Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 LARS-201ENST00000274562 2213 ntTSL 2 BASIC4.7□□□□□ -1.66
ANKRD55Q3KP44 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
ANKRD55Q3KP44 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
ANKRD55Q3KP44 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
ANKRD55Q3KP44 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
ANKRD55Q3KP44 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC4.7□□□□□ -1.66
ANKRD55Q3KP44 AC073136.1-201ENST00000449426 2884 ntBASIC4.7□□□□□ -1.66
ANKRD55Q3KP44 RNA5SP110-201ENST00000362638 115 ntBASIC4.7□□□□□ -1.66
ANKRD55Q3KP44 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
ANKRD55Q3KP44 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
ANKRD55Q3KP44 VDAC2P1-201ENST00000399358 958 ntBASIC4.7□□□□□ -1.66
ANKRD55Q3KP44 YWHAZP6-201ENST00000399764 738 ntBASIC4.7□□□□□ -1.66
ANKRD55Q3KP44 RNA5SP296-201ENST00000410523 111 ntBASIC4.7□□□□□ -1.66
ANKRD55Q3KP44 HSD17B7P1-201ENST00000412419 1017 ntBASIC4.7□□□□□ -1.66
ANKRD55Q3KP44 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC4.7□□□□□ -1.66
ANKRD55Q3KP44 FAM204CP-201ENST00000424489 642 ntBASIC4.7□□□□□ -1.66
ANKRD55Q3KP44 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC4.7□□□□□ -1.66
ANKRD55Q3KP44 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC4.7□□□□□ -1.66
ANKRD55Q3KP44 TRIM60P16-201ENST00000444048 694 ntBASIC4.7□□□□□ -1.66
ANKRD55Q3KP44 AL589765.3-201ENST00000446084 462 ntBASIC4.7□□□□□ -1.66
ANKRD55Q3KP44 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC4.7□□□□□ -1.66
ANKRD55Q3KP44 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.7□□□□□ -1.66
ANKRD55Q3KP44 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC4.7□□□□□ -1.66
ANKRD55Q3KP44 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.7□□□□□ -1.66
ANKRD55Q3KP44 AC023245.1-201ENST00000468501 517 ntBASIC4.7□□□□□ -1.66
ANKRD55Q3KP44 UBFD1P1-201ENST00000473259 814 ntBASIC4.7□□□□□ -1.66
ANKRD55Q3KP44 RPL12P30-201ENST00000488389 499 ntBASIC4.7□□□□□ -1.66
ANKRD55Q3KP44 EIF3LP3-201ENST00000495197 822 ntBASIC4.7□□□□□ -1.66
ANKRD55Q3KP44 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC4.7□□□□□ -1.66
ANKRD55Q3KP44 AC091874.2-201ENST00000505889 720 ntBASIC4.7□□□□□ -1.66
ANKRD55Q3KP44 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC4.7□□□□□ -1.66
ANKRD55Q3KP44 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC4.7□□□□□ -1.66
ANKRD55Q3KP44 AC021193.1-201ENST00000511607 420 ntBASIC4.7□□□□□ -1.66
ANKRD55Q3KP44 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC4.7□□□□□ -1.66
ANKRD55Q3KP44 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
ANKRD55Q3KP44 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.7□□□□□ -1.66
ANKRD55Q3KP44 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.7□□□□□ -1.66
ANKRD55Q3KP44 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC4.7□□□□□ -1.66
ANKRD55Q3KP44 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC4.7□□□□□ -1.66
ANKRD55Q3KP44 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC4.7□□□□□ -1.66
ANKRD55Q3KP44 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC4.7□□□□□ -1.66
ANKRD55Q3KP44 AL845552.1-201ENST00000556820 323 ntBASIC4.7□□□□□ -1.66
ANKRD55Q3KP44 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC4.7□□□□□ -1.66
ANKRD55Q3KP44 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
ANKRD55Q3KP44 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC4.7□□□□□ -1.66
ANKRD55Q3KP44 MIR4502-201ENST00000580432 81 ntBASIC4.7□□□□□ -1.66
ANKRD55Q3KP44 MIR7853-201ENST00000584820 132 ntBASIC4.7□□□□□ -1.66
ANKRD55Q3KP44 AC068020.1-201ENST00000594215 661 ntBASIC4.7□□□□□ -1.66
ANKRD55Q3KP44 AC130352.1-201ENST00000602979 661 ntBASIC4.7□□□□□ -1.66
ANKRD55Q3KP44 KATNBL1P1-201ENST00000605192 748 ntBASIC4.7□□□□□ -1.66
ANKRD55Q3KP44 AL683826.1-201ENST00000624104 627 ntBASIC4.7□□□□□ -1.66
ANKRD55Q3KP44 AC073593.1-201ENST00000624500 411 ntBASIC4.7□□□□□ -1.66
ANKRD55Q3KP44 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC4.7□□□□□ -1.66
ANKRD55Q3KP44 5S_rRNA.29-201ENST00000641250 107 ntBASIC4.7□□□□□ -1.66
ANKRD55Q3KP44 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
ANKRD55Q3KP44 HSPD1P9-201ENST00000420325 1636 ntBASIC4.7□□□□□ -1.66
ANKRD55Q3KP44 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.7□□□□□ -1.66
ANKRD55Q3KP44 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
ANKRD55Q3KP44 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
ANKRD55Q3KP44 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
ANKRD55Q3KP44 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC4.7□□□□□ -1.66
ANKRD55Q3KP44 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
ANKRD55Q3KP44 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
ANKRD55Q3KP44 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
ANKRD55Q3KP44 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
ANKRD55Q3KP44 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
ANKRD55Q3KP44 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
ANKRD55Q3KP44 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
ANKRD55Q3KP44 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
ANKRD55Q3KP44 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC4.69□□□□□ -1.66
ANKRD55Q3KP44 SELENOWP1-201ENST00000322792 252 ntBASIC4.69□□□□□ -1.66
ANKRD55Q3KP44 RNU1-134P-201ENST00000362935 165 ntBASIC4.69□□□□□ -1.66
ANKRD55Q3KP44 RNU1-65P-201ENST00000363919 148 ntBASIC4.69□□□□□ -1.66
ANKRD55Q3KP44 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
ANKRD55Q3KP44 RNU6-225P-201ENST00000384613 103 ntBASIC4.69□□□□□ -1.66
ANKRD55Q3KP44 MIR130A-201ENST00000385274 89 ntBASIC4.69□□□□□ -1.66
ANKRD55Q3KP44 RNU2-50P-201ENST00000410494 143 ntBASIC4.69□□□□□ -1.66
ANKRD55Q3KP44 NPM1P40-201ENST00000412758 733 ntBASIC4.69□□□□□ -1.66
ANKRD55Q3KP44 RPL35AP3-201ENST00000414680 288 ntBASIC4.69□□□□□ -1.66
ANKRD55Q3KP44 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC4.69□□□□□ -1.66
ANKRD55Q3KP44 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC4.69□□□□□ -1.66
ANKRD55Q3KP44 AC130360.1-201ENST00000425489 1117 ntBASIC4.69□□□□□ -1.66
ANKRD55Q3KP44 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC4.69□□□□□ -1.66
ANKRD55Q3KP44 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC4.69□□□□□ -1.66
ANKRD55Q3KP44 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
ANKRD55Q3KP44 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.69□□□□□ -1.66
ANKRD55Q3KP44 MTCO1P57-201ENST00000432182 261 ntBASIC4.69□□□□□ -1.66
ANKRD55Q3KP44 TMEM183AP1-205ENST00000432739 290 ntBASIC4.69□□□□□ -1.66
ANKRD55Q3KP44 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC4.69□□□□□ -1.66
ANKRD55Q3KP44 AC073465.2-201ENST00000440938 498 ntBASIC4.69□□□□□ -1.66
ANKRD55Q3KP44 AC114878.1-201ENST00000441166 358 ntBASIC4.69□□□□□ -1.66
ANKRD55Q3KP44 MTND2P3-201ENST00000452458 470 ntBASIC4.69□□□□□ -1.66
ANKRD55Q3KP44 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC4.69□□□□□ -1.66
ANKRD55Q3KP44 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.69□□□□□ -1.66
ANKRD55Q3KP44 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC4.69□□□□□ -1.66
ANKRD55Q3KP44 ACTR6P1-201ENST00000514311 1104 ntBASIC4.69□□□□□ -1.66
ANKRD55Q3KP44 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC4.69□□□□□ -1.66
ANKRD55Q3KP44 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC4.69□□□□□ -1.66
ANKRD55Q3KP44 AC011853.1-201ENST00000518911 454 ntBASIC4.69□□□□□ -1.66
ANKRD55Q3KP44 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 170 ms