Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.68□□□□□ -1.66
CTLA4P16410 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.68□□□□□ -1.66
CTLA4P16410 AC126175.1-201ENST00000617041 758 ntBASIC4.68□□□□□ -1.66
CTLA4P16410 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC4.68□□□□□ -1.66
CTLA4P16410 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC4.68□□□□□ -1.66
CTLA4P16410 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CTLA4P16410 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CTLA4P16410 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC4.68□□□□□ -1.66
CTLA4P16410 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CTLA4P16410 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.67□□□□□ -1.66
CTLA4P16410 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CTLA4P16410 CASC19-248ENST00000641674 1356 ntBASIC4.67□□□□□ -1.66
CTLA4P16410 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
CTLA4P16410 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
CTLA4P16410 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
CTLA4P16410 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.67□□□□□ -1.66
CTLA4P16410 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CTLA4P16410 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC4.67□□□□□ -1.66
CTLA4P16410 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CTLA4P16410 OR9K1P-201ENST00000326513 941 ntBASIC4.67□□□□□ -1.66
CTLA4P16410 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CTLA4P16410 MIR105-1-201ENST00000385222 81 ntBASIC4.67□□□□□ -1.66
CTLA4P16410 RNU1-77P-201ENST00000390868 162 ntBASIC4.67□□□□□ -1.66
CTLA4P16410 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC4.67□□□□□ -1.66
CTLA4P16410 RPL21P67-201ENST00000402896 478 ntBASIC4.67□□□□□ -1.66
CTLA4P16410 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
CTLA4P16410 SNORA11.5-201ENST00000408163 128 ntBASIC4.67□□□□□ -1.66
CTLA4P16410 XIST-201ENST00000416330 750 ntTSL 2 BASIC4.67□□□□□ -1.66
CTLA4P16410 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.67□□□□□ -1.66
CTLA4P16410 AC079807.1-201ENST00000429993 481 ntBASIC4.67□□□□□ -1.66
CTLA4P16410 EIF4A1P6-201ENST00000448133 1210 ntBASIC4.67□□□□□ -1.66
CTLA4P16410 AC144530.1-201ENST00000452862 555 ntBASIC4.67□□□□□ -1.66
CTLA4P16410 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC4.67□□□□□ -1.66
CTLA4P16410 MTATP6P1-201ENST00000514057 681 ntBASIC4.67□□□□□ -1.66
CTLA4P16410 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC4.67□□□□□ -1.66
CTLA4P16410 RNA5SP373-201ENST00000517271 95 ntBASIC4.67□□□□□ -1.66
CTLA4P16410 AC100784.1-201ENST00000522790 310 ntBASIC4.67□□□□□ -1.66
CTLA4P16410 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC4.67□□□□□ -1.66
CTLA4P16410 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC4.67□□□□□ -1.66
CTLA4P16410 RPL10P14-201ENST00000565265 298 ntBASIC4.67□□□□□ -1.66
CTLA4P16410 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC4.67□□□□□ -1.66
CTLA4P16410 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC4.67□□□□□ -1.66
CTLA4P16410 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC4.67□□□□□ -1.66
CTLA4P16410 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
CTLA4P16410 AC125494.2-201ENST00000602431 657 ntBASIC4.67□□□□□ -1.66
CTLA4P16410 AC008814.1-201ENST00000603797 406 ntBASIC4.67□□□□□ -1.66
CTLA4P16410 SUGT1P3-202ENST00000604259 383 ntBASIC4.67□□□□□ -1.66
CTLA4P16410 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
CTLA4P16410 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CTLA4P16410 REV3L-214ENST00000619481 969 ntTSL 5 BASIC4.67□□□□□ -1.66
CTLA4P16410 AL357153.4-201ENST00000620487 1016 ntBASIC4.67□□□□□ -1.66
CTLA4P16410 AC016542.2-201ENST00000624201 619 ntBASIC4.67□□□□□ -1.66
CTLA4P16410 AC103703.1-201ENST00000634783 663 ntBASIC4.67□□□□□ -1.66
CTLA4P16410 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC4.67□□□□□ -1.66
CTLA4P16410 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
CTLA4P16410 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CTLA4P16410 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CTLA4P16410 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
CTLA4P16410 AC022417.1-201ENST00000624768 1303 ntBASIC4.67□□□□□ -1.66
CTLA4P16410 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
CTLA4P16410 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CTLA4P16410 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
CTLA4P16410 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CTLA4P16410 AC006210.2-201ENST00000367074 1545 ntBASIC4.67□□□□□ -1.66
CTLA4P16410 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC4.67□□□□□ -1.66
CTLA4P16410 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC4.66□□□□□ -1.66
CTLA4P16410 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.66□□□□□ -1.66
CTLA4P16410 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CTLA4P16410 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CTLA4P16410 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CTLA4P16410 AC005005.4-201ENST00000623789 16698 ntBASIC4.66□□□□□ -1.66
CTLA4P16410 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.66□□□□□ -1.66
CTLA4P16410 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CTLA4P16410 RN7SKP15-201ENST00000364742 309 ntBASIC4.66□□□□□ -1.66
CTLA4P16410 RNA5SP223-201ENST00000365174 120 ntBASIC4.66□□□□□ -1.66
CTLA4P16410 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CTLA4P16410 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC4.66□□□□□ -1.66
CTLA4P16410 RNA5SP339-201ENST00000390987 122 ntBASIC4.66□□□□□ -1.66
CTLA4P16410 RN7SKP293-201ENST00000411389 296 ntBASIC4.66□□□□□ -1.66
CTLA4P16410 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC4.66□□□□□ -1.66
CTLA4P16410 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC4.66□□□□□ -1.66
CTLA4P16410 AC046176.1-201ENST00000435260 1170 ntBASIC4.66□□□□□ -1.66
CTLA4P16410 GAPDHP58-201ENST00000438477 1006 ntBASIC4.66□□□□□ -1.66
CTLA4P16410 PCNPP2-201ENST00000441651 455 ntBASIC4.66□□□□□ -1.66
CTLA4P16410 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC4.66□□□□□ -1.66
CTLA4P16410 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC4.66□□□□□ -1.66
CTLA4P16410 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.66□□□□□ -1.66
CTLA4P16410 RPL7P45-201ENST00000455851 743 ntBASIC4.66□□□□□ -1.66
CTLA4P16410 RN7SL189P-201ENST00000468631 289 ntBASIC4.66□□□□□ -1.66
CTLA4P16410 RPL12P24-201ENST00000474907 486 ntBASIC4.66□□□□□ -1.66
CTLA4P16410 RN7SL547P-201ENST00000490793 290 ntBASIC4.66□□□□□ -1.66
CTLA4P16410 RN7SL447P-201ENST00000494711 245 ntBASIC4.66□□□□□ -1.66
CTLA4P16410 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC4.66□□□□□ -1.66
CTLA4P16410 MYL12BP2-201ENST00000503948 512 ntBASIC4.66□□□□□ -1.66
CTLA4P16410 RNU6-1334P-201ENST00000516032 105 ntBASIC4.66□□□□□ -1.66
CTLA4P16410 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC4.66□□□□□ -1.66
CTLA4P16410 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC4.66□□□□□ -1.66
CTLA4P16410 AC020978.7-201ENST00000575953 1187 ntBASIC4.66□□□□□ -1.66
CTLA4P16410 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CTLA4P16410 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms