Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
NEK3P51956 AC083899.2-201ENST00000423285 1376 ntBASIC6.18□□□□□ -1.42
NEK3P51956 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
NEK3P51956 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
NEK3P51956 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
NEK3P51956 AP001284.1-201ENST00000528393 2118 ntBASIC6.17□□□□□ -1.42
NEK3P51956 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.17□□□□□ -1.42
NEK3P51956 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
NEK3P51956 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.17□□□□□ -1.42
NEK3P51956 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC6.17□□□□□ -1.42
NEK3P51956 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
NEK3P51956 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
NEK3P51956 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.17□□□□□ -1.42
NEK3P51956 AL731532.1-201ENST00000623972 4236 ntBASIC6.17□□□□□ -1.42
NEK3P51956 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
NEK3P51956 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC6.17□□□□□ -1.42
NEK3P51956 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
NEK3P51956 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
NEK3P51956 RNU6-354P-201ENST00000383862 107 ntBASIC6.17□□□□□ -1.42
NEK3P51956 RNU6-610P-201ENST00000384264 107 ntBASIC6.17□□□□□ -1.42
NEK3P51956 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
NEK3P51956 AC245096.1-201ENST00000413104 546 ntBASIC6.17□□□□□ -1.42
NEK3P51956 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC6.17□□□□□ -1.42
NEK3P51956 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC6.17□□□□□ -1.42
NEK3P51956 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC6.17□□□□□ -1.42
NEK3P51956 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC6.17□□□□□ -1.42
NEK3P51956 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.17□□□□□ -1.42
NEK3P51956 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC6.17□□□□□ -1.42
NEK3P51956 RPS3AP38-201ENST00000435889 763 ntBASIC6.17□□□□□ -1.42
NEK3P51956 TRIM60P16-201ENST00000444048 694 ntBASIC6.17□□□□□ -1.42
NEK3P51956 FTLP8-201ENST00000446770 267 ntBASIC6.17□□□□□ -1.42
NEK3P51956 CFL1P4-201ENST00000451536 498 ntBASIC6.17□□□□□ -1.42
NEK3P51956 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
NEK3P51956 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC6.17□□□□□ -1.42
NEK3P51956 FCF1P6-201ENST00000456841 595 ntBASIC6.17□□□□□ -1.42
NEK3P51956 ATP5G1P3-201ENST00000463301 410 ntBASIC6.17□□□□□ -1.42
NEK3P51956 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC6.17□□□□□ -1.42
NEK3P51956 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
NEK3P51956 TRIM77BP-201ENST00000524985 1119 ntBASIC6.17□□□□□ -1.42
NEK3P51956 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC6.17□□□□□ -1.42
NEK3P51956 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC6.17□□□□□ -1.42
NEK3P51956 AC125612.1-201ENST00000547580 377 ntBASIC6.17□□□□□ -1.42
NEK3P51956 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC6.17□□□□□ -1.42
NEK3P51956 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC6.17□□□□□ -1.42
NEK3P51956 GLRXP2-201ENST00000555594 321 ntBASIC6.17□□□□□ -1.42
NEK3P51956 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
NEK3P51956 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC6.17□□□□□ -1.42
NEK3P51956 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC6.17□□□□□ -1.42
NEK3P51956 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC6.17□□□□□ -1.42
NEK3P51956 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC6.17□□□□□ -1.42
NEK3P51956 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC6.17□□□□□ -1.42
NEK3P51956 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC6.17□□□□□ -1.42
NEK3P51956 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
NEK3P51956 AC108865.2-201ENST00000606881 432 ntBASIC6.17□□□□□ -1.42
NEK3P51956 AC015982.1-201ENST00000608113 465 ntBASIC6.17□□□□□ -1.42
NEK3P51956 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
NEK3P51956 AL096712.1-201ENST00000614561 159 ntBASIC6.17□□□□□ -1.42
NEK3P51956 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC6.17□□□□□ -1.42
NEK3P51956 AC000095.2-202ENST00000637415 154 ntBASIC6.17□□□□□ -1.42
NEK3P51956 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
NEK3P51956 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
NEK3P51956 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC6.17□□□□□ -1.42
NEK3P51956 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
NEK3P51956 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
NEK3P51956 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.17□□□□□ -1.42
NEK3P51956 CASC19-261ENST00000641853 1638 ntBASIC6.17□□□□□ -1.42
NEK3P51956 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6.17□□□□□ -1.42
NEK3P51956 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6.17□□□□□ -1.42
NEK3P51956 RBMY1HP-201ENST00000382759 1389 ntBASIC6.17□□□□□ -1.42
NEK3P51956 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
NEK3P51956 CCT8P1-201ENST00000413611 1657 ntBASIC6.17□□□□□ -1.42
NEK3P51956 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC6.17□□□□□ -1.42
NEK3P51956 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.17□□□□□ -1.42
NEK3P51956 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC6.17□□□□□ -1.42
NEK3P51956 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
NEK3P51956 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
NEK3P51956 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.16□□□□□ -1.42
NEK3P51956 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
NEK3P51956 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.16□□□□□ -1.42
NEK3P51956 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
NEK3P51956 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
NEK3P51956 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
NEK3P51956 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.16□□□□□ -1.42
NEK3P51956 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
NEK3P51956 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
NEK3P51956 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
NEK3P51956 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
NEK3P51956 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
NEK3P51956 RNU6-468P-201ENST00000384003 109 ntBASIC6.16□□□□□ -1.42
NEK3P51956 STAT4-203ENST00000409995 709 ntTSL 5 BASIC6.16□□□□□ -1.42
NEK3P51956 AL024507.1-201ENST00000412741 274 ntBASIC6.16□□□□□ -1.42
NEK3P51956 AC013410.2-201ENST00000422627 201 ntBASIC6.16□□□□□ -1.42
NEK3P51956 AL354692.1-201ENST00000423044 315 ntBASIC6.16□□□□□ -1.42
NEK3P51956 MGAT2P2-201ENST00000427194 797 ntBASIC6.16□□□□□ -1.42
NEK3P51956 AC093422.3-201ENST00000428506 305 ntBASIC6.16□□□□□ -1.42
NEK3P51956 ETF1P3-201ENST00000430422 1160 ntBASIC6.16□□□□□ -1.42
NEK3P51956 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC6.16□□□□□ -1.42
NEK3P51956 AC073410.1-201ENST00000435125 589 ntBASIC6.16□□□□□ -1.42
NEK3P51956 AC006994.1-201ENST00000438212 839 ntBASIC6.16□□□□□ -1.42
NEK3P51956 KRT8P51-201ENST00000438938 274 ntBASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms