Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC6.4□□□□□ -1.38
COL20A1Q9P218 HMGB1P3-201ENST00000502802 616 ntBASIC6.4□□□□□ -1.38
COL20A1Q9P218 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
COL20A1Q9P218 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC6.4□□□□□ -1.38
COL20A1Q9P218 AC138701.1-201ENST00000524329 714 ntBASIC6.4□□□□□ -1.38
COL20A1Q9P218 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC6.4□□□□□ -1.38
COL20A1Q9P218 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.4□□□□□ -1.38
COL20A1Q9P218 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
COL20A1Q9P218 DHFRP1-201ENST00000579682 559 ntBASIC6.4□□□□□ -1.38
COL20A1Q9P218 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC6.4□□□□□ -1.38
COL20A1Q9P218 MIR1269B-201ENST00000580405 75 ntBASIC6.4□□□□□ -1.38
COL20A1Q9P218 AC012616.1-201ENST00000600294 197 ntBASIC6.4□□□□□ -1.38
COL20A1Q9P218 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC6.4□□□□□ -1.38
COL20A1Q9P218 AL513327.3-201ENST00000602618 469 ntBASIC6.4□□□□□ -1.38
COL20A1Q9P218 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
COL20A1Q9P218 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC6.4□□□□□ -1.38
COL20A1Q9P218 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.4□□□□□ -1.39
COL20A1Q9P218 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.4□□□□□ -1.39
COL20A1Q9P218 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
COL20A1Q9P218 AC087516.1-201ENST00000561236 2428 ntBASIC6.4□□□□□ -1.39
COL20A1Q9P218 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.39
COL20A1Q9P218 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.4□□□□□ -1.39
COL20A1Q9P218 AL356317.1-201ENST00000396110 1436 ntBASIC6.4□□□□□ -1.39
COL20A1Q9P218 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.4□□□□□ -1.39
COL20A1Q9P218 AL022323.4-201ENST00000623980 13120 ntBASIC6.4□□□□□ -1.39
COL20A1Q9P218 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC6.39□□□□□ -1.39
COL20A1Q9P218 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.39□□□□□ -1.39
COL20A1Q9P218 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
COL20A1Q9P218 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
COL20A1Q9P218 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.39□□□□□ -1.39
COL20A1Q9P218 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.39□□□□□ -1.39
COL20A1Q9P218 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC6.39□□□□□ -1.39
COL20A1Q9P218 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC6.39□□□□□ -1.39
COL20A1Q9P218 AL121977.1-201ENST00000401636 979 ntBASIC6.39□□□□□ -1.39
COL20A1Q9P218 MTND4LP17-201ENST00000414607 293 ntBASIC6.39□□□□□ -1.39
COL20A1Q9P218 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
COL20A1Q9P218 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC6.39□□□□□ -1.39
COL20A1Q9P218 PTP4A1P3-201ENST00000433661 420 ntBASIC6.39□□□□□ -1.39
COL20A1Q9P218 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC6.39□□□□□ -1.39
COL20A1Q9P218 MOB1AP2-201ENST00000446060 614 ntBASIC6.39□□□□□ -1.39
COL20A1Q9P218 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC6.39□□□□□ -1.39
COL20A1Q9P218 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC6.39□□□□□ -1.39
COL20A1Q9P218 RN7SL799P-201ENST00000475891 298 ntBASIC6.39□□□□□ -1.39
COL20A1Q9P218 NPM1P17-201ENST00000479221 602 ntBASIC6.39□□□□□ -1.39
COL20A1Q9P218 RPEP1-201ENST00000504507 658 ntBASIC6.39□□□□□ -1.39
COL20A1Q9P218 AC008638.1-201ENST00000506035 866 ntBASIC6.39□□□□□ -1.39
COL20A1Q9P218 MTCO1P31-201ENST00000506355 492 ntBASIC6.39□□□□□ -1.39
COL20A1Q9P218 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC6.39□□□□□ -1.39
COL20A1Q9P218 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC6.39□□□□□ -1.39
COL20A1Q9P218 AC027308.1-201ENST00000517993 110 ntBASIC6.39□□□□□ -1.39
COL20A1Q9P218 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC6.39□□□□□ -1.39
COL20A1Q9P218 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC6.39□□□□□ -1.39
COL20A1Q9P218 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC6.39□□□□□ -1.39
COL20A1Q9P218 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC6.39□□□□□ -1.39
COL20A1Q9P218 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC6.39□□□□□ -1.39
COL20A1Q9P218 MIR4311-201ENST00000580794 100 ntBASIC6.39□□□□□ -1.39
COL20A1Q9P218 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
COL20A1Q9P218 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC6.39□□□□□ -1.39
COL20A1Q9P218 AC133794.1-201ENST00000602731 914 ntBASIC6.39□□□□□ -1.39
COL20A1Q9P218 MIR1264-201ENST00000616374 69 ntBASIC6.39□□□□□ -1.39
COL20A1Q9P218 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
COL20A1Q9P218 AC136428.4-201ENST00000634254 1155 ntBASIC6.39□□□□□ -1.39
COL20A1Q9P218 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC6.39□□□□□ -1.39
COL20A1Q9P218 LINC01963-201ENST00000562038 3148 ntBASIC6.39□□□□□ -1.39
COL20A1Q9P218 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
COL20A1Q9P218 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.39□□□□□ -1.39
COL20A1Q9P218 AC005261.2-201ENST00000593427 4258 ntBASIC6.39□□□□□ -1.39
COL20A1Q9P218 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
COL20A1Q9P218 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
COL20A1Q9P218 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC6.38□□□□□ -1.39
COL20A1Q9P218 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
COL20A1Q9P218 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
COL20A1Q9P218 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
COL20A1Q9P218 AC068769.1-201ENST00000474767 2426 ntBASIC6.38□□□□□ -1.39
COL20A1Q9P218 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
COL20A1Q9P218 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
COL20A1Q9P218 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC6.38□□□□□ -1.39
COL20A1Q9P218 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.38□□□□□ -1.39
COL20A1Q9P218 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC6.38□□□□□ -1.39
COL20A1Q9P218 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
COL20A1Q9P218 RNA5SP326-201ENST00000363209 110 ntBASIC6.38□□□□□ -1.39
COL20A1Q9P218 SNORA72.3-201ENST00000365074 132 ntBASIC6.38□□□□□ -1.39
COL20A1Q9P218 DPPA2P3-201ENST00000411853 655 ntBASIC6.38□□□□□ -1.39
COL20A1Q9P218 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC6.38□□□□□ -1.39
COL20A1Q9P218 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
COL20A1Q9P218 LDHAP2-201ENST00000437325 985 ntBASIC6.38□□□□□ -1.39
COL20A1Q9P218 CYCSP12-201ENST00000437729 300 ntBASIC6.38□□□□□ -1.39
COL20A1Q9P218 AL138787.1-202ENST00000437804 898 ntBASIC6.38□□□□□ -1.39
COL20A1Q9P218 AL627224.1-201ENST00000448334 444 ntBASIC6.38□□□□□ -1.39
COL20A1Q9P218 RPS26P41-201ENST00000450370 284 ntBASIC6.38□□□□□ -1.39
COL20A1Q9P218 RN7SL515P-201ENST00000463999 297 ntBASIC6.38□□□□□ -1.39
COL20A1Q9P218 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC6.38□□□□□ -1.39
COL20A1Q9P218 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC6.38□□□□□ -1.39
COL20A1Q9P218 TPT1P8-201ENST00000510120 555 ntBASIC6.38□□□□□ -1.39
COL20A1Q9P218 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC6.38□□□□□ -1.39
COL20A1Q9P218 BX510359.5-201ENST00000515651 304 ntBASIC6.38□□□□□ -1.39
COL20A1Q9P218 RNA5SP34-201ENST00000516887 130 ntBASIC6.38□□□□□ -1.39
COL20A1Q9P218 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC6.38□□□□□ -1.39
COL20A1Q9P218 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
COL20A1Q9P218 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms