Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.86□□□□□ -1.47
VPS50Q96JG6 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC5.86□□□□□ -1.47
VPS50Q96JG6 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.86□□□□□ -1.47
VPS50Q96JG6 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
VPS50Q96JG6 AC067773.1-201ENST00000603284 1094 ntBASIC5.86□□□□□ -1.47
VPS50Q96JG6 AC006946.3-201ENST00000609791 756 ntBASIC5.86□□□□□ -1.47
VPS50Q96JG6 AL080312.2-201ENST00000613001 630 ntBASIC5.86□□□□□ -1.47
VPS50Q96JG6 RMST_5.1-201ENST00000618704 126 ntBASIC5.86□□□□□ -1.47
VPS50Q96JG6 AC084824.4-201ENST00000620106 731 ntBASIC5.86□□□□□ -1.47
VPS50Q96JG6 AC007275.1-201ENST00000621243 671 ntBASIC5.86□□□□□ -1.47
VPS50Q96JG6 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC5.86□□□□□ -1.47
VPS50Q96JG6 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.86□□□□□ -1.47
VPS50Q96JG6 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.86□□□□□ -1.47
VPS50Q96JG6 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC5.86□□□□□ -1.47
VPS50Q96JG6 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.86□□□□□ -1.47
VPS50Q96JG6 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
VPS50Q96JG6 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
VPS50Q96JG6 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.86□□□□□ -1.47
VPS50Q96JG6 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.86□□□□□ -1.47
VPS50Q96JG6 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.86□□□□□ -1.47
VPS50Q96JG6 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
VPS50Q96JG6 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
VPS50Q96JG6 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.85□□□□□ -1.47
VPS50Q96JG6 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
VPS50Q96JG6 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
VPS50Q96JG6 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.85□□□□□ -1.47
VPS50Q96JG6 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
VPS50Q96JG6 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.85□□□□□ -1.47
VPS50Q96JG6 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.85□□□□□ -1.47
VPS50Q96JG6 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.85□□□□□ -1.47
VPS50Q96JG6 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
VPS50Q96JG6 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
VPS50Q96JG6 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.85□□□□□ -1.47
VPS50Q96JG6 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
VPS50Q96JG6 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
VPS50Q96JG6 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
VPS50Q96JG6 EIF3EP1-201ENST00000433978 1316 ntBASIC5.85□□□□□ -1.47
VPS50Q96JG6 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
VPS50Q96JG6 SNORD1C-201ENST00000363315 78 ntBASIC5.85□□□□□ -1.47
VPS50Q96JG6 RNA5SP435-201ENST00000364044 108 ntBASIC5.85□□□□□ -1.47
VPS50Q96JG6 RN7SKP275-201ENST00000364626 301 ntBASIC5.85□□□□□ -1.47
VPS50Q96JG6 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.85□□□□□ -1.47
VPS50Q96JG6 RNA5SP187-201ENST00000384400 119 ntBASIC5.85□□□□□ -1.47
VPS50Q96JG6 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
VPS50Q96JG6 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC5.85□□□□□ -1.47
VPS50Q96JG6 RN7SKP121-201ENST00000410842 305 ntBASIC5.85□□□□□ -1.47
VPS50Q96JG6 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.85□□□□□ -1.47
VPS50Q96JG6 AL158050.1-201ENST00000416077 457 ntBASIC5.85□□□□□ -1.47
VPS50Q96JG6 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
VPS50Q96JG6 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC5.85□□□□□ -1.47
VPS50Q96JG6 HMGN2P27-201ENST00000427352 270 ntBASIC5.85□□□□□ -1.47
VPS50Q96JG6 PNKDP1-201ENST00000435914 430 ntBASIC5.85□□□□□ -1.47
VPS50Q96JG6 AC110602.1-201ENST00000437414 318 ntBASIC5.85□□□□□ -1.47
VPS50Q96JG6 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC5.85□□□□□ -1.47
VPS50Q96JG6 HMGN1P2-201ENST00000445197 310 ntBASIC5.85□□□□□ -1.47
VPS50Q96JG6 AL590004.3-202ENST00000445883 451 ntBASIC5.85□□□□□ -1.47
VPS50Q96JG6 AL627224.1-201ENST00000448334 444 ntBASIC5.85□□□□□ -1.47
VPS50Q96JG6 RAB28P2-201ENST00000454299 641 ntBASIC5.85□□□□□ -1.47
VPS50Q96JG6 OSTCP1-201ENST00000455507 450 ntBASIC5.85□□□□□ -1.47
VPS50Q96JG6 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC5.85□□□□□ -1.47
VPS50Q96JG6 RARRES2P3-201ENST00000457739 473 ntBASIC5.85□□□□□ -1.47
VPS50Q96JG6 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.85□□□□□ -1.47
VPS50Q96JG6 NDUFA5P5-201ENST00000468361 342 ntBASIC5.85□□□□□ -1.47
VPS50Q96JG6 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC5.85□□□□□ -1.47
VPS50Q96JG6 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.85□□□□□ -1.47
VPS50Q96JG6 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.85□□□□□ -1.47
VPS50Q96JG6 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC5.85□□□□□ -1.47
VPS50Q96JG6 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC5.85□□□□□ -1.47
VPS50Q96JG6 AP003066.2-201ENST00000529375 555 ntBASIC5.85□□□□□ -1.47
VPS50Q96JG6 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
VPS50Q96JG6 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC5.85□□□□□ -1.47
VPS50Q96JG6 AC009712.1-201ENST00000564938 316 ntBASIC5.85□□□□□ -1.47
VPS50Q96JG6 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC5.85□□□□□ -1.47
VPS50Q96JG6 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.85□□□□□ -1.47
VPS50Q96JG6 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.85□□□□□ -1.47
VPS50Q96JG6 AC006363.1-201ENST00000603806 463 ntBASIC5.85□□□□□ -1.47
VPS50Q96JG6 AC015849.2-201ENST00000605738 409 ntBASIC5.85□□□□□ -1.47
VPS50Q96JG6 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC5.85□□□□□ -1.47
VPS50Q96JG6 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.85□□□□□ -1.47
VPS50Q96JG6 AP005229.2-201ENST00000609980 697 ntBASIC5.85□□□□□ -1.47
VPS50Q96JG6 Z95327.3-201ENST00000610385 572 ntBASIC5.85□□□□□ -1.47
VPS50Q96JG6 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
VPS50Q96JG6 AL096712.1-201ENST00000614561 159 ntBASIC5.85□□□□□ -1.47
VPS50Q96JG6 AL133370.2-201ENST00000619934 439 ntBASIC5.85□□□□□ -1.47
VPS50Q96JG6 AC015722.2-201ENST00000622210 551 ntBASIC5.85□□□□□ -1.47
VPS50Q96JG6 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
VPS50Q96JG6 AC090617.9-201ENST00000623751 147 ntBASIC5.85□□□□□ -1.47
VPS50Q96JG6 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.85□□□□□ -1.47
VPS50Q96JG6 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.85□□□□□ -1.47
VPS50Q96JG6 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC5.85□□□□□ -1.47
VPS50Q96JG6 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
VPS50Q96JG6 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
VPS50Q96JG6 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
VPS50Q96JG6 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
VPS50Q96JG6 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
VPS50Q96JG6 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.85□□□□□ -1.47
VPS50Q96JG6 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.85□□□□□ -1.47
VPS50Q96JG6 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
VPS50Q96JG6 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.85□□□□□ -1.47
VPS50Q96JG6 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms