Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
TPM4P67936 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
TPM4P67936 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
TPM4P67936 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
TPM4P67936 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC5.91□□□□□ -1.46
TPM4P67936 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
TPM4P67936 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.91□□□□□ -1.46
TPM4P67936 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
TPM4P67936 OR55B1P-203ENST00000641518 2602 ntBASIC5.91□□□□□ -1.46
TPM4P67936 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.91□□□□□ -1.46
TPM4P67936 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.91□□□□□ -1.46
TPM4P67936 AC005294.1-201ENST00000355509 281 ntBASIC5.91□□□□□ -1.46
TPM4P67936 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC5.91□□□□□ -1.46
TPM4P67936 MIR375-201ENST00000362103 64 ntBASIC5.91□□□□□ -1.46
TPM4P67936 RNU4-2-201ENST00000365668 141 ntBASIC5.91□□□□□ -1.46
TPM4P67936 MIR589-201ENST00000385238 99 ntBASIC5.91□□□□□ -1.46
TPM4P67936 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.91□□□□□ -1.46
TPM4P67936 MTND6P12-201ENST00000428247 522 ntBASIC5.91□□□□□ -1.46
TPM4P67936 AL157385.1-201ENST00000446973 268 ntBASIC5.91□□□□□ -1.46
TPM4P67936 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.91□□□□□ -1.46
TPM4P67936 BX842559.2-201ENST00000451418 605 ntBASIC5.91□□□□□ -1.46
TPM4P67936 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC5.91□□□□□ -1.46
TPM4P67936 AC090589.1-201ENST00000473109 362 ntBASIC5.91□□□□□ -1.46
TPM4P67936 AC114781.3-201ENST00000512083 142 ntBASIC5.91□□□□□ -1.46
TPM4P67936 AC027369.2-201ENST00000528030 440 ntBASIC5.91□□□□□ -1.46
TPM4P67936 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.91□□□□□ -1.46
TPM4P67936 RBM22P12-201ENST00000567098 1255 ntBASIC5.91□□□□□ -1.46
TPM4P67936 AP001496.3-201ENST00000580230 913 ntBASIC5.91□□□□□ -1.46
TPM4P67936 AC005479.3-201ENST00000602790 431 ntBASIC5.91□□□□□ -1.46
TPM4P67936 AC005252.1-201ENST00000604518 1063 ntBASIC5.91□□□□□ -1.46
TPM4P67936 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.91□□□□□ -1.46
TPM4P67936 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
TPM4P67936 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.91□□□□□ -1.46
TPM4P67936 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
TPM4P67936 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
TPM4P67936 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
TPM4P67936 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
TPM4P67936 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
TPM4P67936 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
TPM4P67936 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
TPM4P67936 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
TPM4P67936 AC114786.1-201ENST00000512892 1415 ntBASIC5.91□□□□□ -1.46
TPM4P67936 SCARNA15-201ENST00000607520 4325 ntBASIC5.9□□□□□ -1.46
TPM4P67936 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
TPM4P67936 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
TPM4P67936 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.46
TPM4P67936 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
TPM4P67936 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
TPM4P67936 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
TPM4P67936 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
TPM4P67936 AC020633.1-201ENST00000468439 2247 ntBASIC5.9□□□□□ -1.46
TPM4P67936 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
TPM4P67936 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC5.9□□□□□ -1.46
TPM4P67936 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
TPM4P67936 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
TPM4P67936 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
TPM4P67936 RNU1-65P-201ENST00000363919 148 ntBASIC5.9□□□□□ -1.46
TPM4P67936 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
TPM4P67936 HMGB1P20-201ENST00000402555 677 ntBASIC5.9□□□□□ -1.46
TPM4P67936 AC245060.4-201ENST00000413293 1121 ntBASIC5.9□□□□□ -1.46
TPM4P67936 AL133173.1-201ENST00000423458 397 ntBASIC5.9□□□□□ -1.46
TPM4P67936 NANOGP4-201ENST00000427230 913 ntBASIC5.9□□□□□ -1.46
TPM4P67936 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.9□□□□□ -1.46
TPM4P67936 RN7SL189P-201ENST00000468631 289 ntBASIC5.9□□□□□ -1.46
TPM4P67936 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC5.9□□□□□ -1.46
TPM4P67936 HMGB1P44-201ENST00000508597 572 ntBASIC5.9□□□□□ -1.46
TPM4P67936 CASP1P2-201ENST00000526830 1258 ntBASIC5.9□□□□□ -1.46
TPM4P67936 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.9□□□□□ -1.46
TPM4P67936 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.9□□□□□ -1.46
TPM4P67936 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC5.9□□□□□ -1.46
TPM4P67936 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC5.9□□□□□ -1.46
TPM4P67936 LINC00556-201ENST00000569603 412 ntBASIC5.9□□□□□ -1.46
TPM4P67936 AC011840.5-201ENST00000582125 771 ntBASIC5.9□□□□□ -1.46
TPM4P67936 AC011626.1-201ENST00000604710 562 ntBASIC5.9□□□□□ -1.46
TPM4P67936 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC5.9□□□□□ -1.46
TPM4P67936 BX005214.3-202ENST00000619809 325 ntBASIC5.9□□□□□ -1.46
TPM4P67936 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.9□□□□□ -1.46
TPM4P67936 TEX41-293ENST00000630451 690 ntTSL 5 BASIC5.9□□□□□ -1.46
TPM4P67936 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.46
TPM4P67936 AC099654.11-201ENST00000638857 294 ntBASIC5.9□□□□□ -1.46
TPM4P67936 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.9□□□□□ -1.47
TPM4P67936 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
TPM4P67936 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.9□□□□□ -1.47
TPM4P67936 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
TPM4P67936 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
TPM4P67936 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.9□□□□□ -1.47
TPM4P67936 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
TPM4P67936 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.9□□□□□ -1.47
TPM4P67936 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
TPM4P67936 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
TPM4P67936 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.89□□□□□ -1.47
TPM4P67936 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
TPM4P67936 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
TPM4P67936 AL359643.1-201ENST00000404109 423 ntBASIC5.89□□□□□ -1.47
TPM4P67936 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC5.89□□□□□ -1.47
TPM4P67936 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.89□□□□□ -1.47
TPM4P67936 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.89□□□□□ -1.47
TPM4P67936 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.89□□□□□ -1.47
TPM4P67936 AL161722.2-201ENST00000434731 981 ntBASIC5.89□□□□□ -1.47
TPM4P67936 GSTM5P1-201ENST00000434751 660 ntBASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms