Protein–RNA interactions for Protein: Q2M329

CCDC96, Coiled-coil domain-containing protein 96, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC96Q2M329 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC6.53□□□□□ -1.36
CCDC96Q2M329 OR51C1P-201ENST00000608504 942 ntBASIC6.53□□□□□ -1.36
CCDC96Q2M329 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC6.53□□□□□ -1.36
CCDC96Q2M329 AC007204.2-201ENST00000615022 616 ntBASIC6.53□□□□□ -1.36
CCDC96Q2M329 MIR8080-201ENST00000622224 89 ntBASIC6.53□□□□□ -1.36
CCDC96Q2M329 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
CCDC96Q2M329 AC000095.2-202ENST00000637415 154 ntBASIC6.53□□□□□ -1.36
CCDC96Q2M329 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC96Q2M329 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC96Q2M329 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC96Q2M329 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC96Q2M329 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC6.53□□□□□ -1.36
CCDC96Q2M329 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC96Q2M329 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC96Q2M329 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC96Q2M329 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC6.53□□□□□ -1.36
CCDC96Q2M329 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.36
CCDC96Q2M329 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC96Q2M329 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC6.52□□□□□ -1.37
CCDC96Q2M329 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
CCDC96Q2M329 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
CCDC96Q2M329 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC96Q2M329 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC96Q2M329 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
CCDC96Q2M329 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC96Q2M329 GAPDHP24-201ENST00000328713 983 ntBASIC6.52□□□□□ -1.37
CCDC96Q2M329 RNA5SP234-201ENST00000363916 119 ntBASIC6.52□□□□□ -1.37
CCDC96Q2M329 RNU4-2-201ENST00000365668 141 ntBASIC6.52□□□□□ -1.37
CCDC96Q2M329 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC6.52□□□□□ -1.37
CCDC96Q2M329 BPHL-201ENST00000380368 797 ntTSL 5 BASIC6.52□□□□□ -1.37
CCDC96Q2M329 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.52□□□□□ -1.37
CCDC96Q2M329 RNA5SP296-201ENST00000410523 111 ntBASIC6.52□□□□□ -1.37
CCDC96Q2M329 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC96Q2M329 MARK2P12-201ENST00000420129 585 ntBASIC6.52□□□□□ -1.37
CCDC96Q2M329 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC96Q2M329 FCF1P7-201ENST00000451185 558 ntBASIC6.52□□□□□ -1.37
CCDC96Q2M329 AC108751.3-201ENST00000461814 1020 ntBASIC6.52□□□□□ -1.37
CCDC96Q2M329 AC107015.1-201ENST00000466902 747 ntBASIC6.52□□□□□ -1.37
CCDC96Q2M329 RN7SL214P-201ENST00000487317 265 ntBASIC6.52□□□□□ -1.37
CCDC96Q2M329 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC6.52□□□□□ -1.37
CCDC96Q2M329 RPS27AP18-201ENST00000515536 459 ntBASIC6.52□□□□□ -1.37
CCDC96Q2M329 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC6.52□□□□□ -1.37
CCDC96Q2M329 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC6.52□□□□□ -1.37
CCDC96Q2M329 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC6.52□□□□□ -1.37
CCDC96Q2M329 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC6.52□□□□□ -1.37
CCDC96Q2M329 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC6.52□□□□□ -1.37
CCDC96Q2M329 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC6.52□□□□□ -1.37
CCDC96Q2M329 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC6.52□□□□□ -1.37
CCDC96Q2M329 AC122134.1-201ENST00000565664 1104 ntBASIC6.52□□□□□ -1.37
CCDC96Q2M329 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC6.52□□□□□ -1.37
CCDC96Q2M329 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC6.52□□□□□ -1.37
CCDC96Q2M329 MIR4675-201ENST00000577898 77 ntBASIC6.52□□□□□ -1.37
CCDC96Q2M329 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC6.52□□□□□ -1.37
CCDC96Q2M329 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC6.52□□□□□ -1.37
CCDC96Q2M329 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC6.52□□□□□ -1.37
CCDC96Q2M329 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC6.52□□□□□ -1.37
CCDC96Q2M329 AC012616.1-201ENST00000600294 197 ntBASIC6.52□□□□□ -1.37
CCDC96Q2M329 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC6.52□□□□□ -1.37
CCDC96Q2M329 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC96Q2M329 AC005840.5-201ENST00000619166 599 ntBASIC6.52□□□□□ -1.37
CCDC96Q2M329 AC002044.3-201ENST00000623314 541 ntBASIC6.52□□□□□ -1.37
CCDC96Q2M329 AC132068.1-201ENST00000623805 459 ntBASIC6.52□□□□□ -1.37
CCDC96Q2M329 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC6.52□□□□□ -1.37
CCDC96Q2M329 UGP2-232ENST00000640075 567 ntTSL 5 BASIC6.52□□□□□ -1.37
CCDC96Q2M329 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC96Q2M329 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC96Q2M329 BCORP1-203ENST00000513194 5093 ntBASIC6.52□□□□□ -1.37
CCDC96Q2M329 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC96Q2M329 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC6.51□□□□□ -1.37
CCDC96Q2M329 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
CCDC96Q2M329 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
CCDC96Q2M329 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CCDC96Q2M329 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC6.51□□□□□ -1.37
CCDC96Q2M329 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.51□□□□□ -1.37
CCDC96Q2M329 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
CCDC96Q2M329 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CCDC96Q2M329 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC6.51□□□□□ -1.37
CCDC96Q2M329 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
CCDC96Q2M329 RN7SKP162-201ENST00000363605 345 ntBASIC6.51□□□□□ -1.37
CCDC96Q2M329 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC6.51□□□□□ -1.37
CCDC96Q2M329 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
CCDC96Q2M329 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CCDC96Q2M329 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC6.51□□□□□ -1.37
CCDC96Q2M329 TMEM183AP1-205ENST00000432739 290 ntBASIC6.51□□□□□ -1.37
CCDC96Q2M329 HMGB3P10-201ENST00000434734 572 ntBASIC6.51□□□□□ -1.37
CCDC96Q2M329 OR6D1P-201ENST00000436165 939 ntBASIC6.51□□□□□ -1.37
CCDC96Q2M329 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC6.51□□□□□ -1.37
CCDC96Q2M329 AL589765.3-201ENST00000446084 462 ntBASIC6.51□□□□□ -1.37
CCDC96Q2M329 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CCDC96Q2M329 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC6.51□□□□□ -1.37
CCDC96Q2M329 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC6.51□□□□□ -1.37
CCDC96Q2M329 RN7SL177P-201ENST00000476596 299 ntBASIC6.51□□□□□ -1.37
CCDC96Q2M329 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC6.51□□□□□ -1.37
CCDC96Q2M329 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC6.51□□□□□ -1.37
CCDC96Q2M329 RN7SL629P-201ENST00000489622 285 ntBASIC6.51□□□□□ -1.37
CCDC96Q2M329 RPS4XP14-201ENST00000493072 781 ntBASIC6.51□□□□□ -1.37
CCDC96Q2M329 BX510359.5-201ENST00000515651 304 ntBASIC6.51□□□□□ -1.37
CCDC96Q2M329 AC022784.5-201ENST00000522241 437 ntBASIC6.51□□□□□ -1.37
CCDC96Q2M329 LECT2-205ENST00000522943 574 ntTSL 3 BASIC6.51□□□□□ -1.37
CCDC96Q2M329 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms