Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 RPL7P56-201ENST00000429441 717 ntBASIC5.7□□□□□ -1.5
YIPF1Q9Y548 RPS27P18-201ENST00000431701 247 ntBASIC5.7□□□□□ -1.5
YIPF1Q9Y548 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC5.7□□□□□ -1.5
YIPF1Q9Y548 RPS11P7-201ENST00000442125 465 ntBASIC5.7□□□□□ -1.5
YIPF1Q9Y548 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC5.7□□□□□ -1.5
YIPF1Q9Y548 GAPDHP25-201ENST00000447061 1001 ntBASIC5.7□□□□□ -1.5
YIPF1Q9Y548 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
YIPF1Q9Y548 AL451063.1-201ENST00000450164 1133 ntBASIC5.7□□□□□ -1.5
YIPF1Q9Y548 OTX2P1-201ENST00000450956 354 ntBASIC5.7□□□□□ -1.5
YIPF1Q9Y548 AL389915.2-201ENST00000454576 441 ntBASIC5.7□□□□□ -1.5
YIPF1Q9Y548 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
YIPF1Q9Y548 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
YIPF1Q9Y548 OR2A3P-201ENST00000493774 953 ntBASIC5.7□□□□□ -1.5
YIPF1Q9Y548 AC109464.1-201ENST00000511091 819 ntBASIC5.7□□□□□ -1.5
YIPF1Q9Y548 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.7□□□□□ -1.5
YIPF1Q9Y548 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.7□□□□□ -1.5
YIPF1Q9Y548 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.7□□□□□ -1.5
YIPF1Q9Y548 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
YIPF1Q9Y548 AC009268.1-201ENST00000561352 1203 ntBASIC5.7□□□□□ -1.5
YIPF1Q9Y548 AC005341.1-201ENST00000571086 708 ntBASIC5.7□□□□□ -1.5
YIPF1Q9Y548 AC022387.2-201ENST00000604050 448 ntBASIC5.7□□□□□ -1.5
YIPF1Q9Y548 TAS2R6P-201ENST00000605022 826 ntBASIC5.7□□□□□ -1.5
YIPF1Q9Y548 KATNBL1P1-201ENST00000605192 748 ntBASIC5.7□□□□□ -1.5
YIPF1Q9Y548 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC5.7□□□□□ -1.5
YIPF1Q9Y548 AC090527.3-201ENST00000619041 548 ntBASIC5.7□□□□□ -1.5
YIPF1Q9Y548 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
YIPF1Q9Y548 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
YIPF1Q9Y548 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
YIPF1Q9Y548 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.7□□□□□ -1.5
YIPF1Q9Y548 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
YIPF1Q9Y548 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
YIPF1Q9Y548 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
YIPF1Q9Y548 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
YIPF1Q9Y548 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
YIPF1Q9Y548 AC022417.1-201ENST00000624768 1303 ntBASIC5.7□□□□□ -1.5
YIPF1Q9Y548 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
YIPF1Q9Y548 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
YIPF1Q9Y548 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.69□□□□□ -1.5
YIPF1Q9Y548 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
YIPF1Q9Y548 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
YIPF1Q9Y548 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
YIPF1Q9Y548 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
YIPF1Q9Y548 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.69□□□□□ -1.5
YIPF1Q9Y548 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.69□□□□□ -1.5
YIPF1Q9Y548 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
YIPF1Q9Y548 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
YIPF1Q9Y548 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
YIPF1Q9Y548 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
YIPF1Q9Y548 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
YIPF1Q9Y548 AL589994.1-201ENST00000404962 340 ntBASIC5.69□□□□□ -1.5
YIPF1Q9Y548 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.69□□□□□ -1.5
YIPF1Q9Y548 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC5.69□□□□□ -1.5
YIPF1Q9Y548 RPL23AP18-201ENST00000416139 468 ntBASIC5.69□□□□□ -1.5
YIPF1Q9Y548 AC093655.2-201ENST00000425735 631 ntBASIC5.69□□□□□ -1.5
YIPF1Q9Y548 Z85994.2-201ENST00000434327 452 ntBASIC5.69□□□□□ -1.5
YIPF1Q9Y548 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.69□□□□□ -1.5
YIPF1Q9Y548 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.69□□□□□ -1.5
YIPF1Q9Y548 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC5.69□□□□□ -1.5
YIPF1Q9Y548 IGBP1P3-201ENST00000447449 1000 ntBASIC5.69□□□□□ -1.5
YIPF1Q9Y548 OR52Y1P-201ENST00000452418 828 ntBASIC5.69□□□□□ -1.5
YIPF1Q9Y548 AZGP1P2-201ENST00000454506 345 ntBASIC5.69□□□□□ -1.5
YIPF1Q9Y548 AL356390.1-201ENST00000455684 397 ntBASIC5.69□□□□□ -1.5
YIPF1Q9Y548 SNORD125-201ENST00000459538 96 ntBASIC5.69□□□□□ -1.5
YIPF1Q9Y548 BX284632.1-201ENST00000478218 541 ntBASIC5.69□□□□□ -1.5
YIPF1Q9Y548 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC5.69□□□□□ -1.5
YIPF1Q9Y548 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.69□□□□□ -1.5
YIPF1Q9Y548 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.69□□□□□ -1.5
YIPF1Q9Y548 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC5.69□□□□□ -1.5
YIPF1Q9Y548 AP006245.2-201ENST00000522004 300 ntBASIC5.69□□□□□ -1.5
YIPF1Q9Y548 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.69□□□□□ -1.5
YIPF1Q9Y548 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.69□□□□□ -1.5
YIPF1Q9Y548 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.69□□□□□ -1.5
YIPF1Q9Y548 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
YIPF1Q9Y548 AC127381.1-201ENST00000555979 939 ntBASIC5.69□□□□□ -1.5
YIPF1Q9Y548 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.69□□□□□ -1.5
YIPF1Q9Y548 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.69□□□□□ -1.5
YIPF1Q9Y548 AP000769.2-201ENST00000602344 396 ntBASIC5.69□□□□□ -1.5
YIPF1Q9Y548 AC096586.2-201ENST00000610260 441 ntBASIC5.69□□□□□ -1.5
YIPF1Q9Y548 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
YIPF1Q9Y548 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
YIPF1Q9Y548 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
YIPF1Q9Y548 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
YIPF1Q9Y548 THAP12P8-201ENST00000447914 2115 ntBASIC5.69□□□□□ -1.5
YIPF1Q9Y548 AL359955.1-201ENST00000455242 3275 ntBASIC5.69□□□□□ -1.5
YIPF1Q9Y548 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
YIPF1Q9Y548 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
YIPF1Q9Y548 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
YIPF1Q9Y548 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
YIPF1Q9Y548 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC5.69□□□□□ -1.5
YIPF1Q9Y548 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.69□□□□□ -1.5
YIPF1Q9Y548 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
YIPF1Q9Y548 AL353796.1-201ENST00000561542 3241 ntBASIC5.69□□□□□ -1.5
YIPF1Q9Y548 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
YIPF1Q9Y548 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
YIPF1Q9Y548 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
YIPF1Q9Y548 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.68□□□□□ -1.5
YIPF1Q9Y548 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
YIPF1Q9Y548 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
YIPF1Q9Y548 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
YIPF1Q9Y548 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms