Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 RNU105B-201ENST00000364478 208 ntBASIC5.09□□□□□ -1.59
SCN1BQ07699 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.09□□□□□ -1.59
SCN1BQ07699 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC5.09□□□□□ -1.59
SCN1BQ07699 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
SCN1BQ07699 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
SCN1BQ07699 RNA5SP91-201ENST00000390902 119 ntBASIC5.09□□□□□ -1.59
SCN1BQ07699 U3.28-201ENST00000391249 210 ntBASIC5.09□□□□□ -1.59
SCN1BQ07699 VDAC2P1-201ENST00000399358 958 ntBASIC5.09□□□□□ -1.59
SCN1BQ07699 CHMP1B2P-201ENST00000399581 597 ntBASIC5.09□□□□□ -1.59
SCN1BQ07699 AL139805.1-201ENST00000407837 289 ntBASIC5.09□□□□□ -1.59
SCN1BQ07699 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.09□□□□□ -1.59
SCN1BQ07699 RPL35AP31-201ENST00000418340 337 ntBASIC5.09□□□□□ -1.59
SCN1BQ07699 AC048351.1-201ENST00000420064 602 ntBASIC5.09□□□□□ -1.59
SCN1BQ07699 RPS15AP30-201ENST00000420976 390 ntBASIC5.09□□□□□ -1.59
SCN1BQ07699 RPL12P12-201ENST00000424633 501 ntBASIC5.09□□□□□ -1.59
SCN1BQ07699 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC5.09□□□□□ -1.59
SCN1BQ07699 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.09□□□□□ -1.59
SCN1BQ07699 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.09□□□□□ -1.59
SCN1BQ07699 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC5.09□□□□□ -1.59
SCN1BQ07699 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.09□□□□□ -1.59
SCN1BQ07699 ARMC4P1-201ENST00000438905 707 ntBASIC5.09□□□□□ -1.59
SCN1BQ07699 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.09□□□□□ -1.59
SCN1BQ07699 AC064862.5-201ENST00000440618 334 ntBASIC5.09□□□□□ -1.59
SCN1BQ07699 MTCO3P43-201ENST00000440974 771 ntBASIC5.09□□□□□ -1.59
SCN1BQ07699 LINC02210-201ENST00000444561 288 ntBASIC5.09□□□□□ -1.59
SCN1BQ07699 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC5.09□□□□□ -1.59
SCN1BQ07699 AC097463.1-201ENST00000447288 481 ntBASIC5.09□□□□□ -1.59
SCN1BQ07699 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SCN1BQ07699 AL500527.1-201ENST00000448532 255 ntBASIC5.09□□□□□ -1.59
SCN1BQ07699 SDC4P-201ENST00000453285 601 ntBASIC5.09□□□□□ -1.59
SCN1BQ07699 AL354710.1-201ENST00000453641 246 ntBASIC5.09□□□□□ -1.59
SCN1BQ07699 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SCN1BQ07699 AC044810.1-201ENST00000480271 711 ntBASIC5.09□□□□□ -1.59
SCN1BQ07699 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC5.09□□□□□ -1.59
SCN1BQ07699 RPL29P23-201ENST00000486188 442 ntBASIC5.09□□□□□ -1.59
SCN1BQ07699 AC107398.1-201ENST00000486904 505 ntBASIC5.09□□□□□ -1.59
SCN1BQ07699 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.09□□□□□ -1.59
SCN1BQ07699 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC5.09□□□□□ -1.59
SCN1BQ07699 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.09□□□□□ -1.59
SCN1BQ07699 AC108103.1-201ENST00000511286 446 ntBASIC5.09□□□□□ -1.59
SCN1BQ07699 AC108120.2-201ENST00000512973 294 ntBASIC5.09□□□□□ -1.59
SCN1BQ07699 ZNF519P4-201ENST00000514008 125 ntBASIC5.09□□□□□ -1.59
SCN1BQ07699 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.09□□□□□ -1.59
SCN1BQ07699 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5.09□□□□□ -1.59
SCN1BQ07699 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.09□□□□□ -1.59
SCN1BQ07699 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC5.09□□□□□ -1.59
SCN1BQ07699 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SCN1BQ07699 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.09□□□□□ -1.59
SCN1BQ07699 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC5.09□□□□□ -1.59
SCN1BQ07699 NPM1P47-201ENST00000560843 856 ntBASIC5.09□□□□□ -1.59
SCN1BQ07699 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC5.09□□□□□ -1.59
SCN1BQ07699 AC127024.5-201ENST00000580085 462 ntBASIC5.09□□□□□ -1.59
SCN1BQ07699 AP005136.2-201ENST00000583253 1049 ntBASIC5.09□□□□□ -1.59
SCN1BQ07699 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC5.09□□□□□ -1.59
SCN1BQ07699 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SCN1BQ07699 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5.09□□□□□ -1.59
SCN1BQ07699 AC005479.3-201ENST00000602790 431 ntBASIC5.09□□□□□ -1.59
SCN1BQ07699 AL137072.1-201ENST00000603444 466 ntBASIC5.09□□□□□ -1.59
SCN1BQ07699 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC5.09□□□□□ -1.59
SCN1BQ07699 AL139124.1-201ENST00000609123 421 ntBASIC5.09□□□□□ -1.59
SCN1BQ07699 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC5.09□□□□□ -1.59
SCN1BQ07699 AL356490.1-201ENST00000623079 479 ntBASIC5.09□□□□□ -1.59
SCN1BQ07699 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC5.09□□□□□ -1.59
SCN1BQ07699 AL163152.1-201ENST00000642001 374 ntBASIC5.09□□□□□ -1.59
SCN1BQ07699 SAMMSON-227ENST00000642114 1199 ntBASIC5.09□□□□□ -1.59
SCN1BQ07699 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SCN1BQ07699 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SCN1BQ07699 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SCN1BQ07699 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
SCN1BQ07699 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.59
SCN1BQ07699 STX3-208ENST00000641815 3236 ntBASIC5.09□□□□□ -1.59
SCN1BQ07699 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
SCN1BQ07699 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.6
SCN1BQ07699 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
SCN1BQ07699 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.6
SCN1BQ07699 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
SCN1BQ07699 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.09□□□□□ -1.6
SCN1BQ07699 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
SCN1BQ07699 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
SCN1BQ07699 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
SCN1BQ07699 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SCN1BQ07699 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SCN1BQ07699 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.08□□□□□ -1.6
SCN1BQ07699 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.08□□□□□ -1.6
SCN1BQ07699 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SCN1BQ07699 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SCN1BQ07699 AC009313.2-201ENST00000417893 1941 ntBASIC5.08□□□□□ -1.6
SCN1BQ07699 SNORD115-48-201ENST00000364764 76 ntBASIC5.08□□□□□ -1.6
SCN1BQ07699 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SCN1BQ07699 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
SCN1BQ07699 AC096921.1-201ENST00000411661 375 ntBASIC5.08□□□□□ -1.6
SCN1BQ07699 CTSL3P-202ENST00000412179 788 ntBASIC5.08□□□□□ -1.6
SCN1BQ07699 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SCN1BQ07699 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.08□□□□□ -1.6
SCN1BQ07699 MTND4P24-201ENST00000424002 397 ntBASIC5.08□□□□□ -1.6
SCN1BQ07699 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.08□□□□□ -1.6
SCN1BQ07699 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.08□□□□□ -1.6
SCN1BQ07699 RPSAP32-201ENST00000432681 526 ntBASIC5.08□□□□□ -1.6
SCN1BQ07699 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC5.08□□□□□ -1.6
SCN1BQ07699 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 190.3 ms