Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PDGFRAP16234 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.48
PDGFRAP16234 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.77□□□□□ -1.48
PDGFRAP16234 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PDGFRAP16234 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PDGFRAP16234 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.77□□□□□ -1.49
PDGFRAP16234 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PDGFRAP16234 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PDGFRAP16234 AL359715.3-201ENST00000569267 2123 ntBASIC5.77□□□□□ -1.49
PDGFRAP16234 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
PDGFRAP16234 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PDGFRAP16234 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PDGFRAP16234 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC5.77□□□□□ -1.49
PDGFRAP16234 RN7SKP28-201ENST00000364770 305 ntBASIC5.77□□□□□ -1.49
PDGFRAP16234 NDUFB4P8-201ENST00000435351 367 ntBASIC5.77□□□□□ -1.49
PDGFRAP16234 AC012075.1-201ENST00000436549 580 ntBASIC5.77□□□□□ -1.49
PDGFRAP16234 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.77□□□□□ -1.49
PDGFRAP16234 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.77□□□□□ -1.49
PDGFRAP16234 AL390119.1-201ENST00000440329 312 ntBASIC5.77□□□□□ -1.49
PDGFRAP16234 ARAFP2-201ENST00000440565 559 ntBASIC5.77□□□□□ -1.49
PDGFRAP16234 AC019185.1-201ENST00000442718 389 ntBASIC5.77□□□□□ -1.49
PDGFRAP16234 AC092106.1-201ENST00000444291 373 ntBASIC5.77□□□□□ -1.49
PDGFRAP16234 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC5.77□□□□□ -1.49
PDGFRAP16234 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC5.77□□□□□ -1.49
PDGFRAP16234 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.77□□□□□ -1.49
PDGFRAP16234 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC5.77□□□□□ -1.49
PDGFRAP16234 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.77□□□□□ -1.49
PDGFRAP16234 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.77□□□□□ -1.49
PDGFRAP16234 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.77□□□□□ -1.49
PDGFRAP16234 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.77□□□□□ -1.49
PDGFRAP16234 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.77□□□□□ -1.49
PDGFRAP16234 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.77□□□□□ -1.49
PDGFRAP16234 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
PDGFRAP16234 AL121839.1-201ENST00000556233 1185 ntBASIC5.77□□□□□ -1.49
PDGFRAP16234 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PDGFRAP16234 AP005403.1-201ENST00000579720 229 ntBASIC5.77□□□□□ -1.49
PDGFRAP16234 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.77□□□□□ -1.49
PDGFRAP16234 AC012616.1-201ENST00000600294 197 ntBASIC5.77□□□□□ -1.49
PDGFRAP16234 AC009237.13-201ENST00000603193 276 ntBASIC5.77□□□□□ -1.49
PDGFRAP16234 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.77□□□□□ -1.49
PDGFRAP16234 MIR6133-201ENST00000617057 108 ntBASIC5.77□□□□□ -1.49
PDGFRAP16234 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.77□□□□□ -1.49
PDGFRAP16234 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.77□□□□□ -1.49
PDGFRAP16234 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.77□□□□□ -1.49
PDGFRAP16234 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.77□□□□□ -1.49
PDGFRAP16234 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PDGFRAP16234 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
PDGFRAP16234 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PDGFRAP16234 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
PDGFRAP16234 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PDGFRAP16234 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PDGFRAP16234 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
PDGFRAP16234 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.77□□□□□ -1.49
PDGFRAP16234 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
PDGFRAP16234 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.77□□□□□ -1.49
PDGFRAP16234 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.77□□□□□ -1.49
PDGFRAP16234 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PDGFRAP16234 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.76□□□□□ -1.49
PDGFRAP16234 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.76□□□□□ -1.49
PDGFRAP16234 AC083899.1-201ENST00000454465 3819 ntBASIC5.76□□□□□ -1.49
PDGFRAP16234 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.76□□□□□ -1.49
PDGFRAP16234 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.76□□□□□ -1.49
PDGFRAP16234 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.76□□□□□ -1.49
PDGFRAP16234 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.76□□□□□ -1.49
PDGFRAP16234 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.76□□□□□ -1.49
PDGFRAP16234 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
PDGFRAP16234 RN7SKP124-201ENST00000364730 341 ntBASIC5.76□□□□□ -1.49
PDGFRAP16234 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PDGFRAP16234 RN7SKP229-201ENST00000410465 302 ntBASIC5.76□□□□□ -1.49
PDGFRAP16234 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.76□□□□□ -1.49
PDGFRAP16234 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.76□□□□□ -1.49
PDGFRAP16234 SNRPFP2-201ENST00000440710 251 ntBASIC5.76□□□□□ -1.49
PDGFRAP16234 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC5.76□□□□□ -1.49
PDGFRAP16234 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.76□□□□□ -1.49
PDGFRAP16234 AC021106.1-201ENST00000509020 1058 ntBASIC5.76□□□□□ -1.49
PDGFRAP16234 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.76□□□□□ -1.49
PDGFRAP16234 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
PDGFRAP16234 AC079064.1-201ENST00000528365 362 ntBASIC5.76□□□□□ -1.49
PDGFRAP16234 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.76□□□□□ -1.49
PDGFRAP16234 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.76□□□□□ -1.49
PDGFRAP16234 FAM60CP-201ENST00000591086 664 ntBASIC5.76□□□□□ -1.49
PDGFRAP16234 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.76□□□□□ -1.49
PDGFRAP16234 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC5.76□□□□□ -1.49
PDGFRAP16234 AC132068.1-201ENST00000623805 459 ntBASIC5.76□□□□□ -1.49
PDGFRAP16234 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.76□□□□□ -1.49
PDGFRAP16234 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
PDGFRAP16234 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
PDGFRAP16234 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
PDGFRAP16234 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PDGFRAP16234 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PDGFRAP16234 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.76□□□□□ -1.49
PDGFRAP16234 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PDGFRAP16234 AC245100.2-201ENST00000454544 1679 ntBASIC5.75□□□□□ -1.49
PDGFRAP16234 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PDGFRAP16234 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
PDGFRAP16234 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
PDGFRAP16234 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PDGFRAP16234 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
PDGFRAP16234 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
PDGFRAP16234 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms