Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC4.13□□□□□ -1.75
VPS13CQ709C8 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC4.13□□□□□ -1.75
VPS13CQ709C8 CCDC58P3-201ENST00000590792 430 ntBASIC4.13□□□□□ -1.75
VPS13CQ709C8 UGP2-232ENST00000640075 567 ntTSL 5 BASIC4.13□□□□□ -1.75
VPS13CQ709C8 CHD2-201ENST00000394196 9363 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
VPS13CQ709C8 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
VPS13CQ709C8 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.13□□□□□ -1.75
VPS13CQ709C8 AL031651.1-201ENST00000615357 1438 ntBASIC4.13□□□□□ -1.75
VPS13CQ709C8 AL122126.1-201ENST00000546905 1318 ntBASIC4.13□□□□□ -1.75
VPS13CQ709C8 RNA5SP28-201ENST00000363841 119 ntBASIC4.13□□□□□ -1.75
VPS13CQ709C8 RPL7P57-201ENST00000423238 740 ntBASIC4.13□□□□□ -1.75
VPS13CQ709C8 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC4.13□□□□□ -1.75
VPS13CQ709C8 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.13□□□□□ -1.75
VPS13CQ709C8 RN7SL441P-201ENST00000492388 296 ntBASIC4.13□□□□□ -1.75
VPS13CQ709C8 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.13□□□□□ -1.75
VPS13CQ709C8 AC004232.3-201ENST00000622977 525 ntBASIC4.13□□□□□ -1.75
VPS13CQ709C8 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
VPS13CQ709C8 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
VPS13CQ709C8 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC4.13□□□□□ -1.75
VPS13CQ709C8 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
VPS13CQ709C8 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
VPS13CQ709C8 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
VPS13CQ709C8 RNU1-64P-201ENST00000365443 163 ntBASIC4.12□□□□□ -1.75
VPS13CQ709C8 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.12□□□□□ -1.75
VPS13CQ709C8 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
VPS13CQ709C8 RPL6P5-201ENST00000445678 828 ntBASIC4.12□□□□□ -1.75
VPS13CQ709C8 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
VPS13CQ709C8 AC020593.1-201ENST00000507399 299 ntBASIC4.12□□□□□ -1.75
VPS13CQ709C8 MIR3138-201ENST00000585238 82 ntBASIC4.12□□□□□ -1.75
VPS13CQ709C8 FRMPD4-202ENST00000616992 7916 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
VPS13CQ709C8 SHROOM4-203ENST00000460112 8919 ntTSL 5 BASIC4.12□□□□□ -1.75
VPS13CQ709C8 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
VPS13CQ709C8 RASSF2-202ENST00000379400 5427 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
VPS13CQ709C8 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
VPS13CQ709C8 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
VPS13CQ709C8 KIF1B-212ENST00000622724 8588 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
VPS13CQ709C8 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
VPS13CQ709C8 LRP1-201ENST00000243077 14897 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
VPS13CQ709C8 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
VPS13CQ709C8 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC4.12□□□□□ -1.75
VPS13CQ709C8 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC4.12□□□□□ -1.75
VPS13CQ709C8 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC4.12□□□□□ -1.75
VPS13CQ709C8 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC4.12□□□□□ -1.75
VPS13CQ709C8 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.12□□□□□ -1.75
VPS13CQ709C8 SNORA31.9-201ENST00000516429 84 ntBASIC4.12□□□□□ -1.75
VPS13CQ709C8 RNA5SP143-201ENST00000516936 115 ntBASIC4.12□□□□□ -1.75
VPS13CQ709C8 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.12□□□□□ -1.75
VPS13CQ709C8 AL049839.1-201ENST00000556151 657 ntBASIC4.12□□□□□ -1.75
VPS13CQ709C8 AC245389.1-201ENST00000605141 529 ntBASIC4.12□□□□□ -1.75
VPS13CQ709C8 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC4.12□□□□□ -1.75
VPS13CQ709C8 SNX18P1Y-201ENST00000616231 511 ntBASIC4.12□□□□□ -1.75
VPS13CQ709C8 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
VPS13CQ709C8 EYA4-206ENST00000431403 2154 ntTSL 5 BASIC4.12□□□□□ -1.75
VPS13CQ709C8 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.12□□□□□ -1.75
VPS13CQ709C8 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
VPS13CQ709C8 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
VPS13CQ709C8 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.12□□□□□ -1.75
VPS13CQ709C8 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
VPS13CQ709C8 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC4.12□□□□□ -1.75
VPS13CQ709C8 CASC19-284ENST00000642142 1868 ntBASIC4.12□□□□□ -1.75
VPS13CQ709C8 EP400-204ENST00000389561 12317 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
VPS13CQ709C8 AL121657.1-201ENST00000327215 531 ntBASIC4.12□□□□□ -1.75
VPS13CQ709C8 ATP5HP3-201ENST00000396994 486 ntBASIC4.12□□□□□ -1.75
VPS13CQ709C8 CASKP1-201ENST00000412870 582 ntBASIC4.12□□□□□ -1.75
VPS13CQ709C8 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.12□□□□□ -1.75
VPS13CQ709C8 CEACAMP6-201ENST00000452007 574 ntBASIC4.12□□□□□ -1.75
VPS13CQ709C8 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.12□□□□□ -1.75
VPS13CQ709C8 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC4.12□□□□□ -1.75
VPS13CQ709C8 AC005191.1-201ENST00000603950 358 ntBASIC4.12□□□□□ -1.75
VPS13CQ709C8 AC021106.3-201ENST00000623925 531 ntBASIC4.12□□□□□ -1.75
VPS13CQ709C8 AL080317.3-201ENST00000607434 4315 ntBASIC4.12□□□□□ -1.75
VPS13CQ709C8 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
VPS13CQ709C8 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
VPS13CQ709C8 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
VPS13CQ709C8 GRIK2-207ENST00000421544 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
VPS13CQ709C8 FOXJ3-205ENST00000372573 5309 ntAPPRIS P3 TSL 2 BASIC4.11□□□□□ -1.75
VPS13CQ709C8 LIPG-201ENST00000261292 10441 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
VPS13CQ709C8 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC4.11□□□□□ -1.75
VPS13CQ709C8 ATXN1-201ENST00000244769 10602 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
VPS13CQ709C8 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
VPS13CQ709C8 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
VPS13CQ709C8 YWHAZP2-201ENST00000440317 728 ntBASIC4.11□□□□□ -1.75
VPS13CQ709C8 PHBP16-201ENST00000446318 950 ntBASIC4.11□□□□□ -1.75
VPS13CQ709C8 RPL17P2-201ENST00000491913 451 ntBASIC4.11□□□□□ -1.75
VPS13CQ709C8 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.11□□□□□ -1.75
VPS13CQ709C8 ARL6IP1P3-201ENST00000524544 560 ntBASIC4.11□□□□□ -1.75
VPS13CQ709C8 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.11□□□□□ -1.75
VPS13CQ709C8 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.11□□□□□ -1.75
VPS13CQ709C8 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.11□□□□□ -1.75
VPS13CQ709C8 AL137058.3-201ENST00000624531 3099 ntBASIC4.11□□□□□ -1.75
VPS13CQ709C8 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC4.11□□□□□ -1.75
VPS13CQ709C8 ARHGEF11-202ENST00000368194 6889 ntAPPRIS P4 TSL 1 (best) BASIC4.11□□□□□ -1.75
VPS13CQ709C8 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
VPS13CQ709C8 TTC7B-201ENST00000328459 19458 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
VPS13CQ709C8 KIF6-202ENST00000287152 9082 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
VPS13CQ709C8 UTY-210ENST00000538878 6574 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
VPS13CQ709C8 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
VPS13CQ709C8 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
VPS13CQ709C8 IGKV7-3-201ENST00000357453 298 ntBASIC4.11□□□□□ -1.75
VPS13CQ709C8 SNORA71.3-201ENST00000362582 128 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms