Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.3□□□□□ -1.56
CLIP4Q8N3C7 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
CLIP4Q8N3C7 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CLIP4Q8N3C7 THAP12P5-201ENST00000405864 2275 ntBASIC5.3□□□□□ -1.56
CLIP4Q8N3C7 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CLIP4Q8N3C7 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CLIP4Q8N3C7 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CLIP4Q8N3C7 RN7SKP185-201ENST00000362813 326 ntBASIC5.3□□□□□ -1.56
CLIP4Q8N3C7 RNU6-609P-201ENST00000365459 107 ntBASIC5.3□□□□□ -1.56
CLIP4Q8N3C7 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CLIP4Q8N3C7 RNU1-136P-201ENST00000384181 164 ntBASIC5.3□□□□□ -1.56
CLIP4Q8N3C7 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC5.3□□□□□ -1.56
CLIP4Q8N3C7 MRPL53P1-201ENST00000414323 319 ntBASIC5.3□□□□□ -1.56
CLIP4Q8N3C7 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.3□□□□□ -1.56
CLIP4Q8N3C7 BX284632.2-201ENST00000421091 399 ntBASIC5.3□□□□□ -1.56
CLIP4Q8N3C7 UBE2D3P3-201ENST00000426992 425 ntBASIC5.3□□□□□ -1.56
CLIP4Q8N3C7 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC5.3□□□□□ -1.56
CLIP4Q8N3C7 Z80107.1-201ENST00000436830 412 ntBASIC5.3□□□□□ -1.56
CLIP4Q8N3C7 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.3□□□□□ -1.56
CLIP4Q8N3C7 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.3□□□□□ -1.56
CLIP4Q8N3C7 AL512605.1-202ENST00000441919 381 ntBASIC5.3□□□□□ -1.56
CLIP4Q8N3C7 AL359955.2-201ENST00000445380 353 ntBASIC5.3□□□□□ -1.56
CLIP4Q8N3C7 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.3□□□□□ -1.56
CLIP4Q8N3C7 OR7E116P-201ENST00000448529 957 ntBASIC5.3□□□□□ -1.56
CLIP4Q8N3C7 RPS23P9-201ENST00000448848 438 ntBASIC5.3□□□□□ -1.56
CLIP4Q8N3C7 AC098826.2-201ENST00000452011 651 ntBASIC5.3□□□□□ -1.56
CLIP4Q8N3C7 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.3□□□□□ -1.56
CLIP4Q8N3C7 RN7SL197P-201ENST00000466981 299 ntBASIC5.3□□□□□ -1.56
CLIP4Q8N3C7 DUTP1-201ENST00000493631 470 ntBASIC5.3□□□□□ -1.56
CLIP4Q8N3C7 RPEP1-201ENST00000504507 658 ntBASIC5.3□□□□□ -1.56
CLIP4Q8N3C7 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC5.3□□□□□ -1.56
CLIP4Q8N3C7 APOBEC3AP1-201ENST00000511396 287 ntBASIC5.3□□□□□ -1.56
CLIP4Q8N3C7 RNU6-1102P-201ENST00000516149 96 ntBASIC5.3□□□□□ -1.56
CLIP4Q8N3C7 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.3□□□□□ -1.56
CLIP4Q8N3C7 AC139365.2-201ENST00000517972 253 ntBASIC5.3□□□□□ -1.56
CLIP4Q8N3C7 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC5.3□□□□□ -1.56
CLIP4Q8N3C7 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.3□□□□□ -1.56
CLIP4Q8N3C7 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.3□□□□□ -1.56
CLIP4Q8N3C7 AC084824.2-201ENST00000548906 345 ntBASIC5.3□□□□□ -1.56
CLIP4Q8N3C7 AC079905.1-201ENST00000549280 475 ntBASIC5.3□□□□□ -1.56
CLIP4Q8N3C7 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC5.3□□□□□ -1.56
CLIP4Q8N3C7 CYCSP38-201ENST00000559840 322 ntBASIC5.3□□□□□ -1.56
CLIP4Q8N3C7 AC096996.1-201ENST00000563813 325 ntBASIC5.3□□□□□ -1.56
CLIP4Q8N3C7 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.3□□□□□ -1.56
CLIP4Q8N3C7 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.3□□□□□ -1.56
CLIP4Q8N3C7 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC5.3□□□□□ -1.56
CLIP4Q8N3C7 AL357094.1-201ENST00000603845 844 ntBASIC5.3□□□□□ -1.56
CLIP4Q8N3C7 KATNBL1P5-201ENST00000605015 517 ntBASIC5.3□□□□□ -1.56
CLIP4Q8N3C7 AC005156.1-201ENST00000613371 573 ntBASIC5.3□□□□□ -1.56
CLIP4Q8N3C7 AC005618.4-201ENST00000625053 554 ntBASIC5.3□□□□□ -1.56
CLIP4Q8N3C7 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
CLIP4Q8N3C7 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.3□□□□□ -1.56
CLIP4Q8N3C7 AC092376.2-201ENST00000622621 4116 ntBASIC5.3□□□□□ -1.56
CLIP4Q8N3C7 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CLIP4Q8N3C7 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CLIP4Q8N3C7 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC5.29□□□□□ -1.56
CLIP4Q8N3C7 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CLIP4Q8N3C7 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CLIP4Q8N3C7 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
CLIP4Q8N3C7 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CLIP4Q8N3C7 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CLIP4Q8N3C7 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CLIP4Q8N3C7 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
CLIP4Q8N3C7 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CLIP4Q8N3C7 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CLIP4Q8N3C7 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.29□□□□□ -1.56
CLIP4Q8N3C7 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.29□□□□□ -1.56
CLIP4Q8N3C7 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.29□□□□□ -1.56
CLIP4Q8N3C7 TMSB4XP2-201ENST00000335179 210 ntBASIC5.29□□□□□ -1.56
CLIP4Q8N3C7 RNA5SP273-201ENST00000362484 113 ntBASIC5.29□□□□□ -1.56
CLIP4Q8N3C7 RNU6-1331P-201ENST00000363658 106 ntBASIC5.29□□□□□ -1.56
CLIP4Q8N3C7 RNU1-65P-201ENST00000363919 148 ntBASIC5.29□□□□□ -1.56
CLIP4Q8N3C7 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.29□□□□□ -1.56
CLIP4Q8N3C7 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CLIP4Q8N3C7 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC5.29□□□□□ -1.56
CLIP4Q8N3C7 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.29□□□□□ -1.56
CLIP4Q8N3C7 AL357752.1-201ENST00000412817 349 ntBASIC5.29□□□□□ -1.56
CLIP4Q8N3C7 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CLIP4Q8N3C7 RNGTTP1-201ENST00000420965 728 ntBASIC5.29□□□□□ -1.56
CLIP4Q8N3C7 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC5.29□□□□□ -1.56
CLIP4Q8N3C7 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.29□□□□□ -1.56
CLIP4Q8N3C7 EIF5AP4-201ENST00000441206 465 ntBASIC5.29□□□□□ -1.56
CLIP4Q8N3C7 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.29□□□□□ -1.56
CLIP4Q8N3C7 SUMO2P1-206ENST00000445436 284 ntBASIC5.29□□□□□ -1.56
CLIP4Q8N3C7 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.29□□□□□ -1.56
CLIP4Q8N3C7 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.29□□□□□ -1.56
CLIP4Q8N3C7 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC5.29□□□□□ -1.56
CLIP4Q8N3C7 AC118758.1-202ENST00000454719 225 ntBASIC5.29□□□□□ -1.56
CLIP4Q8N3C7 AC068228.1-201ENST00000461723 211 ntBASIC5.29□□□□□ -1.56
CLIP4Q8N3C7 AC016687.1-201ENST00000482574 353 ntBASIC5.29□□□□□ -1.56
CLIP4Q8N3C7 RPS7P6-201ENST00000485777 579 ntBASIC5.29□□□□□ -1.56
CLIP4Q8N3C7 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CLIP4Q8N3C7 MTCO2P9-201ENST00000503214 694 ntBASIC5.29□□□□□ -1.56
CLIP4Q8N3C7 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC5.29□□□□□ -1.56
CLIP4Q8N3C7 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC5.29□□□□□ -1.56
CLIP4Q8N3C7 GAPDHP71-201ENST00000511530 1003 ntBASIC5.29□□□□□ -1.56
CLIP4Q8N3C7 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC5.29□□□□□ -1.56
CLIP4Q8N3C7 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC5.29□□□□□ -1.56
CLIP4Q8N3C7 GAPDHP62-201ENST00000515313 990 ntBASIC5.29□□□□□ -1.56
CLIP4Q8N3C7 SCARNA18.1-201ENST00000516330 83 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms