Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.3□□□□□ -1.56
NUDCD3Q8IVD9 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.3□□□□□ -1.56
NUDCD3Q8IVD9 AL845552.1-201ENST00000556820 323 ntBASIC5.3□□□□□ -1.56
NUDCD3Q8IVD9 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.3□□□□□ -1.56
NUDCD3Q8IVD9 RN7SL356P-201ENST00000582228 248 ntBASIC5.3□□□□□ -1.56
NUDCD3Q8IVD9 AC015802.2-201ENST00000589690 189 ntBASIC5.3□□□□□ -1.56
NUDCD3Q8IVD9 AC006272.2-201ENST00000594725 163 ntBASIC5.3□□□□□ -1.56
NUDCD3Q8IVD9 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC5.3□□□□□ -1.56
NUDCD3Q8IVD9 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
NUDCD3Q8IVD9 CASC19-274ENST00000642018 970 ntBASIC5.3□□□□□ -1.56
NUDCD3Q8IVD9 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
NUDCD3Q8IVD9 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.3□□□□□ -1.56
NUDCD3Q8IVD9 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
NUDCD3Q8IVD9 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
NUDCD3Q8IVD9 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.3□□□□□ -1.56
NUDCD3Q8IVD9 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
NUDCD3Q8IVD9 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
NUDCD3Q8IVD9 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
NUDCD3Q8IVD9 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
NUDCD3Q8IVD9 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
NUDCD3Q8IVD9 AL731532.2-201ENST00000623542 1953 ntBASIC5.29□□□□□ -1.56
NUDCD3Q8IVD9 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
NUDCD3Q8IVD9 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
NUDCD3Q8IVD9 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.29□□□□□ -1.56
NUDCD3Q8IVD9 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
NUDCD3Q8IVD9 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
NUDCD3Q8IVD9 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
NUDCD3Q8IVD9 AC113412.1-201ENST00000425840 504 ntBASIC5.29□□□□□ -1.56
NUDCD3Q8IVD9 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.29□□□□□ -1.56
NUDCD3Q8IVD9 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC5.29□□□□□ -1.56
NUDCD3Q8IVD9 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.29□□□□□ -1.56
NUDCD3Q8IVD9 MTND6P5-201ENST00000448266 512 ntBASIC5.29□□□□□ -1.56
NUDCD3Q8IVD9 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.29□□□□□ -1.56
NUDCD3Q8IVD9 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.29□□□□□ -1.56
NUDCD3Q8IVD9 RPL7P41-201ENST00000485823 957 ntBASIC5.29□□□□□ -1.56
NUDCD3Q8IVD9 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.29□□□□□ -1.56
NUDCD3Q8IVD9 RPL9P15-201ENST00000491096 532 ntBASIC5.29□□□□□ -1.56
NUDCD3Q8IVD9 AC114781.3-201ENST00000512083 142 ntBASIC5.29□□□□□ -1.56
NUDCD3Q8IVD9 RNU6-615P-201ENST00000516065 106 ntBASIC5.29□□□□□ -1.56
NUDCD3Q8IVD9 SNORA70.20-201ENST00000516848 126 ntBASIC5.29□□□□□ -1.56
NUDCD3Q8IVD9 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC5.29□□□□□ -1.56
NUDCD3Q8IVD9 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC5.29□□□□□ -1.56
NUDCD3Q8IVD9 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.29□□□□□ -1.56
NUDCD3Q8IVD9 MIR6889-201ENST00000613185 59 ntBASIC5.29□□□□□ -1.56
NUDCD3Q8IVD9 AP001052.1-201ENST00000626421 99 ntBASIC5.29□□□□□ -1.56
NUDCD3Q8IVD9 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
NUDCD3Q8IVD9 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
NUDCD3Q8IVD9 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
NUDCD3Q8IVD9 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
NUDCD3Q8IVD9 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.29□□□□□ -1.56
NUDCD3Q8IVD9 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
NUDCD3Q8IVD9 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
NUDCD3Q8IVD9 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
NUDCD3Q8IVD9 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
NUDCD3Q8IVD9 AC100778.3-201ENST00000580060 1750 ntBASIC5.29□□□□□ -1.56
NUDCD3Q8IVD9 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.29□□□□□ -1.56
NUDCD3Q8IVD9 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
NUDCD3Q8IVD9 CASC19-248ENST00000641674 1356 ntBASIC5.29□□□□□ -1.56
NUDCD3Q8IVD9 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.28□□□□□ -1.56
NUDCD3Q8IVD9 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.28□□□□□ -1.56
NUDCD3Q8IVD9 METTL5-202ENST00000308099 629 ntTSL 3 BASIC5.28□□□□□ -1.56
NUDCD3Q8IVD9 MTHFD2P5-201ENST00000320415 844 ntBASIC5.28□□□□□ -1.56
NUDCD3Q8IVD9 RPS3AP2-201ENST00000407190 754 ntBASIC5.28□□□□□ -1.56
NUDCD3Q8IVD9 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.28□□□□□ -1.56
NUDCD3Q8IVD9 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.28□□□□□ -1.56
NUDCD3Q8IVD9 AC104333.2-201ENST00000422630 192 ntBASIC5.28□□□□□ -1.56
NUDCD3Q8IVD9 PRUNEP1-201ENST00000425846 705 ntBASIC5.28□□□□□ -1.56
NUDCD3Q8IVD9 AC127526.2-201ENST00000426436 775 ntBASIC5.28□□□□□ -1.56
NUDCD3Q8IVD9 AL354893.1-201ENST00000433735 348 ntBASIC5.28□□□□□ -1.56
NUDCD3Q8IVD9 AC046176.1-201ENST00000435260 1170 ntBASIC5.28□□□□□ -1.56
NUDCD3Q8IVD9 AL512637.1-201ENST00000439523 1231 ntBASIC5.28□□□□□ -1.56
NUDCD3Q8IVD9 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.28□□□□□ -1.56
NUDCD3Q8IVD9 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
NUDCD3Q8IVD9 ACA64.1-201ENST00000459171 127 ntBASIC5.28□□□□□ -1.56
NUDCD3Q8IVD9 RPL5P22-201ENST00000480199 884 ntBASIC5.28□□□□□ -1.56
NUDCD3Q8IVD9 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.28□□□□□ -1.56
NUDCD3Q8IVD9 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.28□□□□□ -1.56
NUDCD3Q8IVD9 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.28□□□□□ -1.56
NUDCD3Q8IVD9 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC5.28□□□□□ -1.56
NUDCD3Q8IVD9 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.28□□□□□ -1.56
NUDCD3Q8IVD9 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.28□□□□□ -1.56
NUDCD3Q8IVD9 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC5.28□□□□□ -1.56
NUDCD3Q8IVD9 MRPS21P7-201ENST00000566937 238 ntBASIC5.28□□□□□ -1.56
NUDCD3Q8IVD9 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC5.28□□□□□ -1.56
NUDCD3Q8IVD9 AC002310.3-201ENST00000569728 723 ntBASIC5.28□□□□□ -1.56
NUDCD3Q8IVD9 AC007342.5-201ENST00000571340 2142 ntBASIC5.28□□□□□ -1.56
NUDCD3Q8IVD9 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
NUDCD3Q8IVD9 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
NUDCD3Q8IVD9 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
NUDCD3Q8IVD9 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
NUDCD3Q8IVD9 CASC19-255ENST00000641733 1385 ntBASIC5.28□□□□□ -1.56
NUDCD3Q8IVD9 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
NUDCD3Q8IVD9 LINC01963-201ENST00000562038 3148 ntBASIC5.28□□□□□ -1.56
NUDCD3Q8IVD9 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.27□□□□□ -1.57
NUDCD3Q8IVD9 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
NUDCD3Q8IVD9 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
NUDCD3Q8IVD9 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
NUDCD3Q8IVD9 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
NUDCD3Q8IVD9 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
NUDCD3Q8IVD9 RN7SKP171-201ENST00000364417 303 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms