Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 Z83838.1-202ENST00000456225 839 ntBASIC5.71□□□□□ -1.5
AMBRA1Q9C0C7 NDUFA5P9-201ENST00000472609 340 ntBASIC5.71□□□□□ -1.5
AMBRA1Q9C0C7 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC5.71□□□□□ -1.5
AMBRA1Q9C0C7 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
AMBRA1Q9C0C7 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC5.71□□□□□ -1.5
AMBRA1Q9C0C7 AC113420.1-201ENST00000507903 571 ntBASIC5.71□□□□□ -1.5
AMBRA1Q9C0C7 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC5.71□□□□□ -1.5
AMBRA1Q9C0C7 TOMM22P4-201ENST00000511318 336 ntBASIC5.71□□□□□ -1.5
AMBRA1Q9C0C7 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
AMBRA1Q9C0C7 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC5.71□□□□□ -1.5
AMBRA1Q9C0C7 SNORA74.1-201ENST00000516320 180 ntBASIC5.71□□□□□ -1.5
AMBRA1Q9C0C7 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.71□□□□□ -1.5
AMBRA1Q9C0C7 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.71□□□□□ -1.5
AMBRA1Q9C0C7 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC5.71□□□□□ -1.5
AMBRA1Q9C0C7 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.71□□□□□ -1.5
AMBRA1Q9C0C7 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC5.71□□□□□ -1.5
AMBRA1Q9C0C7 EMP1-206ENST00000537612 505 ntTSL 3 BASIC5.71□□□□□ -1.5
AMBRA1Q9C0C7 OLR1-209ENST00000543993 822 ntTSL 2 BASIC5.71□□□□□ -1.5
AMBRA1Q9C0C7 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC5.71□□□□□ -1.5
AMBRA1Q9C0C7 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC5.71□□□□□ -1.5
AMBRA1Q9C0C7 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.71□□□□□ -1.5
AMBRA1Q9C0C7 AC002310.3-201ENST00000569728 723 ntBASIC5.71□□□□□ -1.5
AMBRA1Q9C0C7 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC5.71□□□□□ -1.5
AMBRA1Q9C0C7 RNU4ATAC-201ENST00000580972 127 ntBASIC5.71□□□□□ -1.5
AMBRA1Q9C0C7 AC008088.1-201ENST00000580993 280 ntBASIC5.71□□□□□ -1.5
AMBRA1Q9C0C7 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC5.71□□□□□ -1.5
AMBRA1Q9C0C7 SUMO2P14-201ENST00000604488 293 ntBASIC5.71□□□□□ -1.5
AMBRA1Q9C0C7 AC011891.2-201ENST00000604949 397 ntBASIC5.71□□□□□ -1.5
AMBRA1Q9C0C7 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC5.71□□□□□ -1.5
AMBRA1Q9C0C7 AC100847.1-201ENST00000611316 481 ntBASIC5.71□□□□□ -1.5
AMBRA1Q9C0C7 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
AMBRA1Q9C0C7 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC5.71□□□□□ -1.5
AMBRA1Q9C0C7 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC5.71□□□□□ -1.5
AMBRA1Q9C0C7 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.71□□□□□ -1.5
AMBRA1Q9C0C7 AC104985.3-201ENST00000623479 597 ntBASIC5.71□□□□□ -1.5
AMBRA1Q9C0C7 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC5.71□□□□□ -1.5
AMBRA1Q9C0C7 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
AMBRA1Q9C0C7 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.5
AMBRA1Q9C0C7 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
AMBRA1Q9C0C7 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
AMBRA1Q9C0C7 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
AMBRA1Q9C0C7 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.71□□□□□ -1.5
AMBRA1Q9C0C7 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.71□□□□□ -1.5
AMBRA1Q9C0C7 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.71□□□□□ -1.5
AMBRA1Q9C0C7 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
AMBRA1Q9C0C7 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.71□□□□□ -1.5
AMBRA1Q9C0C7 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
AMBRA1Q9C0C7 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.7□□□□□ -1.5
AMBRA1Q9C0C7 AC079298.1-201ENST00000625026 1619 ntBASIC5.7□□□□□ -1.5
AMBRA1Q9C0C7 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.7□□□□□ -1.5
AMBRA1Q9C0C7 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.7□□□□□ -1.5
AMBRA1Q9C0C7 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
AMBRA1Q9C0C7 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
AMBRA1Q9C0C7 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC5.7□□□□□ -1.5
AMBRA1Q9C0C7 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
AMBRA1Q9C0C7 LINC01613-201ENST00000561476 2780 ntBASIC5.7□□□□□ -1.5
AMBRA1Q9C0C7 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.7□□□□□ -1.5
AMBRA1Q9C0C7 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
AMBRA1Q9C0C7 SNORD56.4-201ENST00000363883 71 ntBASIC5.7□□□□□ -1.5
AMBRA1Q9C0C7 RNA5SP433-201ENST00000364491 114 ntBASIC5.7□□□□□ -1.5
AMBRA1Q9C0C7 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.7□□□□□ -1.5
AMBRA1Q9C0C7 ATP5F1P2-201ENST00000398143 760 ntBASIC5.7□□□□□ -1.5
AMBRA1Q9C0C7 AL603865.2-201ENST00000401679 213 ntBASIC5.7□□□□□ -1.5
AMBRA1Q9C0C7 RNA5SP198-201ENST00000410376 127 ntBASIC5.7□□□□□ -1.5
AMBRA1Q9C0C7 CDY17P-201ENST00000414121 1282 ntBASIC5.7□□□□□ -1.5
AMBRA1Q9C0C7 RPL21P50-201ENST00000417698 477 ntBASIC5.7□□□□□ -1.5
AMBRA1Q9C0C7 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.7□□□□□ -1.5
AMBRA1Q9C0C7 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC5.7□□□□□ -1.5
AMBRA1Q9C0C7 CDY8P-201ENST00000428380 1279 ntBASIC5.7□□□□□ -1.5
AMBRA1Q9C0C7 HIGD1AP4-201ENST00000430194 280 ntBASIC5.7□□□□□ -1.5
AMBRA1Q9C0C7 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC5.7□□□□□ -1.5
AMBRA1Q9C0C7 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5.7□□□□□ -1.5
AMBRA1Q9C0C7 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC5.7□□□□□ -1.5
AMBRA1Q9C0C7 CDY20P-201ENST00000447528 1279 ntBASIC5.7□□□□□ -1.5
AMBRA1Q9C0C7 PPIAP20-201ENST00000449839 135 ntBASIC5.7□□□□□ -1.5
AMBRA1Q9C0C7 Z95152.1-201ENST00000453556 656 ntBASIC5.7□□□□□ -1.5
AMBRA1Q9C0C7 VN1R40P-201ENST00000455196 941 ntBASIC5.7□□□□□ -1.5
AMBRA1Q9C0C7 AC094085.1-201ENST00000468914 584 ntBASIC5.7□□□□□ -1.5
AMBRA1Q9C0C7 AC004263.1-201ENST00000479327 332 ntBASIC5.7□□□□□ -1.5
AMBRA1Q9C0C7 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
AMBRA1Q9C0C7 RPL21P131-201ENST00000497298 483 ntBASIC5.7□□□□□ -1.5
AMBRA1Q9C0C7 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC5.7□□□□□ -1.5
AMBRA1Q9C0C7 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
AMBRA1Q9C0C7 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.7□□□□□ -1.5
AMBRA1Q9C0C7 AC011411.1-201ENST00000509592 876 ntBASIC5.7□□□□□ -1.5
AMBRA1Q9C0C7 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC5.7□□□□□ -1.5
AMBRA1Q9C0C7 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC5.7□□□□□ -1.5
AMBRA1Q9C0C7 AC093816.1-201ENST00000515076 913 ntBASIC5.7□□□□□ -1.5
AMBRA1Q9C0C7 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC5.7□□□□□ -1.5
AMBRA1Q9C0C7 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC5.7□□□□□ -1.5
AMBRA1Q9C0C7 OSBPL9P5-201ENST00000542581 171 ntBASIC5.7□□□□□ -1.5
AMBRA1Q9C0C7 AC008055.1-201ENST00000547032 609 ntBASIC5.7□□□□□ -1.5
AMBRA1Q9C0C7 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.7□□□□□ -1.5
AMBRA1Q9C0C7 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC5.7□□□□□ -1.5
AMBRA1Q9C0C7 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.7□□□□□ -1.5
AMBRA1Q9C0C7 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC5.7□□□□□ -1.5
AMBRA1Q9C0C7 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC5.7□□□□□ -1.5
AMBRA1Q9C0C7 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC5.7□□□□□ -1.5
AMBRA1Q9C0C7 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
AMBRA1Q9C0C7 AC025588.2-201ENST00000604851 466 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 159 ms