Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 RPL32P33-201ENST00000487023 394 ntBASIC5.09□□□□□ -1.59
NHLRC1Q6VVB1 NPM1P28-201ENST00000492269 840 ntBASIC5.09□□□□□ -1.59
NHLRC1Q6VVB1 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.09□□□□□ -1.59
NHLRC1Q6VVB1 PFN1P8-201ENST00000497012 543 ntBASIC5.09□□□□□ -1.59
NHLRC1Q6VVB1 AC021087.2-201ENST00000504656 1203 ntBASIC5.09□□□□□ -1.59
NHLRC1Q6VVB1 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC5.09□□□□□ -1.59
NHLRC1Q6VVB1 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC5.09□□□□□ -1.59
NHLRC1Q6VVB1 AC011411.1-201ENST00000509592 876 ntBASIC5.09□□□□□ -1.59
NHLRC1Q6VVB1 GAPDHP62-201ENST00000515313 990 ntBASIC5.09□□□□□ -1.59
NHLRC1Q6VVB1 SCARNA6.1-201ENST00000516989 238 ntBASIC5.09□□□□□ -1.59
NHLRC1Q6VVB1 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.09□□□□□ -1.59
NHLRC1Q6VVB1 AC018442.3-201ENST00000523025 183 ntBASIC5.09□□□□□ -1.59
NHLRC1Q6VVB1 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.09□□□□□ -1.59
NHLRC1Q6VVB1 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.09□□□□□ -1.59
NHLRC1Q6VVB1 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.09□□□□□ -1.59
NHLRC1Q6VVB1 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.09□□□□□ -1.59
NHLRC1Q6VVB1 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.09□□□□□ -1.59
NHLRC1Q6VVB1 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.09□□□□□ -1.59
NHLRC1Q6VVB1 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.09□□□□□ -1.59
NHLRC1Q6VVB1 ZNF322P1-201ENST00000568013 1209 ntBASIC5.09□□□□□ -1.59
NHLRC1Q6VVB1 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
NHLRC1Q6VVB1 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.09□□□□□ -1.59
NHLRC1Q6VVB1 MIR4260-201ENST00000583107 67 ntBASIC5.09□□□□□ -1.59
NHLRC1Q6VVB1 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.09□□□□□ -1.59
NHLRC1Q6VVB1 AC009237.13-201ENST00000603193 276 ntBASIC5.09□□□□□ -1.59
NHLRC1Q6VVB1 AC135803.1-201ENST00000608748 565 ntBASIC5.09□□□□□ -1.59
NHLRC1Q6VVB1 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
NHLRC1Q6VVB1 AC104307.1-201ENST00000616142 196 ntBASIC5.09□□□□□ -1.59
NHLRC1Q6VVB1 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
NHLRC1Q6VVB1 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC5.09□□□□□ -1.59
NHLRC1Q6VVB1 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.09□□□□□ -1.59
NHLRC1Q6VVB1 MIR1910-201ENST00000636955 80 ntBASIC5.09□□□□□ -1.59
NHLRC1Q6VVB1 OR5AC4P-202ENST00000642086 985 ntBASIC5.09□□□□□ -1.59
NHLRC1Q6VVB1 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
NHLRC1Q6VVB1 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
NHLRC1Q6VVB1 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
NHLRC1Q6VVB1 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
NHLRC1Q6VVB1 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
NHLRC1Q6VVB1 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.6
NHLRC1Q6VVB1 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
NHLRC1Q6VVB1 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.09□□□□□ -1.6
NHLRC1Q6VVB1 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.6
NHLRC1Q6VVB1 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.09□□□□□ -1.6
NHLRC1Q6VVB1 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
NHLRC1Q6VVB1 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.6
NHLRC1Q6VVB1 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
NHLRC1Q6VVB1 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NHLRC1Q6VVB1 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC5.08□□□□□ -1.6
NHLRC1Q6VVB1 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC5.08□□□□□ -1.6
NHLRC1Q6VVB1 AC017002.4-201ENST00000604721 1525 ntBASIC5.08□□□□□ -1.6
NHLRC1Q6VVB1 NXF4-202ENST00000416098 1465 ntBASIC5.08□□□□□ -1.6
NHLRC1Q6VVB1 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.08□□□□□ -1.6
NHLRC1Q6VVB1 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.08□□□□□ -1.6
NHLRC1Q6VVB1 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
NHLRC1Q6VVB1 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NHLRC1Q6VVB1 RNU4-39P-201ENST00000362455 127 ntBASIC5.08□□□□□ -1.6
NHLRC1Q6VVB1 RNA5SP187-201ENST00000384400 119 ntBASIC5.08□□□□□ -1.6
NHLRC1Q6VVB1 MIR323B-201ENST00000385269 82 ntBASIC5.08□□□□□ -1.6
NHLRC1Q6VVB1 MT-TP-201ENST00000387461 68 ntBASIC5.08□□□□□ -1.6
NHLRC1Q6VVB1 AC087752.1-201ENST00000391360 558 ntBASIC5.08□□□□□ -1.6
NHLRC1Q6VVB1 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.08□□□□□ -1.6
NHLRC1Q6VVB1 RN7SKP240-201ENST00000410583 375 ntBASIC5.08□□□□□ -1.6
NHLRC1Q6VVB1 AC096921.1-201ENST00000411661 375 ntBASIC5.08□□□□□ -1.6
NHLRC1Q6VVB1 SLC20A1P1-201ENST00000413906 956 ntBASIC5.08□□□□□ -1.6
NHLRC1Q6VVB1 RNF10P1-201ENST00000418589 369 ntBASIC5.08□□□□□ -1.6
NHLRC1Q6VVB1 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.08□□□□□ -1.6
NHLRC1Q6VVB1 AC006065.1-201ENST00000422539 802 ntBASIC5.08□□□□□ -1.6
NHLRC1Q6VVB1 AC115283.1-201ENST00000427353 400 ntBASIC5.08□□□□□ -1.6
NHLRC1Q6VVB1 MTND4LP14-201ENST00000429447 288 ntBASIC5.08□□□□□ -1.6
NHLRC1Q6VVB1 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC5.08□□□□□ -1.6
NHLRC1Q6VVB1 AC245517.2-201ENST00000442890 346 ntBASIC5.08□□□□□ -1.6
NHLRC1Q6VVB1 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.08□□□□□ -1.6
NHLRC1Q6VVB1 SNORD125-201ENST00000459538 96 ntBASIC5.08□□□□□ -1.6
NHLRC1Q6VVB1 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.08□□□□□ -1.6
NHLRC1Q6VVB1 RPS23P6-201ENST00000466136 431 ntBASIC5.08□□□□□ -1.6
NHLRC1Q6VVB1 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC5.08□□□□□ -1.6
NHLRC1Q6VVB1 RPS3AP15-201ENST00000483874 781 ntBASIC5.08□□□□□ -1.6
NHLRC1Q6VVB1 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.08□□□□□ -1.6
NHLRC1Q6VVB1 NENFP3-201ENST00000503735 313 ntBASIC5.08□□□□□ -1.6
NHLRC1Q6VVB1 MTHFD2P4-201ENST00000515074 1025 ntBASIC5.08□□□□□ -1.6
NHLRC1Q6VVB1 RN7SKP253-201ENST00000516424 309 ntBASIC5.08□□□□□ -1.6
NHLRC1Q6VVB1 RNU6-889P-201ENST00000517189 103 ntBASIC5.08□□□□□ -1.6
NHLRC1Q6VVB1 IGLV3-24-201ENST00000517477 197 ntBASIC5.08□□□□□ -1.6
NHLRC1Q6VVB1 IGHVII-60-1-201ENST00000519079 256 ntBASIC5.08□□□□□ -1.6
NHLRC1Q6VVB1 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC5.08□□□□□ -1.6
NHLRC1Q6VVB1 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.08□□□□□ -1.6
NHLRC1Q6VVB1 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.08□□□□□ -1.6
NHLRC1Q6VVB1 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.08□□□□□ -1.6
NHLRC1Q6VVB1 AGGF1P7-201ENST00000562369 913 ntBASIC5.08□□□□□ -1.6
NHLRC1Q6VVB1 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.08□□□□□ -1.6
NHLRC1Q6VVB1 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.08□□□□□ -1.6
NHLRC1Q6VVB1 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.08□□□□□ -1.6
NHLRC1Q6VVB1 AC027216.1-201ENST00000577726 685 ntBASIC5.08□□□□□ -1.6
NHLRC1Q6VVB1 AC067773.1-201ENST00000603284 1094 ntBASIC5.08□□□□□ -1.6
NHLRC1Q6VVB1 RN7SL544P-201ENST00000617232 284 ntBASIC5.08□□□□□ -1.6
NHLRC1Q6VVB1 AP005431.1-201ENST00000618479 319 ntBASIC5.08□□□□□ -1.6
NHLRC1Q6VVB1 RN7SL763P-201ENST00000620922 284 ntBASIC5.08□□□□□ -1.6
NHLRC1Q6VVB1 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.08□□□□□ -1.6
NHLRC1Q6VVB1 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.08□□□□□ -1.6
NHLRC1Q6VVB1 AC145207.9-201ENST00000623802 325 ntBASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms