Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 OR6E1P-201ENST00000414424 923 ntBASIC6.45□□□□□ -1.38
UPF3BQ9BZI7 EIF4A1P7-201ENST00000421800 1220 ntBASIC6.45□□□□□ -1.38
UPF3BQ9BZI7 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC6.45□□□□□ -1.38
UPF3BQ9BZI7 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC6.45□□□□□ -1.38
UPF3BQ9BZI7 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC6.45□□□□□ -1.38
UPF3BQ9BZI7 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC6.45□□□□□ -1.38
UPF3BQ9BZI7 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC6.45□□□□□ -1.38
UPF3BQ9BZI7 AC138866.2-201ENST00000508650 584 ntBASIC6.45□□□□□ -1.38
UPF3BQ9BZI7 AC026782.2-201ENST00000510845 636 ntBASIC6.45□□□□□ -1.38
UPF3BQ9BZI7 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC6.45□□□□□ -1.38
UPF3BQ9BZI7 HIGD1AP5-201ENST00000529959 259 ntBASIC6.45□□□□□ -1.38
UPF3BQ9BZI7 RBM22P12-201ENST00000567098 1255 ntBASIC6.45□□□□□ -1.38
UPF3BQ9BZI7 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
UPF3BQ9BZI7 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
UPF3BQ9BZI7 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
UPF3BQ9BZI7 AC244107.2-201ENST00000611773 76 ntBASIC6.45□□□□□ -1.38
UPF3BQ9BZI7 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC6.45□□□□□ -1.38
UPF3BQ9BZI7 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC6.45□□□□□ -1.38
UPF3BQ9BZI7 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC6.45□□□□□ -1.38
UPF3BQ9BZI7 AC099654.6-201ENST00000636487 512 ntBASIC6.45□□□□□ -1.38
UPF3BQ9BZI7 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
UPF3BQ9BZI7 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
UPF3BQ9BZI7 AL022311.1-201ENST00000623726 19416 ntBASIC6.45□□□□□ -1.38
UPF3BQ9BZI7 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
UPF3BQ9BZI7 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
UPF3BQ9BZI7 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
UPF3BQ9BZI7 GVINP1-202ENST00000531871 7271 ntBASIC6.45□□□□□ -1.38
UPF3BQ9BZI7 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC6.44□□□□□ -1.38
UPF3BQ9BZI7 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
UPF3BQ9BZI7 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC6.44□□□□□ -1.38
UPF3BQ9BZI7 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC6.44□□□□□ -1.38
UPF3BQ9BZI7 AC005261.2-201ENST00000593427 4258 ntBASIC6.44□□□□□ -1.38
UPF3BQ9BZI7 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC6.44□□□□□ -1.38
UPF3BQ9BZI7 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC6.44□□□□□ -1.38
UPF3BQ9BZI7 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
UPF3BQ9BZI7 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
UPF3BQ9BZI7 RNA5SP46-201ENST00000362370 120 ntBASIC6.44□□□□□ -1.38
UPF3BQ9BZI7 RNA5SP241-201ENST00000391326 114 ntBASIC6.44□□□□□ -1.38
UPF3BQ9BZI7 DBIP1-201ENST00000401435 260 ntBASIC6.44□□□□□ -1.38
UPF3BQ9BZI7 GAPDHP42-201ENST00000406848 981 ntBASIC6.44□□□□□ -1.38
UPF3BQ9BZI7 RPL37P18-201ENST00000411602 243 ntBASIC6.44□□□□□ -1.38
UPF3BQ9BZI7 AC092017.2-201ENST00000427600 362 ntBASIC6.44□□□□□ -1.38
UPF3BQ9BZI7 NPM1P25-201ENST00000429734 854 ntBASIC6.44□□□□□ -1.38
UPF3BQ9BZI7 AC090804.1-201ENST00000448870 490 ntBASIC6.44□□□□□ -1.38
UPF3BQ9BZI7 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC6.44□□□□□ -1.38
UPF3BQ9BZI7 LDHBP2-201ENST00000456969 1005 ntBASIC6.44□□□□□ -1.38
UPF3BQ9BZI7 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC6.44□□□□□ -1.38
UPF3BQ9BZI7 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
UPF3BQ9BZI7 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
UPF3BQ9BZI7 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC6.44□□□□□ -1.38
UPF3BQ9BZI7 AC027216.1-201ENST00000577726 685 ntBASIC6.44□□□□□ -1.38
UPF3BQ9BZI7 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC6.44□□□□□ -1.38
UPF3BQ9BZI7 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC6.44□□□□□ -1.38
UPF3BQ9BZI7 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC6.44□□□□□ -1.38
UPF3BQ9BZI7 LSM1P2-201ENST00000604911 322 ntBASIC6.44□□□□□ -1.38
UPF3BQ9BZI7 AC026367.3-201ENST00000619032 590 ntBASIC6.44□□□□□ -1.38
UPF3BQ9BZI7 uc_338.7-201ENST00000621834 124 ntBASIC6.44□□□□□ -1.38
UPF3BQ9BZI7 C4BPAP1-201ENST00000415474 1893 ntBASIC6.44□□□□□ -1.38
UPF3BQ9BZI7 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
UPF3BQ9BZI7 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
UPF3BQ9BZI7 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC6.44□□□□□ -1.38
UPF3BQ9BZI7 AL590763.1-201ENST00000398297 1545 ntBASIC6.44□□□□□ -1.38
UPF3BQ9BZI7 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
UPF3BQ9BZI7 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC6.44□□□□□ -1.38
UPF3BQ9BZI7 AL450345.1-202ENST00000605741 3881 ntBASIC6.44□□□□□ -1.38
UPF3BQ9BZI7 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
UPF3BQ9BZI7 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC6.43□□□□□ -1.38
UPF3BQ9BZI7 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
UPF3BQ9BZI7 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC6.43□□□□□ -1.38
UPF3BQ9BZI7 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
UPF3BQ9BZI7 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC6.43□□□□□ -1.38
UPF3BQ9BZI7 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
UPF3BQ9BZI7 U3.23-201ENST00000391132 200 ntBASIC6.43□□□□□ -1.38
UPF3BQ9BZI7 ZSCAN12P1-201ENST00000406489 419 ntBASIC6.43□□□□□ -1.38
UPF3BQ9BZI7 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC6.43□□□□□ -1.38
UPF3BQ9BZI7 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
UPF3BQ9BZI7 VTI1BP4-201ENST00000427516 527 ntBASIC6.43□□□□□ -1.38
UPF3BQ9BZI7 ELOCP3-201ENST00000439303 348 ntBASIC6.43□□□□□ -1.38
UPF3BQ9BZI7 AL606490.1-201ENST00000452266 765 ntBASIC6.43□□□□□ -1.38
UPF3BQ9BZI7 RN7SL329P-201ENST00000467740 299 ntBASIC6.43□□□□□ -1.38
UPF3BQ9BZI7 OR2AO1P-201ENST00000476497 403 ntBASIC6.43□□□□□ -1.38
UPF3BQ9BZI7 AC093270.2-201ENST00000486157 792 ntBASIC6.43□□□□□ -1.38
UPF3BQ9BZI7 AC006499.3-201ENST00000506077 748 ntBASIC6.43□□□□□ -1.38
UPF3BQ9BZI7 MTND6P2-201ENST00000512226 524 ntBASIC6.43□□□□□ -1.38
UPF3BQ9BZI7 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC6.43□□□□□ -1.38
UPF3BQ9BZI7 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC6.43□□□□□ -1.38
UPF3BQ9BZI7 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC6.43□□□□□ -1.38
UPF3BQ9BZI7 AP004607.2-201ENST00000533949 322 ntBASIC6.43□□□□□ -1.38
UPF3BQ9BZI7 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
UPF3BQ9BZI7 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC6.43□□□□□ -1.38
UPF3BQ9BZI7 AL049872.1-201ENST00000556323 322 ntBASIC6.43□□□□□ -1.38
UPF3BQ9BZI7 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
UPF3BQ9BZI7 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC6.43□□□□□ -1.38
UPF3BQ9BZI7 AC093671.1-201ENST00000624981 2929 ntBASIC6.43□□□□□ -1.38
UPF3BQ9BZI7 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
UPF3BQ9BZI7 AC109780.1-201ENST00000451768 1344 ntBASIC6.43□□□□□ -1.38
UPF3BQ9BZI7 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
UPF3BQ9BZI7 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
UPF3BQ9BZI7 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC6.43□□□□□ -1.38
UPF3BQ9BZI7 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms