Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 AC004453.1-201ENST00000487895 408 ntBASIC5.36□□□□□ -1.55
TMX2-CTNND1H3BSU7 AC072052.1-201ENST00000496556 306 ntBASIC5.36□□□□□ -1.55
TMX2-CTNND1H3BSU7 PGAM1P13-201ENST00000507497 754 ntBASIC5.36□□□□□ -1.55
TMX2-CTNND1H3BSU7 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.36□□□□□ -1.55
TMX2-CTNND1H3BSU7 RNU6ATAC39P-201ENST00000516309 149 ntBASIC5.36□□□□□ -1.55
TMX2-CTNND1H3BSU7 AP006245.2-201ENST00000522004 300 ntBASIC5.36□□□□□ -1.55
TMX2-CTNND1H3BSU7 OR4A43P-201ENST00000532938 908 ntBASIC5.36□□□□□ -1.55
TMX2-CTNND1H3BSU7 AC078878.1-201ENST00000539832 958 ntBASIC5.36□□□□□ -1.55
TMX2-CTNND1H3BSU7 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.36□□□□□ -1.55
TMX2-CTNND1H3BSU7 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.36□□□□□ -1.55
TMX2-CTNND1H3BSU7 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.36□□□□□ -1.55
TMX2-CTNND1H3BSU7 MIR4700-201ENST00000578311 74 ntBASIC5.36□□□□□ -1.55
TMX2-CTNND1H3BSU7 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.36□□□□□ -1.55
TMX2-CTNND1H3BSU7 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.36□□□□□ -1.55
TMX2-CTNND1H3BSU7 AL133481.2-203ENST00000607558 139 ntBASIC5.36□□□□□ -1.55
TMX2-CTNND1H3BSU7 AL118522.2-201ENST00000616045 615 ntBASIC5.36□□□□□ -1.55
TMX2-CTNND1H3BSU7 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC5.36□□□□□ -1.55
TMX2-CTNND1H3BSU7 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.36□□□□□ -1.55
TMX2-CTNND1H3BSU7 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.36□□□□□ -1.55
TMX2-CTNND1H3BSU7 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
TMX2-CTNND1H3BSU7 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
TMX2-CTNND1H3BSU7 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TMX2-CTNND1H3BSU7 ADAM5-202ENST00000399789 1942 ntBASIC5.36□□□□□ -1.55
TMX2-CTNND1H3BSU7 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.36□□□□□ -1.55
TMX2-CTNND1H3BSU7 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TMX2-CTNND1H3BSU7 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.36□□□□□ -1.55
TMX2-CTNND1H3BSU7 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TMX2-CTNND1H3BSU7 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TMX2-CTNND1H3BSU7 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TMX2-CTNND1H3BSU7 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TMX2-CTNND1H3BSU7 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
TMX2-CTNND1H3BSU7 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.36□□□□□ -1.55
TMX2-CTNND1H3BSU7 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TMX2-CTNND1H3BSU7 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.35□□□□□ -1.55
TMX2-CTNND1H3BSU7 AC239868.2-201ENST00000564237 4527 ntBASIC5.35□□□□□ -1.55
TMX2-CTNND1H3BSU7 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TMX2-CTNND1H3BSU7 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TMX2-CTNND1H3BSU7 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TMX2-CTNND1H3BSU7 AP005432.1-201ENST00000580891 3485 ntBASIC5.35□□□□□ -1.55
TMX2-CTNND1H3BSU7 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
TMX2-CTNND1H3BSU7 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.35□□□□□ -1.55
TMX2-CTNND1H3BSU7 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.35□□□□□ -1.55
TMX2-CTNND1H3BSU7 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
TMX2-CTNND1H3BSU7 AC006484.1-201ENST00000435086 1884 ntBASIC5.35□□□□□ -1.55
TMX2-CTNND1H3BSU7 AL158152.1-201ENST00000602652 1435 ntBASIC5.35□□□□□ -1.55
TMX2-CTNND1H3BSU7 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.35□□□□□ -1.55
TMX2-CTNND1H3BSU7 TCP11X1-202ENST00000622971 1372 ntBASIC5.35□□□□□ -1.55
TMX2-CTNND1H3BSU7 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5.35□□□□□ -1.55
TMX2-CTNND1H3BSU7 MIR130A-201ENST00000385274 89 ntBASIC5.35□□□□□ -1.55
TMX2-CTNND1H3BSU7 AC005042.1-201ENST00000393397 800 ntBASIC5.35□□□□□ -1.55
TMX2-CTNND1H3BSU7 RN7SKP125-201ENST00000410481 302 ntBASIC5.35□□□□□ -1.55
TMX2-CTNND1H3BSU7 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.35□□□□□ -1.55
TMX2-CTNND1H3BSU7 OR6D1P-201ENST00000436165 939 ntBASIC5.35□□□□□ -1.55
TMX2-CTNND1H3BSU7 SERPINA7P1-201ENST00000443077 631 ntBASIC5.35□□□□□ -1.55
TMX2-CTNND1H3BSU7 AC092106.1-201ENST00000444291 373 ntBASIC5.35□□□□□ -1.55
TMX2-CTNND1H3BSU7 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TMX2-CTNND1H3BSU7 RPSAP50-201ENST00000481955 852 ntBASIC5.35□□□□□ -1.55
TMX2-CTNND1H3BSU7 RPS4XP1-201ENST00000482189 787 ntBASIC5.35□□□□□ -1.55
TMX2-CTNND1H3BSU7 RN7SL97P-201ENST00000486780 299 ntBASIC5.35□□□□□ -1.55
TMX2-CTNND1H3BSU7 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.35□□□□□ -1.55
TMX2-CTNND1H3BSU7 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.35□□□□□ -1.55
TMX2-CTNND1H3BSU7 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
TMX2-CTNND1H3BSU7 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.35□□□□□ -1.55
TMX2-CTNND1H3BSU7 AC016839.1-201ENST00000578162 867 ntBASIC5.35□□□□□ -1.55
TMX2-CTNND1H3BSU7 AC060766.1-201ENST00000590824 627 ntBASIC5.35□□□□□ -1.55
TMX2-CTNND1H3BSU7 AL136295.6-201ENST00000610486 658 ntBASIC5.35□□□□□ -1.55
TMX2-CTNND1H3BSU7 AC009163.6-201ENST00000612367 342 ntBASIC5.35□□□□□ -1.55
TMX2-CTNND1H3BSU7 AC244517.3-201ENST00000616254 1235 ntBASIC5.35□□□□□ -1.55
TMX2-CTNND1H3BSU7 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.35□□□□□ -1.55
TMX2-CTNND1H3BSU7 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.35□□□□□ -1.55
TMX2-CTNND1H3BSU7 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.35□□□□□ -1.55
TMX2-CTNND1H3BSU7 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TMX2-CTNND1H3BSU7 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
TMX2-CTNND1H3BSU7 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.35□□□□□ -1.55
TMX2-CTNND1H3BSU7 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.35□□□□□ -1.55
TMX2-CTNND1H3BSU7 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.35□□□□□ -1.55
TMX2-CTNND1H3BSU7 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.35□□□□□ -1.55
TMX2-CTNND1H3BSU7 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.34□□□□□ -1.55
TMX2-CTNND1H3BSU7 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
TMX2-CTNND1H3BSU7 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
TMX2-CTNND1H3BSU7 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.34□□□□□ -1.55
TMX2-CTNND1H3BSU7 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
TMX2-CTNND1H3BSU7 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.34□□□□□ -1.55
TMX2-CTNND1H3BSU7 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.34□□□□□ -1.55
TMX2-CTNND1H3BSU7 RNA5SP443-201ENST00000363083 132 ntBASIC5.34□□□□□ -1.55
TMX2-CTNND1H3BSU7 MIR765-201ENST00000390226 114 ntBASIC5.34□□□□□ -1.55
TMX2-CTNND1H3BSU7 RNU1-77P-201ENST00000390868 162 ntBASIC5.34□□□□□ -1.55
TMX2-CTNND1H3BSU7 AL009179.1-201ENST00000406085 265 ntBASIC5.34□□□□□ -1.55
TMX2-CTNND1H3BSU7 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.34□□□□□ -1.55
TMX2-CTNND1H3BSU7 AL390774.1-201ENST00000411924 246 ntBASIC5.34□□□□□ -1.55
TMX2-CTNND1H3BSU7 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.34□□□□□ -1.55
TMX2-CTNND1H3BSU7 AC009784.1-201ENST00000426484 460 ntBASIC5.34□□□□□ -1.55
TMX2-CTNND1H3BSU7 CRIP1P1-201ENST00000427567 185 ntBASIC5.34□□□□□ -1.55
TMX2-CTNND1H3BSU7 OR52B5P-201ENST00000435337 951 ntBASIC5.34□□□□□ -1.55
TMX2-CTNND1H3BSU7 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.34□□□□□ -1.55
TMX2-CTNND1H3BSU7 AC004129.2-201ENST00000457229 287 ntBASIC5.34□□□□□ -1.55
TMX2-CTNND1H3BSU7 UBA52P7-201ENST00000486088 380 ntBASIC5.34□□□□□ -1.55
TMX2-CTNND1H3BSU7 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC5.34□□□□□ -1.55
TMX2-CTNND1H3BSU7 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TMX2-CTNND1H3BSU7 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms