Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 MIR6780A-201ENST00000615089 68 ntBASIC10.26□□□□□ -0.77
SHROOM4Q9ULL8 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC10.26□□□□□ -0.77
SHROOM4Q9ULL8 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC10.26□□□□□ -0.77
SHROOM4Q9ULL8 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC10.26□□□□□ -0.77
SHROOM4Q9ULL8 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC10.26□□□□□ -0.77
SHROOM4Q9ULL8 MAPK10-270ENST00000641102 3538 ntBASIC10.26□□□□□ -0.77
SHROOM4Q9ULL8 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
SHROOM4Q9ULL8 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC10.25□□□□□ -0.77
SHROOM4Q9ULL8 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC10.25□□□□□ -0.77
SHROOM4Q9ULL8 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SHROOM4Q9ULL8 AC005225.5-201ENST00000623547 2225 ntBASIC10.25□□□□□ -0.77
SHROOM4Q9ULL8 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
SHROOM4Q9ULL8 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
SHROOM4Q9ULL8 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SHROOM4Q9ULL8 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
SHROOM4Q9ULL8 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
SHROOM4Q9ULL8 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC10.25□□□□□ -0.77
SHROOM4Q9ULL8 RNA5SP123-201ENST00000363244 119 ntBASIC10.25□□□□□ -0.77
SHROOM4Q9ULL8 RNU1-136P-201ENST00000384181 164 ntBASIC10.25□□□□□ -0.77
SHROOM4Q9ULL8 AL691447.1-201ENST00000419456 387 ntBASIC10.25□□□□□ -0.77
SHROOM4Q9ULL8 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC10.25□□□□□ -0.77
SHROOM4Q9ULL8 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC10.25□□□□□ -0.77
SHROOM4Q9ULL8 RPL7P16-201ENST00000479738 738 ntBASIC10.25□□□□□ -0.77
SHROOM4Q9ULL8 RPS17P5-201ENST00000498293 408 ntBASIC10.25□□□□□ -0.77
SHROOM4Q9ULL8 IGBP1P5-201ENST00000507524 1000 ntBASIC10.25□□□□□ -0.77
SHROOM4Q9ULL8 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC10.25□□□□□ -0.77
SHROOM4Q9ULL8 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC10.25□□□□□ -0.77
SHROOM4Q9ULL8 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC10.25□□□□□ -0.77
SHROOM4Q9ULL8 NANOGP3-201ENST00000605855 286 ntBASIC10.25□□□□□ -0.77
SHROOM4Q9ULL8 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC10.25□□□□□ -0.77
SHROOM4Q9ULL8 AC068831.8-201ENST00000620171 435 ntBASIC10.25□□□□□ -0.77
SHROOM4Q9ULL8 AC016717.3-201ENST00000624730 554 ntBASIC10.25□□□□□ -0.77
SHROOM4Q9ULL8 EEF1A1P33-201ENST00000554413 1362 ntBASIC10.25□□□□□ -0.77
SHROOM4Q9ULL8 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC10.25□□□□□ -0.77
SHROOM4Q9ULL8 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC10.25□□□□□ -0.77
SHROOM4Q9ULL8 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC10.25□□□□□ -0.77
SHROOM4Q9ULL8 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC10.25□□□□□ -0.77
SHROOM4Q9ULL8 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
SHROOM4Q9ULL8 AC063976.2-201ENST00000425667 3556 ntBASIC10.25□□□□□ -0.77
SHROOM4Q9ULL8 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC10.24□□□□□ -0.77
SHROOM4Q9ULL8 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
SHROOM4Q9ULL8 RNU1-59P-201ENST00000364829 162 ntBASIC10.24□□□□□ -0.77
SHROOM4Q9ULL8 CCL7-202ENST00000394627 696 ntTSL 3 BASIC10.24□□□□□ -0.77
SHROOM4Q9ULL8 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC10.24□□□□□ -0.77
SHROOM4Q9ULL8 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC10.24□□□□□ -0.77
SHROOM4Q9ULL8 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC10.24□□□□□ -0.77
SHROOM4Q9ULL8 MTCYBP21-201ENST00000443300 1113 ntBASIC10.24□□□□□ -0.77
SHROOM4Q9ULL8 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC10.24□□□□□ -0.77
SHROOM4Q9ULL8 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
SHROOM4Q9ULL8 MTND6P2-201ENST00000512226 524 ntBASIC10.24□□□□□ -0.77
SHROOM4Q9ULL8 AP002373.2-201ENST00000541631 1060 ntBASIC10.24□□□□□ -0.77
SHROOM4Q9ULL8 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
SHROOM4Q9ULL8 U1.25-201ENST00000614085 162 ntBASIC10.24□□□□□ -0.77
SHROOM4Q9ULL8 U1.34-201ENST00000618578 162 ntBASIC10.24□□□□□ -0.77
SHROOM4Q9ULL8 U1.31-201ENST00000620022 160 ntBASIC10.24□□□□□ -0.77
SHROOM4Q9ULL8 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC10.24□□□□□ -0.77
SHROOM4Q9ULL8 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SHROOM4Q9ULL8 ALB-219ENST00000621085 1418 ntTSL 5 BASIC10.24□□□□□ -0.77
SHROOM4Q9ULL8 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
SHROOM4Q9ULL8 HSPD1P7-201ENST00000447985 1686 ntBASIC10.24□□□□□ -0.77
SHROOM4Q9ULL8 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SHROOM4Q9ULL8 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC10.24□□□□□ -0.77
SHROOM4Q9ULL8 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC10.24□□□□□ -0.77
SHROOM4Q9ULL8 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
SHROOM4Q9ULL8 RN7SKP95-201ENST00000362860 303 ntBASIC10.23□□□□□ -0.77
SHROOM4Q9ULL8 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
SHROOM4Q9ULL8 AC211486.3-201ENST00000412694 621 ntBASIC10.23□□□□□ -0.77
SHROOM4Q9ULL8 AC020898.1-201ENST00000474167 787 ntBASIC10.23□□□□□ -0.77
SHROOM4Q9ULL8 OR5AM1P-201ENST00000532136 1032 ntBASIC10.23□□□□□ -0.77
SHROOM4Q9ULL8 AL161616.1-201ENST00000611867 286 ntBASIC10.23□□□□□ -0.77
SHROOM4Q9ULL8 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC10.23□□□□□ -0.77
SHROOM4Q9ULL8 AC074101.1-201ENST00000637861 241 ntBASIC10.23□□□□□ -0.77
SHROOM4Q9ULL8 RFC1-217ENST00000639695 867 ntTSL 5 BASIC10.23□□□□□ -0.77
SHROOM4Q9ULL8 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC10.23□□□□□ -0.77
SHROOM4Q9ULL8 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SHROOM4Q9ULL8 DMD-211ENST00000378707 7410 ntTSL 5 BASIC10.23□□□□□ -0.77
SHROOM4Q9ULL8 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
SHROOM4Q9ULL8 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC10.23□□□□□ -0.77
SHROOM4Q9ULL8 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC10.23□□□□□ -0.77
SHROOM4Q9ULL8 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC10.23□□□□□ -0.77
SHROOM4Q9ULL8 AC092570.3-201ENST00000420113 693 ntBASIC10.23□□□□□ -0.77
SHROOM4Q9ULL8 AC073264.2-201ENST00000448886 166 ntBASIC10.23□□□□□ -0.77
SHROOM4Q9ULL8 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC10.23□□□□□ -0.77
SHROOM4Q9ULL8 RNA5SP373-201ENST00000517271 95 ntBASIC10.23□□□□□ -0.77
SHROOM4Q9ULL8 IGHVII-44-2-201ENST00000517728 250 ntBASIC10.23□□□□□ -0.77
SHROOM4Q9ULL8 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC10.23□□□□□ -0.77
SHROOM4Q9ULL8 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC10.23□□□□□ -0.77
SHROOM4Q9ULL8 AC073575.2-201ENST00000614212 627 ntBASIC10.23□□□□□ -0.77
SHROOM4Q9ULL8 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SHROOM4Q9ULL8 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
SHROOM4Q9ULL8 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SHROOM4Q9ULL8 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC10.22□□□□□ -0.77
SHROOM4Q9ULL8 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
SHROOM4Q9ULL8 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
SHROOM4Q9ULL8 AC034229.2-201ENST00000566945 2508 ntBASIC10.22□□□□□ -0.77
SHROOM4Q9ULL8 THAP12P4-201ENST00000528321 2266 ntBASIC10.22□□□□□ -0.77
SHROOM4Q9ULL8 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SHROOM4Q9ULL8 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC10.22□□□□□ -0.77
SHROOM4Q9ULL8 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SHROOM4Q9ULL8 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms