Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.9□□□□□ -1.46
COL11A1P12107 AC005000.1-201ENST00000536192 288 ntBASIC5.9□□□□□ -1.46
COL11A1P12107 ELOCP28-201ENST00000590044 317 ntBASIC5.9□□□□□ -1.46
COL11A1P12107 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
COL11A1P12107 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
COL11A1P12107 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
COL11A1P12107 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC5.9□□□□□ -1.46
COL11A1P12107 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
COL11A1P12107 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
COL11A1P12107 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
COL11A1P12107 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
COL11A1P12107 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.9□□□□□ -1.46
COL11A1P12107 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
COL11A1P12107 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
COL11A1P12107 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.9□□□□□ -1.47
COL11A1P12107 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
COL11A1P12107 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
COL11A1P12107 CEP290-207ENST00000552810 7948 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.47
COL11A1P12107 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.47
COL11A1P12107 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.47
COL11A1P12107 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
COL11A1P12107 SNORA77-201ENST00000408716 125 ntBASIC5.9□□□□□ -1.47
COL11A1P12107 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.9□□□□□ -1.47
COL11A1P12107 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC5.9□□□□□ -1.47
COL11A1P12107 RPL7AP61-201ENST00000443410 636 ntBASIC5.9□□□□□ -1.47
COL11A1P12107 AC092905.1-201ENST00000467527 949 ntBASIC5.9□□□□□ -1.47
COL11A1P12107 AC096741.1-201ENST00000472250 846 ntBASIC5.9□□□□□ -1.47
COL11A1P12107 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.9□□□□□ -1.47
COL11A1P12107 OR8Q1P-201ENST00000526467 655 ntBASIC5.9□□□□□ -1.47
COL11A1P12107 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC5.9□□□□□ -1.47
COL11A1P12107 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC5.9□□□□□ -1.47
COL11A1P12107 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.9□□□□□ -1.47
COL11A1P12107 BNIP3P35-201ENST00000604530 490 ntBASIC5.9□□□□□ -1.47
COL11A1P12107 AL022394.1-201ENST00000606979 292 ntBASIC5.9□□□□□ -1.47
COL11A1P12107 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC5.9□□□□□ -1.47
COL11A1P12107 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC5.9□□□□□ -1.47
COL11A1P12107 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
COL11A1P12107 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
COL11A1P12107 NOSTRIN-202ENST00000397206 1446 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
COL11A1P12107 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.89□□□□□ -1.47
COL11A1P12107 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
COL11A1P12107 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
COL11A1P12107 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
COL11A1P12107 MIPEPP2-201ENST00000422560 1819 ntBASIC5.89□□□□□ -1.47
COL11A1P12107 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC5.89□□□□□ -1.47
COL11A1P12107 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
COL11A1P12107 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
COL11A1P12107 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC5.89□□□□□ -1.47
COL11A1P12107 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
COL11A1P12107 CHMP1B2P-201ENST00000399581 597 ntBASIC5.89□□□□□ -1.47
COL11A1P12107 AL078599.1-201ENST00000402075 293 ntBASIC5.89□□□□□ -1.47
COL11A1P12107 AC019050.1-201ENST00000418508 492 ntBASIC5.89□□□□□ -1.47
COL11A1P12107 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.89□□□□□ -1.47
COL11A1P12107 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.89□□□□□ -1.47
COL11A1P12107 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.89□□□□□ -1.47
COL11A1P12107 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC5.89□□□□□ -1.47
COL11A1P12107 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
COL11A1P12107 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC5.89□□□□□ -1.47
COL11A1P12107 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.89□□□□□ -1.47
COL11A1P12107 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.89□□□□□ -1.47
COL11A1P12107 AC209154.1-201ENST00000582156 337 ntBASIC5.89□□□□□ -1.47
COL11A1P12107 AC005084.1-201ENST00000605160 304 ntBASIC5.89□□□□□ -1.47
COL11A1P12107 AC005618.4-201ENST00000625053 554 ntBASIC5.89□□□□□ -1.47
COL11A1P12107 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC5.89□□□□□ -1.47
COL11A1P12107 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
COL11A1P12107 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
COL11A1P12107 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
COL11A1P12107 SLC6A14-202ENST00000598581 4520 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
COL11A1P12107 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
COL11A1P12107 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
COL11A1P12107 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.88□□□□□ -1.47
COL11A1P12107 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
COL11A1P12107 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
COL11A1P12107 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.88□□□□□ -1.47
COL11A1P12107 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
COL11A1P12107 AC091390.1-201ENST00000433904 331 ntBASIC5.88□□□□□ -1.47
COL11A1P12107 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.88□□□□□ -1.47
COL11A1P12107 AC006466.1-201ENST00000438721 289 ntBASIC5.88□□□□□ -1.47
COL11A1P12107 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.88□□□□□ -1.47
COL11A1P12107 TPT1P12-201ENST00000448968 492 ntBASIC5.88□□□□□ -1.47
COL11A1P12107 RN7SL346P-201ENST00000491561 294 ntBASIC5.88□□□□□ -1.47
COL11A1P12107 AC010350.1-201ENST00000504908 231 ntBASIC5.88□□□□□ -1.47
COL11A1P12107 AC012400.1-201ENST00000518452 381 ntBASIC5.88□□□□□ -1.47
COL11A1P12107 AC079075.1-201ENST00000559543 878 ntBASIC5.88□□□□□ -1.47
COL11A1P12107 AC105129.1-201ENST00000560250 297 ntBASIC5.88□□□□□ -1.47
COL11A1P12107 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.88□□□□□ -1.47
COL11A1P12107 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC5.88□□□□□ -1.47
COL11A1P12107 AC078842.2-201ENST00000447529 1835 ntTSL 2 BASIC5.88□□□□□ -1.47
COL11A1P12107 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
COL11A1P12107 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
COL11A1P12107 AL355834.1-201ENST00000556602 3965 ntBASIC5.88□□□□□ -1.47
COL11A1P12107 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
COL11A1P12107 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
COL11A1P12107 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
COL11A1P12107 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
COL11A1P12107 AC079298.1-201ENST00000625026 1619 ntBASIC5.88□□□□□ -1.47
COL11A1P12107 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
COL11A1P12107 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
COL11A1P12107 RPL34P27-201ENST00000428810 349 ntBASIC5.88□□□□□ -1.47
COL11A1P12107 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 142.5 ms