Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
KIAA1549Q9HCM3 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
KIAA1549Q9HCM3 SAMM50P1-201ENST00000455403 1399 ntBASIC4.77□□□□□ -1.65
KIAA1549Q9HCM3 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC4.76□□□□□ -1.65
KIAA1549Q9HCM3 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
KIAA1549Q9HCM3 AL009179.1-201ENST00000406085 265 ntBASIC4.76□□□□□ -1.65
KIAA1549Q9HCM3 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.76□□□□□ -1.65
KIAA1549Q9HCM3 RN7SKP125-201ENST00000410481 302 ntBASIC4.76□□□□□ -1.65
KIAA1549Q9HCM3 AL590762.4-201ENST00000425885 253 ntBASIC4.76□□□□□ -1.65
KIAA1549Q9HCM3 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC4.76□□□□□ -1.65
KIAA1549Q9HCM3 AC091685.2-201ENST00000454924 864 ntBASIC4.76□□□□□ -1.65
KIAA1549Q9HCM3 AC108161.1-201ENST00000461060 402 ntBASIC4.76□□□□□ -1.65
KIAA1549Q9HCM3 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC4.76□□□□□ -1.65
KIAA1549Q9HCM3 RPL7P41-201ENST00000485823 957 ntBASIC4.76□□□□□ -1.65
KIAA1549Q9HCM3 AC004453.1-201ENST00000487895 408 ntBASIC4.76□□□□□ -1.65
KIAA1549Q9HCM3 RN7SL591P-201ENST00000496150 292 ntBASIC4.76□□□□□ -1.65
KIAA1549Q9HCM3 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC4.76□□□□□ -1.65
KIAA1549Q9HCM3 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
KIAA1549Q9HCM3 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.76□□□□□ -1.65
KIAA1549Q9HCM3 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.76□□□□□ -1.65
KIAA1549Q9HCM3 AC005252.1-201ENST00000604518 1063 ntBASIC4.76□□□□□ -1.65
KIAA1549Q9HCM3 AC118658.2-201ENST00000618697 459 ntBASIC4.76□□□□□ -1.65
KIAA1549Q9HCM3 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
KIAA1549Q9HCM3 AC020763.5-201ENST00000623298 430 ntBASIC4.76□□□□□ -1.65
KIAA1549Q9HCM3 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC4.76□□□□□ -1.65
KIAA1549Q9HCM3 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
KIAA1549Q9HCM3 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
KIAA1549Q9HCM3 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
KIAA1549Q9HCM3 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
KIAA1549Q9HCM3 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
KIAA1549Q9HCM3 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC4.76□□□□□ -1.65
KIAA1549Q9HCM3 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
KIAA1549Q9HCM3 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
KIAA1549Q9HCM3 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
KIAA1549Q9HCM3 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
KIAA1549Q9HCM3 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
KIAA1549Q9HCM3 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
KIAA1549Q9HCM3 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
KIAA1549Q9HCM3 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
KIAA1549Q9HCM3 OR9G4-201ENST00000302957 984 ntBASIC4.76□□□□□ -1.65
KIAA1549Q9HCM3 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
KIAA1549Q9HCM3 RPL21P67-201ENST00000402896 478 ntBASIC4.76□□□□□ -1.65
KIAA1549Q9HCM3 RBMY2KP-201ENST00000418221 992 ntBASIC4.76□□□□□ -1.65
KIAA1549Q9HCM3 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC4.76□□□□□ -1.65
KIAA1549Q9HCM3 AC124944.2-201ENST00000429866 1242 ntBASIC4.76□□□□□ -1.65
KIAA1549Q9HCM3 AC090114.3-201ENST00000479267 829 ntBASIC4.76□□□□□ -1.65
KIAA1549Q9HCM3 AC147055.3-201ENST00000510547 851 ntBASIC4.76□□□□□ -1.65
KIAA1549Q9HCM3 SCARNA16.4-201ENST00000516956 187 ntBASIC4.76□□□□□ -1.65
KIAA1549Q9HCM3 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC4.76□□□□□ -1.65
KIAA1549Q9HCM3 HMGB1P40-201ENST00000525121 540 ntBASIC4.76□□□□□ -1.65
KIAA1549Q9HCM3 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.76□□□□□ -1.65
KIAA1549Q9HCM3 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC4.76□□□□□ -1.65
KIAA1549Q9HCM3 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.76□□□□□ -1.65
KIAA1549Q9HCM3 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
KIAA1549Q9HCM3 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
KIAA1549Q9HCM3 C4orf33-202ENST00000425929 1588 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
KIAA1549Q9HCM3 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
KIAA1549Q9HCM3 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC4.75□□□□□ -1.65
KIAA1549Q9HCM3 AC092451.3-201ENST00000625067 1343 ntBASIC4.75□□□□□ -1.65
KIAA1549Q9HCM3 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
KIAA1549Q9HCM3 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
KIAA1549Q9HCM3 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC4.75□□□□□ -1.65
KIAA1549Q9HCM3 MIR105-1-201ENST00000385222 81 ntBASIC4.75□□□□□ -1.65
KIAA1549Q9HCM3 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC4.75□□□□□ -1.65
KIAA1549Q9HCM3 AP000534.2-201ENST00000412729 568 ntBASIC4.75□□□□□ -1.65
KIAA1549Q9HCM3 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC4.75□□□□□ -1.65
KIAA1549Q9HCM3 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.75□□□□□ -1.65
KIAA1549Q9HCM3 AC084824.2-201ENST00000548906 345 ntBASIC4.75□□□□□ -1.65
KIAA1549Q9HCM3 MIR4436B2-201ENST00000581415 91 ntBASIC4.75□□□□□ -1.65
KIAA1549Q9HCM3 MIR4436B1-201ENST00000583272 91 ntBASIC4.75□□□□□ -1.65
KIAA1549Q9HCM3 MIR7853-201ENST00000584820 132 ntBASIC4.75□□□□□ -1.65
KIAA1549Q9HCM3 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC4.75□□□□□ -1.65
KIAA1549Q9HCM3 AC015660.5-201ENST00000623238 564 ntBASIC4.75□□□□□ -1.65
KIAA1549Q9HCM3 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.75□□□□□ -1.65
KIAA1549Q9HCM3 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
KIAA1549Q9HCM3 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
KIAA1549Q9HCM3 AC053481.2-202ENST00000582394 1500 ntBASIC4.75□□□□□ -1.65
KIAA1549Q9HCM3 AP000473.2-201ENST00000602659 1537 ntBASIC4.75□□□□□ -1.65
KIAA1549Q9HCM3 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
KIAA1549Q9HCM3 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
KIAA1549Q9HCM3 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
KIAA1549Q9HCM3 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
KIAA1549Q9HCM3 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
KIAA1549Q9HCM3 WAC-209ENST00000428935 1320 ntTSL 2 BASIC4.75□□□□□ -1.65
KIAA1549Q9HCM3 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
KIAA1549Q9HCM3 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
KIAA1549Q9HCM3 AC103591.2-201ENST00000265259 766 ntBASIC4.74□□□□□ -1.65
KIAA1549Q9HCM3 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
KIAA1549Q9HCM3 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
KIAA1549Q9HCM3 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.74□□□□□ -1.65
KIAA1549Q9HCM3 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.74□□□□□ -1.65
KIAA1549Q9HCM3 HSPD1P12-201ENST00000429127 1069 ntBASIC4.74□□□□□ -1.65
KIAA1549Q9HCM3 RPL12P3-201ENST00000440080 396 ntBASIC4.74□□□□□ -1.65
KIAA1549Q9HCM3 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.74□□□□□ -1.65
KIAA1549Q9HCM3 RPL34P20-201ENST00000442771 351 ntBASIC4.74□□□□□ -1.65
KIAA1549Q9HCM3 RPL35AP28-201ENST00000459730 331 ntBASIC4.74□□□□□ -1.65
KIAA1549Q9HCM3 RN7SL447P-201ENST00000494711 245 ntBASIC4.74□□□□□ -1.65
KIAA1549Q9HCM3 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
KIAA1549Q9HCM3 AC021193.1-201ENST00000511607 420 ntBASIC4.74□□□□□ -1.65
KIAA1549Q9HCM3 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms