12
VPS8Q8N3P4 AC133644.2-201ENST00000608142 540 ntBASIC8.07□□□□□ -1.12
VPS8Q8N3P4 AC026367.3-201ENST00000619032 590 ntBASIC8.07□□□□□ -1.12
VPS8Q8N3P4 AF117829.2-201ENST00000619538 361 ntBASIC8.07□□□□□ -1.12
VPS8Q8N3P4 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC8.07□□□□□ -1.12
VPS8Q8N3P4 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC8.07□□□□□ -1.12
VPS8Q8N3P4 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC8.07□□□□□ -1.12
VPS8Q8N3P4 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC8.07□□□□□ -1.12
VPS8Q8N3P4 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
VPS8Q8N3P4 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
VPS8Q8N3P4 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
VPS8Q8N3P4 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
VPS8Q8N3P4 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC8.07□□□□□ -1.12
VPS8Q8N3P4 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.12
VPS8Q8N3P4 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
VPS8Q8N3P4 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC8.06□□□□□ -1.12
VPS8Q8N3P4 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
VPS8Q8N3P4 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
VPS8Q8N3P4 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
VPS8Q8N3P4 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC8.06□□□□□ -1.12
VPS8Q8N3P4 RNA5SP223-201ENST00000365174 120 ntBASIC8.06□□□□□ -1.12
VPS8Q8N3P4 OR1L6-202ENST00000373684 1044 ntBASIC8.06□□□□□ -1.12
VPS8Q8N3P4 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC8.06□□□□□ -1.12
VPS8Q8N3P4 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC8.06□□□□□ -1.12
VPS8Q8N3P4 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC8.06□□□□□ -1.12
VPS8Q8N3P4 RPL12P3-201ENST00000440080 396 ntBASIC8.06□□□□□ -1.12
VPS8Q8N3P4 AC115223.1-201ENST00000466377 870 ntBASIC8.06□□□□□ -1.12
VPS8Q8N3P4 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC8.06□□□□□ -1.12
VPS8Q8N3P4 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC8.06□□□□□ -1.12
VPS8Q8N3P4 OR5D15P-201ENST00000531671 942 ntBASIC8.06□□□□□ -1.12
VPS8Q8N3P4 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC8.06□□□□□ -1.12
VPS8Q8N3P4 AL512310.9-201ENST00000553311 948 ntBASIC8.06□□□□□ -1.12
VPS8Q8N3P4 AC105254.2-201ENST00000603636 436 ntBASIC8.06□□□□□ -1.12
VPS8Q8N3P4 AC108359.1-201ENST00000616451 1211 ntBASIC8.06□□□□□ -1.12
VPS8Q8N3P4 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC8.06□□□□□ -1.12
VPS8Q8N3P4 CASC19-281ENST00000642118 1554 ntBASIC8.06□□□□□ -1.12
VPS8Q8N3P4 IL22RA2-203ENST00000349184 2801 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
VPS8Q8N3P4 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC8.06□□□□□ -1.12
VPS8Q8N3P4 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
VPS8Q8N3P4 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
VPS8Q8N3P4 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
VPS8Q8N3P4 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC8.06□□□□□ -1.12
VPS8Q8N3P4 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC8.06□□□□□ -1.12
VPS8Q8N3P4 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC8.06□□□□□ -1.12
VPS8Q8N3P4 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC8.06□□□□□ -1.12
VPS8Q8N3P4 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
VPS8Q8N3P4 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
VPS8Q8N3P4 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
VPS8Q8N3P4 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC8.05□□□□□ -1.12
VPS8Q8N3P4 RNA5SP428-201ENST00000365129 132 ntBASIC8.05□□□□□ -1.12
VPS8Q8N3P4 MRRF-207ENST00000373729 870 ntTSL 3 BASIC8.05□□□□□ -1.12
VPS8Q8N3P4 AC006455.6-201ENST00000426192 893 ntBASIC8.05□□□□□ -1.12
VPS8Q8N3P4 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC8.05□□□□□ -1.12
VPS8Q8N3P4 COX6B1P5-201ENST00000509843 249 ntBASIC8.05□□□□□ -1.12
VPS8Q8N3P4 AC016559.2-201ENST00000510759 359 ntBASIC8.05□□□□□ -1.12
VPS8Q8N3P4 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC8.05□□□□□ -1.12
VPS8Q8N3P4 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC8.05□□□□□ -1.12
VPS8Q8N3P4 NOP10-202ENST00000557912 436 ntTSL 2 BASIC8.05□□□□□ -1.12
VPS8Q8N3P4 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
VPS8Q8N3P4 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC8.05□□□□□ -1.12
VPS8Q8N3P4 AC020763.5-201ENST00000623298 430 ntBASIC8.05□□□□□ -1.12
VPS8Q8N3P4 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
VPS8Q8N3P4 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC8.05□□□□□ -1.12
VPS8Q8N3P4 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
VPS8Q8N3P4 AC092451.3-201ENST00000625067 1343 ntBASIC8.05□□□□□ -1.12
VPS8Q8N3P4 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
VPS8Q8N3P4 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
VPS8Q8N3P4 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
VPS8Q8N3P4 AC007996.1-201ENST00000620414 2821 ntBASIC8.05□□□□□ -1.12
VPS8Q8N3P4 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
VPS8Q8N3P4 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
VPS8Q8N3P4 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
VPS8Q8N3P4 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC8.05□□□□□ -1.12
VPS8Q8N3P4 CASC19-260ENST00000641828 2001 ntBASIC8.04□□□□□ -1.12
VPS8Q8N3P4 SNORA74A-201ENST00000364089 198 ntBASIC8.04□□□□□ -1.12
VPS8Q8N3P4 SNORA2.3-201ENST00000383920 135 ntBASIC8.04□□□□□ -1.12
VPS8Q8N3P4 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC8.04□□□□□ -1.12
VPS8Q8N3P4 AC009238.2-201ENST00000431026 355 ntBASIC8.04□□□□□ -1.12
VPS8Q8N3P4 IGHV5-78-201ENST00000450948 295 ntBASIC8.04□□□□□ -1.12
VPS8Q8N3P4 RPS17P2-201ENST00000461663 408 ntBASIC8.04□□□□□ -1.12
VPS8Q8N3P4 IGLV2-34-201ENST00000490007 283 ntBASIC8.04□□□□□ -1.12
VPS8Q8N3P4 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
VPS8Q8N3P4 FGB-207ENST00000509493 1164 ntTSL 5 BASIC8.04□□□□□ -1.12
VPS8Q8N3P4 AC098976.1-201ENST00000513014 541 ntBASIC8.04□□□□□ -1.12
VPS8Q8N3P4 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC8.04□□□□□ -1.12
VPS8Q8N3P4 OR7E128P-201ENST00000532736 1024 ntBASIC8.04□□□□□ -1.12
VPS8Q8N3P4 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
VPS8Q8N3P4 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC8.04□□□□□ -1.12
VPS8Q8N3P4 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC8.04□□□□□ -1.12
VPS8Q8N3P4 OR1F2P-201ENST00000570470 933 ntBASIC8.04□□□□□ -1.12
VPS8Q8N3P4 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC8.04□□□□□ -1.12
VPS8Q8N3P4 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
VPS8Q8N3P4 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
VPS8Q8N3P4 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms