Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
H3F3AP84243 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
H3F3AP84243 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
H3F3AP84243 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
H3F3AP84243 AC009804.1-201ENST00000400949 179 ntBASIC4.82□□□□□ -1.64
H3F3AP84243 AL133388.1-201ENST00000404509 287 ntBASIC4.82□□□□□ -1.64
H3F3AP84243 AL390774.1-201ENST00000411924 246 ntBASIC4.82□□□□□ -1.64
H3F3AP84243 GNG5P5-201ENST00000420444 220 ntBASIC4.82□□□□□ -1.64
H3F3AP84243 AC017019.1-201ENST00000426129 261 ntBASIC4.82□□□□□ -1.64
H3F3AP84243 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
H3F3AP84243 DSTNP5-201ENST00000427921 523 ntBASIC4.82□□□□□ -1.64
H3F3AP84243 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC4.82□□□□□ -1.64
H3F3AP84243 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC4.82□□□□□ -1.64
H3F3AP84243 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC4.82□□□□□ -1.64
H3F3AP84243 MED28P3-201ENST00000444288 531 ntBASIC4.82□□□□□ -1.64
H3F3AP84243 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.82□□□□□ -1.64
H3F3AP84243 RN7SL447P-201ENST00000494711 245 ntBASIC4.82□□□□□ -1.64
H3F3AP84243 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC4.82□□□□□ -1.64
H3F3AP84243 IGKV2-18-201ENST00000522607 343 ntBASIC4.82□□□□□ -1.64
H3F3AP84243 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC4.82□□□□□ -1.64
H3F3AP84243 OR8G3P-201ENST00000533406 921 ntBASIC4.82□□□□□ -1.64
H3F3AP84243 AP004607.2-201ENST00000533949 322 ntBASIC4.82□□□□□ -1.64
H3F3AP84243 AC126177.5-201ENST00000549599 178 ntBASIC4.82□□□□□ -1.64
H3F3AP84243 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
H3F3AP84243 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC4.82□□□□□ -1.64
H3F3AP84243 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC4.82□□□□□ -1.64
H3F3AP84243 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC4.82□□□□□ -1.64
H3F3AP84243 AC107993.1-201ENST00000591343 684 ntBASIC4.82□□□□□ -1.64
H3F3AP84243 MIR6768-201ENST00000610734 72 ntBASIC4.82□□□□□ -1.64
H3F3AP84243 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
H3F3AP84243 AC079395.2-201ENST00000610982 737 ntBASIC4.82□□□□□ -1.64
H3F3AP84243 AL162574.1-201ENST00000615702 950 ntBASIC4.82□□□□□ -1.64
H3F3AP84243 AC109583.2-201ENST00000617367 129 ntBASIC4.82□□□□□ -1.64
H3F3AP84243 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC4.82□□□□□ -1.64
H3F3AP84243 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC4.82□□□□□ -1.64
H3F3AP84243 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC4.82□□□□□ -1.64
H3F3AP84243 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
H3F3AP84243 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC4.82□□□□□ -1.64
H3F3AP84243 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
H3F3AP84243 AC003973.3-201ENST00000624863 2822 ntBASIC4.82□□□□□ -1.64
H3F3AP84243 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC4.82□□□□□ -1.64
H3F3AP84243 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
H3F3AP84243 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
H3F3AP84243 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.81□□□□□ -1.64
H3F3AP84243 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC4.81□□□□□ -1.64
H3F3AP84243 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
H3F3AP84243 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC4.81□□□□□ -1.64
H3F3AP84243 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
H3F3AP84243 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
H3F3AP84243 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
H3F3AP84243 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
H3F3AP84243 RNA5SP339-201ENST00000390987 122 ntBASIC4.81□□□□□ -1.64
H3F3AP84243 RNA5SP487-201ENST00000410186 122 ntBASIC4.81□□□□□ -1.64
H3F3AP84243 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC4.81□□□□□ -1.64
H3F3AP84243 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC4.81□□□□□ -1.64
H3F3AP84243 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC4.81□□□□□ -1.64
H3F3AP84243 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC4.81□□□□□ -1.64
H3F3AP84243 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
H3F3AP84243 AC016772.1-201ENST00000444170 1261 ntBASIC4.81□□□□□ -1.64
H3F3AP84243 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC4.81□□□□□ -1.64
H3F3AP84243 NPM1P19-201ENST00000450070 712 ntBASIC4.81□□□□□ -1.64
H3F3AP84243 AC007386.1-201ENST00000455212 582 ntBASIC4.81□□□□□ -1.64
H3F3AP84243 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
H3F3AP84243 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
H3F3AP84243 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
H3F3AP84243 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC4.81□□□□□ -1.64
H3F3AP84243 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.81□□□□□ -1.64
H3F3AP84243 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC4.81□□□□□ -1.64
H3F3AP84243 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
H3F3AP84243 MIR3176-201ENST00000582210 90 ntBASIC4.81□□□□□ -1.64
H3F3AP84243 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC4.81□□□□□ -1.64
H3F3AP84243 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC4.81□□□□□ -1.64
H3F3AP84243 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC4.81□□□□□ -1.64
H3F3AP84243 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC4.81□□□□□ -1.64
H3F3AP84243 METTL15-211ENST00000634762 718 ntTSL 5 BASIC4.81□□□□□ -1.64
H3F3AP84243 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
H3F3AP84243 UOX-205ENST00000640983 544 ntTSL 4 BASIC4.81□□□□□ -1.64
H3F3AP84243 SAMMSON-209ENST00000641222 1100 ntBASIC4.81□□□□□ -1.64
H3F3AP84243 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
H3F3AP84243 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
H3F3AP84243 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
H3F3AP84243 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
H3F3AP84243 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
H3F3AP84243 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
H3F3AP84243 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
H3F3AP84243 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.81□□□□□ -1.64
H3F3AP84243 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC4.81□□□□□ -1.64
H3F3AP84243 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.81□□□□□ -1.64
H3F3AP84243 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
H3F3AP84243 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC4.8□□□□□ -1.64
H3F3AP84243 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
H3F3AP84243 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
H3F3AP84243 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
H3F3AP84243 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
H3F3AP84243 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
H3F3AP84243 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC4.8□□□□□ -1.64
H3F3AP84243 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
H3F3AP84243 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
H3F3AP84243 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
H3F3AP84243 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms