Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
CSB-PGBD3P0DP91 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC8.57□□□□□ -1.04
CSB-PGBD3P0DP91 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC8.57□□□□□ -1.04
CSB-PGBD3P0DP91 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
CSB-PGBD3P0DP91 MIR199B-201ENST00000384849 110 ntBASIC8.57□□□□□ -1.04
CSB-PGBD3P0DP91 AC016769.2-201ENST00000414815 475 ntBASIC8.57□□□□□ -1.04
CSB-PGBD3P0DP91 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC8.57□□□□□ -1.04
CSB-PGBD3P0DP91 AL157884.1-201ENST00000424561 454 ntBASIC8.57□□□□□ -1.04
CSB-PGBD3P0DP91 RPL12P12-201ENST00000424633 501 ntBASIC8.57□□□□□ -1.04
CSB-PGBD3P0DP91 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC8.57□□□□□ -1.04
CSB-PGBD3P0DP91 NANOGP2-201ENST00000435391 727 ntBASIC8.57□□□□□ -1.04
CSB-PGBD3P0DP91 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC8.57□□□□□ -1.04
CSB-PGBD3P0DP91 CUBNP2-201ENST00000443534 1139 ntBASIC8.57□□□□□ -1.04
CSB-PGBD3P0DP91 AC068135.1-201ENST00000446164 246 ntBASIC8.57□□□□□ -1.04
CSB-PGBD3P0DP91 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC8.57□□□□□ -1.04
CSB-PGBD3P0DP91 AL133351.3-201ENST00000454998 193 ntBASIC8.57□□□□□ -1.04
CSB-PGBD3P0DP91 RN7SL369P-201ENST00000477138 299 ntBASIC8.57□□□□□ -1.04
CSB-PGBD3P0DP91 PPIAP19-201ENST00000486414 492 ntBASIC8.57□□□□□ -1.04
CSB-PGBD3P0DP91 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC8.57□□□□□ -1.04
CSB-PGBD3P0DP91 RNA5SP340-201ENST00000517132 107 ntBASIC8.57□□□□□ -1.04
CSB-PGBD3P0DP91 MTCYBP19-201ENST00000517463 1124 ntBASIC8.57□□□□□ -1.04
CSB-PGBD3P0DP91 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
CSB-PGBD3P0DP91 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC8.57□□□□□ -1.04
CSB-PGBD3P0DP91 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC8.57□□□□□ -1.04
CSB-PGBD3P0DP91 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC8.57□□□□□ -1.04
CSB-PGBD3P0DP91 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC8.57□□□□□ -1.04
CSB-PGBD3P0DP91 AL354943.1-201ENST00000572103 781 ntBASIC8.57□□□□□ -1.04
CSB-PGBD3P0DP91 MTND4LP24-201ENST00000572277 291 ntBASIC8.57□□□□□ -1.04
CSB-PGBD3P0DP91 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC8.57□□□□□ -1.04
CSB-PGBD3P0DP91 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
CSB-PGBD3P0DP91 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC8.57□□□□□ -1.04
CSB-PGBD3P0DP91 AC008759.1-201ENST00000589783 983 ntBASIC8.57□□□□□ -1.04
CSB-PGBD3P0DP91 RSL24D1P11-201ENST00000591045 491 ntBASIC8.57□□□□□ -1.04
CSB-PGBD3P0DP91 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
CSB-PGBD3P0DP91 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC8.57□□□□□ -1.04
CSB-PGBD3P0DP91 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC8.57□□□□□ -1.04
CSB-PGBD3P0DP91 BUB1P1-201ENST00000603541 607 ntBASIC8.57□□□□□ -1.04
CSB-PGBD3P0DP91 AC109309.2-201ENST00000612597 332 ntBASIC8.57□□□□□ -1.04
CSB-PGBD3P0DP91 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC8.57□□□□□ -1.04
CSB-PGBD3P0DP91 EBF1-203ENST00000517373 2277 ntTSL 5 BASIC8.57□□□□□ -1.04
CSB-PGBD3P0DP91 EEF1A1P9-201ENST00000514975 1383 ntBASIC8.57□□□□□ -1.04
CSB-PGBD3P0DP91 SAGE3P-201ENST00000619800 1635 ntBASIC8.57□□□□□ -1.04
CSB-PGBD3P0DP91 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
CSB-PGBD3P0DP91 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC8.57□□□□□ -1.04
CSB-PGBD3P0DP91 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC8.57□□□□□ -1.04
CSB-PGBD3P0DP91 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
CSB-PGBD3P0DP91 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC8.56□□□□□ -1.04
CSB-PGBD3P0DP91 AC010168.2-201ENST00000562691 5428 ntBASIC8.56□□□□□ -1.04
CSB-PGBD3P0DP91 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC8.56□□□□□ -1.04
CSB-PGBD3P0DP91 SPARCL1-205ENST00000503414 2520 ntTSL 2 BASIC8.56□□□□□ -1.04
CSB-PGBD3P0DP91 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC8.56□□□□□ -1.04
CSB-PGBD3P0DP91 CACNB4-270ENST00000638040 2026 ntTSL 5 BASIC8.56□□□□□ -1.04
CSB-PGBD3P0DP91 TRIM5-202ENST00000380034 2991 ntAPPRIS P1 TSL 2 BASIC8.56□□□□□ -1.04
CSB-PGBD3P0DP91 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
CSB-PGBD3P0DP91 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
CSB-PGBD3P0DP91 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC8.56□□□□□ -1.04
CSB-PGBD3P0DP91 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC8.56□□□□□ -1.04
CSB-PGBD3P0DP91 SUGT1P2-201ENST00000379452 992 ntBASIC8.56□□□□□ -1.04
CSB-PGBD3P0DP91 ATP5HP3-201ENST00000396994 486 ntBASIC8.56□□□□□ -1.04
CSB-PGBD3P0DP91 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC8.56□□□□□ -1.04
CSB-PGBD3P0DP91 BTF3P8-201ENST00000414577 526 ntBASIC8.56□□□□□ -1.04
CSB-PGBD3P0DP91 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC8.56□□□□□ -1.04
CSB-PGBD3P0DP91 GTF2IP2-201ENST00000424290 697 ntBASIC8.56□□□□□ -1.04
CSB-PGBD3P0DP91 Z68868.1-201ENST00000429048 544 ntBASIC8.56□□□□□ -1.04
CSB-PGBD3P0DP91 RBMX2P4-201ENST00000441256 376 ntBASIC8.56□□□□□ -1.04
CSB-PGBD3P0DP91 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC8.56□□□□□ -1.04
CSB-PGBD3P0DP91 DEFA11P-201ENST00000446470 261 ntBASIC8.56□□□□□ -1.04
CSB-PGBD3P0DP91 RPL31P15-201ENST00000449770 338 ntBASIC8.56□□□□□ -1.04
CSB-PGBD3P0DP91 RN7SL643P-201ENST00000471845 291 ntBASIC8.56□□□□□ -1.04
CSB-PGBD3P0DP91 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
CSB-PGBD3P0DP91 RPL7P40-201ENST00000481703 745 ntBASIC8.56□□□□□ -1.04
CSB-PGBD3P0DP91 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC8.56□□□□□ -1.04
CSB-PGBD3P0DP91 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC8.56□□□□□ -1.04
CSB-PGBD3P0DP91 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC8.56□□□□□ -1.04
CSB-PGBD3P0DP91 RN7SKP34-201ENST00000516142 244 ntBASIC8.56□□□□□ -1.04
CSB-PGBD3P0DP91 RNU2-30P-201ENST00000516209 141 ntBASIC8.56□□□□□ -1.04
CSB-PGBD3P0DP91 RNU6-759P-201ENST00000516740 103 ntBASIC8.56□□□□□ -1.04
CSB-PGBD3P0DP91 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC8.56□□□□□ -1.04
CSB-PGBD3P0DP91 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC8.56□□□□□ -1.04
CSB-PGBD3P0DP91 OR5AM1P-201ENST00000532136 1032 ntBASIC8.56□□□□□ -1.04
CSB-PGBD3P0DP91 AP000619.2-201ENST00000546014 969 ntBASIC8.56□□□□□ -1.04
CSB-PGBD3P0DP91 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC8.56□□□□□ -1.04
CSB-PGBD3P0DP91 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC8.56□□□□□ -1.04
CSB-PGBD3P0DP91 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
CSB-PGBD3P0DP91 SNORA59B-202ENST00000578183 701 ntBASIC8.56□□□□□ -1.04
CSB-PGBD3P0DP91 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC8.56□□□□□ -1.04
CSB-PGBD3P0DP91 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC8.56□□□□□ -1.04
CSB-PGBD3P0DP91 TEX41-218ENST00000596540 882 ntTSL 5 BASIC8.56□□□□□ -1.04
CSB-PGBD3P0DP91 AC027243.2-201ENST00000602530 724 ntBASIC8.56□□□□□ -1.04
CSB-PGBD3P0DP91 AL020997.3-201ENST00000602843 359 ntBASIC8.56□□□□□ -1.04
CSB-PGBD3P0DP91 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC8.56□□□□□ -1.04
CSB-PGBD3P0DP91 E2F8-201ENST00000250024 3240 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
CSB-PGBD3P0DP91 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC8.56□□□□□ -1.04
CSB-PGBD3P0DP91 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC8.56□□□□□ -1.04
CSB-PGBD3P0DP91 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC8.56□□□□□ -1.04
CSB-PGBD3P0DP91 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
CSB-PGBD3P0DP91 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
CSB-PGBD3P0DP91 FLJ42393-201ENST00000623801 2270 ntBASIC8.56□□□□□ -1.04
CSB-PGBD3P0DP91 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
CSB-PGBD3P0DP91 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms