Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CDH6P55285 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CDH6P55285 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
CDH6P55285 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CDH6P55285 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CDH6P55285 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CDH6P55285 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CDH6P55285 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CDH6P55285 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.56□□□□□ -1.52
CDH6P55285 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CDH6P55285 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CDH6P55285 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.55□□□□□ -1.52
CDH6P55285 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CDH6P55285 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
CDH6P55285 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CDH6P55285 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CDH6P55285 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
CDH6P55285 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.55□□□□□ -1.52
CDH6P55285 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CDH6P55285 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CDH6P55285 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.55□□□□□ -1.52
CDH6P55285 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.55□□□□□ -1.52
CDH6P55285 HSPA8P15-201ENST00000401676 786 ntBASIC5.55□□□□□ -1.52
CDH6P55285 OR4K12P-201ENST00000406538 961 ntBASIC5.55□□□□□ -1.52
CDH6P55285 HYALP1-201ENST00000417674 1279 ntBASIC5.55□□□□□ -1.52
CDH6P55285 NAP1L4P2-201ENST00000425958 899 ntBASIC5.55□□□□□ -1.52
CDH6P55285 AC124944.2-201ENST00000429866 1242 ntBASIC5.55□□□□□ -1.52
CDH6P55285 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.55□□□□□ -1.52
CDH6P55285 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.55□□□□□ -1.52
CDH6P55285 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.55□□□□□ -1.52
CDH6P55285 GAPDHP25-201ENST00000447061 1001 ntBASIC5.55□□□□□ -1.52
CDH6P55285 AC058823.1-201ENST00000485315 474 ntBASIC5.55□□□□□ -1.52
CDH6P55285 AL136038.1-201ENST00000497246 351 ntBASIC5.55□□□□□ -1.52
CDH6P55285 IMPA1P1-201ENST00000510718 842 ntBASIC5.55□□□□□ -1.52
CDH6P55285 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.55□□□□□ -1.52
CDH6P55285 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.55□□□□□ -1.52
CDH6P55285 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.55□□□□□ -1.52
CDH6P55285 RBM22P1-201ENST00000578589 1214 ntBASIC5.55□□□□□ -1.52
CDH6P55285 AL589674.2-201ENST00000604304 337 ntBASIC5.55□□□□□ -1.52
CDH6P55285 AC026367.3-201ENST00000619032 590 ntBASIC5.55□□□□□ -1.52
CDH6P55285 MIR8080-201ENST00000622224 89 ntBASIC5.55□□□□□ -1.52
CDH6P55285 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CDH6P55285 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.55□□□□□ -1.52
CDH6P55285 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.55□□□□□ -1.52
CDH6P55285 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CDH6P55285 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CDH6P55285 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CDH6P55285 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
CDH6P55285 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
CDH6P55285 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.55□□□□□ -1.52
CDH6P55285 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CDH6P55285 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
CDH6P55285 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
CDH6P55285 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.54□□□□□ -1.52
CDH6P55285 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.54□□□□□ -1.52
CDH6P55285 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.54□□□□□ -1.52
CDH6P55285 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.54□□□□□ -1.52
CDH6P55285 AL034549.2-201ENST00000618285 3373 ntBASIC5.54□□□□□ -1.52
CDH6P55285 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CDH6P55285 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CDH6P55285 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.54□□□□□ -1.52
CDH6P55285 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CDH6P55285 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
CDH6P55285 OR9G4-201ENST00000302957 984 ntBASIC5.54□□□□□ -1.52
CDH6P55285 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.54□□□□□ -1.52
CDH6P55285 RNA5SP435-201ENST00000364044 108 ntBASIC5.54□□□□□ -1.52
CDH6P55285 SNORA48.4-201ENST00000391089 134 ntBASIC5.54□□□□□ -1.52
CDH6P55285 HSPD1P12-201ENST00000429127 1069 ntBASIC5.54□□□□□ -1.52
CDH6P55285 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.54□□□□□ -1.52
CDH6P55285 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.54□□□□□ -1.52
CDH6P55285 AC114982.2-201ENST00000461396 358 ntBASIC5.54□□□□□ -1.52
CDH6P55285 RN7SL423P-201ENST00000486202 304 ntBASIC5.54□□□□□ -1.52
CDH6P55285 AC022133.1-201ENST00000490961 571 ntBASIC5.54□□□□□ -1.52
CDH6P55285 RPS24P16-201ENST00000497294 392 ntBASIC5.54□□□□□ -1.52
CDH6P55285 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.54□□□□□ -1.52
CDH6P55285 AC138409.2-202ENST00000507274 458 ntBASIC5.54□□□□□ -1.52
CDH6P55285 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC5.54□□□□□ -1.52
CDH6P55285 IGLVIV-64-201ENST00000518581 301 ntBASIC5.54□□□□□ -1.52
CDH6P55285 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.54□□□□□ -1.52
CDH6P55285 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.54□□□□□ -1.52
CDH6P55285 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
CDH6P55285 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.54□□□□□ -1.52
CDH6P55285 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.54□□□□□ -1.52
CDH6P55285 SNORD95-201ENST00000579879 68 ntBASIC5.54□□□□□ -1.52
CDH6P55285 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.54□□□□□ -1.52
CDH6P55285 AL022394.1-201ENST00000606979 292 ntBASIC5.54□□□□□ -1.52
CDH6P55285 AC004477.3-201ENST00000614061 590 ntBASIC5.54□□□□□ -1.52
CDH6P55285 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.54□□□□□ -1.52
CDH6P55285 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CDH6P55285 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
CDH6P55285 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CDH6P55285 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.54□□□□□ -1.52
CDH6P55285 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
CDH6P55285 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CDH6P55285 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CDH6P55285 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
CDH6P55285 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
CDH6P55285 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CDH6P55285 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CDH6P55285 TOPORSLP1-201ENST00000467693 2102 ntBASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms