Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 IGLVIV-65-201ENST00000517313 360 ntBASIC2.25□□□□□ -2.05
USH2AO75445 AL049779.3-201ENST00000557141 606 ntBASIC2.25□□□□□ -2.05
USH2AO75445 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC2.25□□□□□ -2.05
USH2AO75445 AC008782.1-201ENST00000603386 430 ntBASIC2.25□□□□□ -2.05
USH2AO75445 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
USH2AO75445 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
USH2AO75445 AC004817.4-201ENST00000602396 3625 ntBASIC2.25□□□□□ -2.05
USH2AO75445 AL592148.3-201ENST00000608771 2646 ntBASIC2.25□□□□□ -2.05
USH2AO75445 AL353763.1-201ENST00000624467 1628 ntBASIC2.25□□□□□ -2.05
USH2AO75445 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
USH2AO75445 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC2.25□□□□□ -2.05
USH2AO75445 ILDR2-201ENST00000271417 13140 ntAPPRIS P2 TSL 1 (best) BASIC2.25□□□□□ -2.05
USH2AO75445 ADAMTS9-210ENST00000498707 7624 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
USH2AO75445 ITGA11-202ENST00000423218 10192 ntAPPRIS ALT1 TSL 2 BASIC2.25□□□□□ -2.05
USH2AO75445 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC2.25□□□□□ -2.05
USH2AO75445 KPNB1-201ENST00000290158 6139 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
USH2AO75445 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
USH2AO75445 TNC-210ENST00000535648 7508 ntTSL 5 BASIC2.25□□□□□ -2.05
USH2AO75445 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
USH2AO75445 VPS8-207ENST00000436792 5011 ntAPPRIS ALT1 TSL 2 BASIC2.25□□□□□ -2.05
USH2AO75445 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
USH2AO75445 AC006978.2-201ENST00000442800 666 ntAPPRIS P1 TSL 3 BASIC2.25□□□□□ -2.05
USH2AO75445 GAS5-223ENST00000452197 483 ntTSL 3 BASIC2.25□□□□□ -2.05
USH2AO75445 AC079168.1-201ENST00000458741 345 ntBASIC2.25□□□□□ -2.05
USH2AO75445 AK3P4-201ENST00000504283 583 ntBASIC2.25□□□□□ -2.05
USH2AO75445 AC010350.1-201ENST00000504908 231 ntBASIC2.25□□□□□ -2.05
USH2AO75445 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC2.25□□□□□ -2.05
USH2AO75445 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC2.25□□□□□ -2.05
USH2AO75445 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC2.25□□□□□ -2.05
USH2AO75445 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC2.25□□□□□ -2.05
USH2AO75445 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC2.25□□□□□ -2.05
USH2AO75445 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC2.25□□□□□ -2.05
USH2AO75445 AC114876.1-201ENST00000490962 1366 ntBASIC2.25□□□□□ -2.05
USH2AO75445 SHPRH-211ENST00000629427 7338 ntAPPRIS ALT1 TSL 5 BASIC2.25□□□□□ -2.05
USH2AO75445 HEPH-209ENST00000519389 6013 ntAPPRIS P3 TSL 1 (best) BASIC2.25□□□□□ -2.05
USH2AO75445 MXRA5Y-201ENST00000420610 8000 ntBASIC2.25□□□□□ -2.05
USH2AO75445 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
USH2AO75445 MIR659-201ENST00000384963 97 ntBASIC2.25□□□□□ -2.05
USH2AO75445 PTMAP2-201ENST00000397627 327 ntBASIC2.25□□□□□ -2.05
USH2AO75445 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
USH2AO75445 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC2.25□□□□□ -2.05
USH2AO75445 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
USH2AO75445 RPL23AP24-201ENST00000458203 385 ntBASIC2.25□□□□□ -2.05
USH2AO75445 RN7SL443P-201ENST00000464331 290 ntBASIC2.25□□□□□ -2.05
USH2AO75445 AC091959.2-201ENST00000477363 321 ntBASIC2.25□□□□□ -2.05
USH2AO75445 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC2.25□□□□□ -2.05
USH2AO75445 CYP4F27P-201ENST00000514557 494 ntBASIC2.25□□□□□ -2.05
USH2AO75445 RN7SKP13-201ENST00000515933 244 ntBASIC2.25□□□□□ -2.05
USH2AO75445 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC2.25□□□□□ -2.05
USH2AO75445 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC2.25□□□□□ -2.05
USH2AO75445 MIMT1-201ENST00000597105 1050 ntBASIC2.25□□□□□ -2.05
USH2AO75445 AC096577.2-201ENST00000611455 153 ntBASIC2.25□□□□□ -2.05
USH2AO75445 TCL6_3.1-201ENST00000619064 137 ntBASIC2.25□□□□□ -2.05
USH2AO75445 ZNF407-207ENST00000582337 5662 ntTSL 5 BASIC2.25□□□□□ -2.05
USH2AO75445 OR2F1-203ENST00000641412 4829 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
USH2AO75445 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC2.25□□□□□ -2.05
USH2AO75445 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
USH2AO75445 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC2.25□□□□□ -2.05
USH2AO75445 MYO10-201ENST00000274203 11456 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
USH2AO75445 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
USH2AO75445 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
USH2AO75445 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
USH2AO75445 ZNF407-203ENST00000577538 5794 ntAPPRIS ALT2 TSL 2 BASIC2.25□□□□□ -2.05
USH2AO75445 POGK-201ENST00000367875 6254 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
USH2AO75445 TNFRSF9-204ENST00000615230 5970 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
USH2AO75445 AC140479.2-201ENST00000421567 3130 ntBASIC2.25□□□□□ -2.05
USH2AO75445 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC2.25□□□□□ -2.05
USH2AO75445 TRPM3-204ENST00000360823 5966 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
USH2AO75445 CACNB4-239ENST00000636947 5575 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
USH2AO75445 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
USH2AO75445 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
USH2AO75445 C20orf194-201ENST00000252032 6869 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
USH2AO75445 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC2.25□□□□□ -2.05
USH2AO75445 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
USH2AO75445 AC013488.1-201ENST00000526618 1838 ntBASIC2.25□□□□□ -2.05
USH2AO75445 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC2.25□□□□□ -2.05
USH2AO75445 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
USH2AO75445 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.24□□□□□ -2.05
USH2AO75445 AC124944.2-201ENST00000429866 1242 ntBASIC2.24□□□□□ -2.05
USH2AO75445 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC2.24□□□□□ -2.05
USH2AO75445 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC2.24□□□□□ -2.05
USH2AO75445 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
USH2AO75445 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
USH2AO75445 YWHAZP2-201ENST00000440317 728 ntBASIC2.24□□□□□ -2.05
USH2AO75445 AL591363.1-201ENST00000450091 483 ntBASIC2.24□□□□□ -2.05
USH2AO75445 RN7SL303P-201ENST00000469773 251 ntBASIC2.24□□□□□ -2.05
USH2AO75445 RN7SKP288-201ENST00000516227 268 ntBASIC2.24□□□□□ -2.05
USH2AO75445 MIR2116-201ENST00000517221 80 ntBASIC2.24□□□□□ -2.05
USH2AO75445 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC2.24□□□□□ -2.05
USH2AO75445 BDH2P1-201ENST00000602288 736 ntBASIC2.24□□□□□ -2.05
USH2AO75445 AC098935.2-201ENST00000604222 466 ntBASIC2.24□□□□□ -2.05
USH2AO75445 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC2.24□□□□□ -2.05
USH2AO75445 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
USH2AO75445 EEF1A1P33-201ENST00000554413 1362 ntBASIC2.24□□□□□ -2.05
USH2AO75445 TP63-201ENST00000264731 4909 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
USH2AO75445 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC2.24□□□□□ -2.05
USH2AO75445 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC2.24□□□□□ -2.05
USH2AO75445 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
USH2AO75445 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
USH2AO75445 MARF1-202ENST00000540441 7105 ntTSL 5 BASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 138.5 ms