Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 POF1B-202ENST00000373145 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
HOXC12P31275 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
HOXC12P31275 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC6.21□□□□□ -1.42
HOXC12P31275 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
HOXC12P31275 UGT2B4-201ENST00000305107 2103 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
HOXC12P31275 U3.4-201ENST00000363352 213 ntBASIC6.21□□□□□ -1.42
HOXC12P31275 AC092634.1-201ENST00000366505 199 ntBASIC6.21□□□□□ -1.42
HOXC12P31275 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
HOXC12P31275 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
HOXC12P31275 MIR323B-201ENST00000385269 82 ntBASIC6.21□□□□□ -1.42
HOXC12P31275 GLS-204ENST00000409428 816 ntTSL 2 BASIC6.21□□□□□ -1.42
HOXC12P31275 RN7SKP268-201ENST00000411107 316 ntBASIC6.21□□□□□ -1.42
HOXC12P31275 RNU2-22P-201ENST00000411266 212 ntBASIC6.21□□□□□ -1.42
HOXC12P31275 UBE2V1P10-201ENST00000414685 269 ntBASIC6.21□□□□□ -1.42
HOXC12P31275 AC012462.2-201ENST00000414756 391 ntTSL 3 BASIC6.21□□□□□ -1.42
HOXC12P31275 CCR8-202ENST00000414803 1078 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
HOXC12P31275 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC6.21□□□□□ -1.42
HOXC12P31275 AC234781.4-201ENST00000419384 244 ntBASIC6.21□□□□□ -1.42
HOXC12P31275 GAPDHP49-201ENST00000421421 961 ntBASIC6.21□□□□□ -1.42
HOXC12P31275 RPL7P44-201ENST00000424827 742 ntBASIC6.21□□□□□ -1.42
HOXC12P31275 AP003385.1-201ENST00000426387 893 ntBASIC6.21□□□□□ -1.42
HOXC12P31275 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC6.21□□□□□ -1.42
HOXC12P31275 MIR181A1HG-202ENST00000432296 930 ntTSL 3 BASIC6.21□□□□□ -1.42
HOXC12P31275 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC6.21□□□□□ -1.42
HOXC12P31275 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC6.21□□□□□ -1.42
HOXC12P31275 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC6.21□□□□□ -1.42
HOXC12P31275 RNU6-956P-201ENST00000458868 103 ntBASIC6.21□□□□□ -1.42
HOXC12P31275 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC6.21□□□□□ -1.42
HOXC12P31275 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC6.21□□□□□ -1.42
HOXC12P31275 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC6.21□□□□□ -1.42
HOXC12P31275 MTATP6P22-201ENST00000507369 598 ntBASIC6.21□□□□□ -1.42
HOXC12P31275 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
HOXC12P31275 SCARNA6-201ENST00000515982 265 ntBASIC6.21□□□□□ -1.42
HOXC12P31275 CARSP2-201ENST00000520688 277 ntBASIC6.21□□□□□ -1.42
HOXC12P31275 AC106038.2-201ENST00000520706 568 ntBASIC6.21□□□□□ -1.42
HOXC12P31275 AC134698.4-201ENST00000523451 826 ntBASIC6.21□□□□□ -1.42
HOXC12P31275 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC6.21□□□□□ -1.42
HOXC12P31275 AP001803.1-201ENST00000525668 147 ntBASIC6.21□□□□□ -1.42
HOXC12P31275 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC6.21□□□□□ -1.42
HOXC12P31275 AC105233.3-201ENST00000531125 744 ntBASIC6.21□□□□□ -1.42
HOXC12P31275 AP000873.5-201ENST00000533906 236 ntBASIC6.21□□□□□ -1.42
HOXC12P31275 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC6.21□□□□□ -1.42
HOXC12P31275 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC6.21□□□□□ -1.42
HOXC12P31275 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
HOXC12P31275 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC6.21□□□□□ -1.42
HOXC12P31275 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC6.21□□□□□ -1.42
HOXC12P31275 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC6.21□□□□□ -1.42
HOXC12P31275 AC023827.2-201ENST00000566880 1061 ntBASIC6.21□□□□□ -1.42
HOXC12P31275 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC6.21□□□□□ -1.42
HOXC12P31275 LINC00556-201ENST00000569603 412 ntBASIC6.21□□□□□ -1.42
HOXC12P31275 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC6.21□□□□□ -1.42
HOXC12P31275 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC6.21□□□□□ -1.42
HOXC12P31275 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC6.21□□□□□ -1.42
HOXC12P31275 AC011453.2-201ENST00000603737 729 ntBASIC6.21□□□□□ -1.42
HOXC12P31275 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
HOXC12P31275 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC6.21□□□□□ -1.42
HOXC12P31275 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC6.21□□□□□ -1.42
HOXC12P31275 AC116165.2-201ENST00000616705 206 ntBASIC6.21□□□□□ -1.42
HOXC12P31275 AL356274.1-201ENST00000617064 410 ntBASIC6.21□□□□□ -1.42
HOXC12P31275 AL136981.2-201ENST00000617319 734 ntBASIC6.21□□□□□ -1.42
HOXC12P31275 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
HOXC12P31275 AL161420.1-201ENST00000619393 264 ntBASIC6.21□□□□□ -1.42
HOXC12P31275 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC6.21□□□□□ -1.42
HOXC12P31275 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
HOXC12P31275 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
HOXC12P31275 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
HOXC12P31275 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.42
HOXC12P31275 PSG1-203ENST00000403380 1722 ntTSL 2 BASIC6.21□□□□□ -1.42
HOXC12P31275 ZNF677-206ENST00000598513 3497 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
HOXC12P31275 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
HOXC12P31275 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
HOXC12P31275 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
HOXC12P31275 SIRPG-AS1-202ENST00000456177 2795 ntTSL 2 BASIC6.21□□□□□ -1.42
HOXC12P31275 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
HOXC12P31275 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
HOXC12P31275 SLC10A5P1-201ENST00000379063 1306 ntBASIC6.21□□□□□ -1.42
HOXC12P31275 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
HOXC12P31275 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
HOXC12P31275 AP001284.1-201ENST00000528393 2118 ntBASIC6.2□□□□□ -1.42
HOXC12P31275 AC109361.1-201ENST00000513220 3526 ntTSL 2 BASIC6.2□□□□□ -1.42
HOXC12P31275 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HOXC12P31275 LARS-212ENST00000510191 3737 ntTSL 2 BASIC6.2□□□□□ -1.42
HOXC12P31275 AC005618.1-201ENST00000606901 3148 ntBASIC6.2□□□□□ -1.42
HOXC12P31275 DPPA4-201ENST00000335658 2817 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
HOXC12P31275 HMGB1P5-201ENST00000255320 642 ntBASIC6.2□□□□□ -1.42
HOXC12P31275 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HOXC12P31275 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
HOXC12P31275 Y_RNA.517-201ENST00000384551 106 ntBASIC6.2□□□□□ -1.42
HOXC12P31275 AL590762.1-201ENST00000391782 432 ntBASIC6.2□□□□□ -1.42
HOXC12P31275 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HOXC12P31275 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC6.2□□□□□ -1.42
HOXC12P31275 VN1R12P-201ENST00000403778 876 ntBASIC6.2□□□□□ -1.42
HOXC12P31275 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
HOXC12P31275 AL136100.1-201ENST00000407696 330 ntBASIC6.2□□□□□ -1.42
HOXC12P31275 MIR1303-201ENST00000408625 86 ntBASIC6.2□□□□□ -1.42
HOXC12P31275 AL663109.1-201ENST00000411498 844 ntBASIC6.2□□□□□ -1.42
HOXC12P31275 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC6.2□□□□□ -1.42
HOXC12P31275 RPL7P8-201ENST00000411964 730 ntBASIC6.2□□□□□ -1.42
HOXC12P31275 CCDC148-AS1-201ENST00000412781 795 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HOXC12P31275 RPS15AP38-201ENST00000413110 372 ntBASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms