Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
CRLF3Q8IUI8 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.39□□□□□ -1.55
CRLF3Q8IUI8 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CRLF3Q8IUI8 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CRLF3Q8IUI8 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CRLF3Q8IUI8 RNA5SP394-201ENST00000364216 119 ntBASIC5.39□□□□□ -1.55
CRLF3Q8IUI8 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.39□□□□□ -1.55
CRLF3Q8IUI8 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.39□□□□□ -1.55
CRLF3Q8IUI8 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CRLF3Q8IUI8 RPL12P9-201ENST00000412942 488 ntBASIC5.39□□□□□ -1.55
CRLF3Q8IUI8 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.39□□□□□ -1.55
CRLF3Q8IUI8 HMGB3P24-201ENST00000433260 622 ntBASIC5.39□□□□□ -1.55
CRLF3Q8IUI8 AC090018.1-201ENST00000434369 367 ntBASIC5.39□□□□□ -1.55
CRLF3Q8IUI8 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.39□□□□□ -1.55
CRLF3Q8IUI8 RN7SL583P-201ENST00000475692 287 ntBASIC5.39□□□□□ -1.55
CRLF3Q8IUI8 RPS12P31-201ENST00000491419 398 ntBASIC5.39□□□□□ -1.55
CRLF3Q8IUI8 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CRLF3Q8IUI8 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.39□□□□□ -1.55
CRLF3Q8IUI8 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.39□□□□□ -1.55
CRLF3Q8IUI8 AC016839.1-201ENST00000578162 867 ntBASIC5.39□□□□□ -1.55
CRLF3Q8IUI8 SNORD95-201ENST00000579879 68 ntBASIC5.39□□□□□ -1.55
CRLF3Q8IUI8 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC5.39□□□□□ -1.55
CRLF3Q8IUI8 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.39□□□□□ -1.55
CRLF3Q8IUI8 AC010487.1-201ENST00000594408 1172 ntBASIC5.39□□□□□ -1.55
CRLF3Q8IUI8 MIR6768-201ENST00000610734 72 ntBASIC5.39□□□□□ -1.55
CRLF3Q8IUI8 AC004477.3-201ENST00000614061 590 ntBASIC5.39□□□□□ -1.55
CRLF3Q8IUI8 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
CRLF3Q8IUI8 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
CRLF3Q8IUI8 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
CRLF3Q8IUI8 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CRLF3Q8IUI8 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CRLF3Q8IUI8 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CRLF3Q8IUI8 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
CRLF3Q8IUI8 MTCO1P11-201ENST00000429111 1528 ntBASIC5.38□□□□□ -1.55
CRLF3Q8IUI8 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
CRLF3Q8IUI8 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.38□□□□□ -1.55
CRLF3Q8IUI8 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.38□□□□□ -1.55
CRLF3Q8IUI8 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.38□□□□□ -1.55
CRLF3Q8IUI8 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CRLF3Q8IUI8 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CRLF3Q8IUI8 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.38□□□□□ -1.55
CRLF3Q8IUI8 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CRLF3Q8IUI8 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
CRLF3Q8IUI8 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CRLF3Q8IUI8 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CRLF3Q8IUI8 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.38□□□□□ -1.55
CRLF3Q8IUI8 RNU1-19P-201ENST00000363306 165 ntBASIC5.38□□□□□ -1.55
CRLF3Q8IUI8 AC079355.1-201ENST00000421770 223 ntBASIC5.38□□□□□ -1.55
CRLF3Q8IUI8 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.38□□□□□ -1.55
CRLF3Q8IUI8 REREP1Y-201ENST00000422655 198 ntBASIC5.38□□□□□ -1.55
CRLF3Q8IUI8 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC5.38□□□□□ -1.55
CRLF3Q8IUI8 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.38□□□□□ -1.55
CRLF3Q8IUI8 REREP2Y-201ENST00000439103 200 ntBASIC5.38□□□□□ -1.55
CRLF3Q8IUI8 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.38□□□□□ -1.55
CRLF3Q8IUI8 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.38□□□□□ -1.55
CRLF3Q8IUI8 RPS27AP2-201ENST00000457576 465 ntBASIC5.38□□□□□ -1.55
CRLF3Q8IUI8 RPS23P6-201ENST00000466136 431 ntBASIC5.38□□□□□ -1.55
CRLF3Q8IUI8 RPSAP39-201ENST00000467439 883 ntBASIC5.38□□□□□ -1.55
CRLF3Q8IUI8 RPS17P15-201ENST00000475609 349 ntBASIC5.38□□□□□ -1.55
CRLF3Q8IUI8 AC022215.1-201ENST00000481770 362 ntBASIC5.38□□□□□ -1.55
CRLF3Q8IUI8 AC012123.2-201ENST00000485809 248 ntBASIC5.38□□□□□ -1.55
CRLF3Q8IUI8 AC069304.1-201ENST00000491593 704 ntBASIC5.38□□□□□ -1.55
CRLF3Q8IUI8 AC109481.1-201ENST00000509173 282 ntBASIC5.38□□□□□ -1.55
CRLF3Q8IUI8 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC5.38□□□□□ -1.55
CRLF3Q8IUI8 AC100784.1-201ENST00000522790 310 ntBASIC5.38□□□□□ -1.55
CRLF3Q8IUI8 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.38□□□□□ -1.55
CRLF3Q8IUI8 AC022404.1-201ENST00000555320 273 ntBASIC5.38□□□□□ -1.55
CRLF3Q8IUI8 AC006349.1-201ENST00000555526 235 ntBASIC5.38□□□□□ -1.55
CRLF3Q8IUI8 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.38□□□□□ -1.55
CRLF3Q8IUI8 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.38□□□□□ -1.55
CRLF3Q8IUI8 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.38□□□□□ -1.55
CRLF3Q8IUI8 AC063977.5-201ENST00000601044 974 ntBASIC5.38□□□□□ -1.55
CRLF3Q8IUI8 MIR6886-201ENST00000619864 61 ntBASIC5.38□□□□□ -1.55
CRLF3Q8IUI8 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.38□□□□□ -1.55
CRLF3Q8IUI8 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
CRLF3Q8IUI8 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
CRLF3Q8IUI8 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CRLF3Q8IUI8 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
CRLF3Q8IUI8 AC116158.1-201ENST00000560231 2129 ntBASIC5.38□□□□□ -1.55
CRLF3Q8IUI8 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.38□□□□□ -1.55
CRLF3Q8IUI8 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.38□□□□□ -1.55
CRLF3Q8IUI8 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.37□□□□□ -1.55
CRLF3Q8IUI8 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.37□□□□□ -1.55
CRLF3Q8IUI8 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CRLF3Q8IUI8 AL450345.1-202ENST00000605741 3881 ntBASIC5.37□□□□□ -1.55
CRLF3Q8IUI8 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
CRLF3Q8IUI8 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CRLF3Q8IUI8 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.37□□□□□ -1.55
CRLF3Q8IUI8 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
CRLF3Q8IUI8 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CRLF3Q8IUI8 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CRLF3Q8IUI8 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CRLF3Q8IUI8 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CRLF3Q8IUI8 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
CRLF3Q8IUI8 RN7SKP229-201ENST00000410465 302 ntBASIC5.37□□□□□ -1.55
CRLF3Q8IUI8 OR2AT2P-201ENST00000413438 905 ntBASIC5.37□□□□□ -1.55
CRLF3Q8IUI8 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.37□□□□□ -1.55
CRLF3Q8IUI8 AL513325.1-201ENST00000417716 1034 ntBASIC5.37□□□□□ -1.55
CRLF3Q8IUI8 AC002504.1-201ENST00000438281 691 ntBASIC5.37□□□□□ -1.55
CRLF3Q8IUI8 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms