Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC4.83□□□□□ -1.64
CLCF1Q9UBD9 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CLCF1Q9UBD9 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CLCF1Q9UBD9 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC4.83□□□□□ -1.64
CLCF1Q9UBD9 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CLCF1Q9UBD9 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC4.83□□□□□ -1.64
CLCF1Q9UBD9 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC4.83□□□□□ -1.64
CLCF1Q9UBD9 SNORA67-201ENST00000384423 137 ntBASIC4.83□□□□□ -1.64
CLCF1Q9UBD9 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
CLCF1Q9UBD9 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC4.83□□□□□ -1.64
CLCF1Q9UBD9 RN7SKP17-201ENST00000411242 351 ntBASIC4.83□□□□□ -1.64
CLCF1Q9UBD9 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.83□□□□□ -1.64
CLCF1Q9UBD9 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC4.83□□□□□ -1.64
CLCF1Q9UBD9 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC4.83□□□□□ -1.64
CLCF1Q9UBD9 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC4.83□□□□□ -1.64
CLCF1Q9UBD9 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC4.83□□□□□ -1.64
CLCF1Q9UBD9 LINC02210-201ENST00000444561 288 ntBASIC4.83□□□□□ -1.64
CLCF1Q9UBD9 GAPDHP25-201ENST00000447061 1001 ntBASIC4.83□□□□□ -1.64
CLCF1Q9UBD9 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC4.83□□□□□ -1.64
CLCF1Q9UBD9 AC083899.1-201ENST00000454465 3819 ntBASIC4.83□□□□□ -1.64
CLCF1Q9UBD9 AC005532.2-201ENST00000467154 373 ntBASIC4.83□□□□□ -1.64
CLCF1Q9UBD9 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC4.83□□□□□ -1.64
CLCF1Q9UBD9 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CLCF1Q9UBD9 RPL7P6-201ENST00000480903 738 ntBASIC4.83□□□□□ -1.64
CLCF1Q9UBD9 AC072052.1-201ENST00000496556 306 ntBASIC4.83□□□□□ -1.64
CLCF1Q9UBD9 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC4.83□□□□□ -1.64
CLCF1Q9UBD9 AC109464.1-201ENST00000511091 819 ntBASIC4.83□□□□□ -1.64
CLCF1Q9UBD9 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC4.83□□□□□ -1.64
CLCF1Q9UBD9 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC4.83□□□□□ -1.64
CLCF1Q9UBD9 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.83□□□□□ -1.64
CLCF1Q9UBD9 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC4.83□□□□□ -1.64
CLCF1Q9UBD9 RNU6-941P-201ENST00000516346 108 ntBASIC4.83□□□□□ -1.64
CLCF1Q9UBD9 AC084824.2-201ENST00000548906 345 ntBASIC4.83□□□□□ -1.64
CLCF1Q9UBD9 NPM1P5-201ENST00000557228 838 ntBASIC4.83□□□□□ -1.64
CLCF1Q9UBD9 WDR61-205ENST00000558459 884 ntTSL 3 BASIC4.83□□□□□ -1.64
CLCF1Q9UBD9 RPL10P14-201ENST00000565265 298 ntBASIC4.83□□□□□ -1.64
CLCF1Q9UBD9 AC106730.2-201ENST00000566641 540 ntBASIC4.83□□□□□ -1.64
CLCF1Q9UBD9 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CLCF1Q9UBD9 AC005341.1-201ENST00000571086 708 ntBASIC4.83□□□□□ -1.64
CLCF1Q9UBD9 AC090286.3-201ENST00000573133 187 ntBASIC4.83□□□□□ -1.64
CLCF1Q9UBD9 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.83□□□□□ -1.64
CLCF1Q9UBD9 MIR4433B-201ENST00000581329 102 ntBASIC4.83□□□□□ -1.64
CLCF1Q9UBD9 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC4.83□□□□□ -1.64
CLCF1Q9UBD9 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC4.83□□□□□ -1.64
CLCF1Q9UBD9 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.83□□□□□ -1.64
CLCF1Q9UBD9 BX323046.1-201ENST00000610145 535 ntBASIC4.83□□□□□ -1.64
CLCF1Q9UBD9 AC126915.2-201ENST00000610957 190 ntBASIC4.83□□□□□ -1.64
CLCF1Q9UBD9 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC4.83□□□□□ -1.64
CLCF1Q9UBD9 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.83□□□□□ -1.64
CLCF1Q9UBD9 AC000095.2-202ENST00000637415 154 ntBASIC4.83□□□□□ -1.64
CLCF1Q9UBD9 AC074101.1-201ENST00000637861 241 ntBASIC4.83□□□□□ -1.64
CLCF1Q9UBD9 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CLCF1Q9UBD9 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CLCF1Q9UBD9 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC4.83□□□□□ -1.64
CLCF1Q9UBD9 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC4.83□□□□□ -1.64
CLCF1Q9UBD9 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CLCF1Q9UBD9 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC4.83□□□□□ -1.64
CLCF1Q9UBD9 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CLCF1Q9UBD9 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
CLCF1Q9UBD9 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CLCF1Q9UBD9 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CLCF1Q9UBD9 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
CLCF1Q9UBD9 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CLCF1Q9UBD9 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CLCF1Q9UBD9 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC4.82□□□□□ -1.64
CLCF1Q9UBD9 AL132656.3-201ENST00000606384 1595 ntBASIC4.82□□□□□ -1.64
CLCF1Q9UBD9 AC125336.1-201ENST00000508893 2827 ntBASIC4.82□□□□□ -1.64
CLCF1Q9UBD9 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC4.82□□□□□ -1.64
CLCF1Q9UBD9 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.82□□□□□ -1.64
CLCF1Q9UBD9 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
CLCF1Q9UBD9 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CLCF1Q9UBD9 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CLCF1Q9UBD9 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CLCF1Q9UBD9 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC4.82□□□□□ -1.64
CLCF1Q9UBD9 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC4.82□□□□□ -1.64
CLCF1Q9UBD9 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CLCF1Q9UBD9 CASC19-260ENST00000641828 2001 ntBASIC4.82□□□□□ -1.64
CLCF1Q9UBD9 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CLCF1Q9UBD9 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CLCF1Q9UBD9 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CLCF1Q9UBD9 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CLCF1Q9UBD9 RNU1-149P-201ENST00000390870 161 ntBASIC4.82□□□□□ -1.64
CLCF1Q9UBD9 SPTLC1P2-201ENST00000407089 121 ntBASIC4.82□□□□□ -1.64
CLCF1Q9UBD9 RN7SKP273-201ENST00000411392 314 ntBASIC4.82□□□□□ -1.64
CLCF1Q9UBD9 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.82□□□□□ -1.64
CLCF1Q9UBD9 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC4.82□□□□□ -1.64
CLCF1Q9UBD9 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.82□□□□□ -1.64
CLCF1Q9UBD9 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC4.82□□□□□ -1.64
CLCF1Q9UBD9 AL035090.1-201ENST00000454835 332 ntBASIC4.82□□□□□ -1.64
CLCF1Q9UBD9 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC4.82□□□□□ -1.64
CLCF1Q9UBD9 AC008953.1-201ENST00000497334 318 ntBASIC4.82□□□□□ -1.64
CLCF1Q9UBD9 AC112184.1-201ENST00000505179 312 ntBASIC4.82□□□□□ -1.64
CLCF1Q9UBD9 AC021106.1-201ENST00000509020 1058 ntBASIC4.82□□□□□ -1.64
CLCF1Q9UBD9 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC4.82□□□□□ -1.64
CLCF1Q9UBD9 AP004607.2-201ENST00000533949 322 ntBASIC4.82□□□□□ -1.64
CLCF1Q9UBD9 ASB8-215ENST00000540782 659 ntTSL 3 BASIC4.82□□□□□ -1.64
CLCF1Q9UBD9 HAUS8P1-201ENST00000549005 542 ntBASIC4.82□□□□□ -1.64
CLCF1Q9UBD9 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CLCF1Q9UBD9 NMNAT1P5-201ENST00000559657 841 ntBASIC4.82□□□□□ -1.64
CLCF1Q9UBD9 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 595.7 ms