Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC7.51□□□□□ -1.21
FOXR1Q6PIV2 AC138035.1-203ENST00000604354 1066 ntTSL 2 BASIC7.51□□□□□ -1.21
FOXR1Q6PIV2 AC008385.1-201ENST00000604421 355 ntBASIC7.51□□□□□ -1.21
FOXR1Q6PIV2 AL009028.1-201ENST00000604895 802 ntBASIC7.51□□□□□ -1.21
FOXR1Q6PIV2 PART1_3.1-201ENST00000619680 131 ntBASIC7.51□□□□□ -1.21
FOXR1Q6PIV2 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC7.51□□□□□ -1.21
FOXR1Q6PIV2 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC7.51□□□□□ -1.21
FOXR1Q6PIV2 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC7.51□□□□□ -1.21
FOXR1Q6PIV2 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
FOXR1Q6PIV2 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
FOXR1Q6PIV2 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC7.51□□□□□ -1.21
FOXR1Q6PIV2 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
FOXR1Q6PIV2 UAP1-203ENST00000367925 2069 ntAPPRIS ALT1 TSL 5 BASIC7.51□□□□□ -1.21
FOXR1Q6PIV2 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
FOXR1Q6PIV2 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC7.51□□□□□ -1.21
FOXR1Q6PIV2 HHLA2-201ENST00000357759 2666 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
FOXR1Q6PIV2 EPHA4-201ENST00000281821 6346 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
FOXR1Q6PIV2 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
FOXR1Q6PIV2 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
FOXR1Q6PIV2 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
FOXR1Q6PIV2 DDX24-201ENST00000330836 2738 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
FOXR1Q6PIV2 TRAF6P1-201ENST00000429404 1558 ntBASIC7.5□□□□□ -1.21
FOXR1Q6PIV2 ITPR1-204ENST00000443694 9513 ntAPPRIS ALT1 TSL 1 (best) BASIC7.5□□□□□ -1.21
FOXR1Q6PIV2 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
FOXR1Q6PIV2 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC7.5□□□□□ -1.21
FOXR1Q6PIV2 STK4-202ENST00000372806 6342 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
FOXR1Q6PIV2 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
FOXR1Q6PIV2 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
FOXR1Q6PIV2 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC7.5□□□□□ -1.21
FOXR1Q6PIV2 RNA5SP218-201ENST00000363188 109 ntBASIC7.5□□□□□ -1.21
FOXR1Q6PIV2 RNU6-697P-201ENST00000363348 107 ntBASIC7.5□□□□□ -1.21
FOXR1Q6PIV2 RNU6-254P-201ENST00000363377 107 ntBASIC7.5□□□□□ -1.21
FOXR1Q6PIV2 Y_RNA.142-201ENST00000363491 102 ntBASIC7.5□□□□□ -1.21
FOXR1Q6PIV2 AL450124.1-201ENST00000376401 353 ntBASIC7.5□□□□□ -1.21
FOXR1Q6PIV2 AC093719.1-202ENST00000392735 373 ntBASIC7.5□□□□□ -1.21
FOXR1Q6PIV2 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
FOXR1Q6PIV2 RPL7-203ENST00000396466 762 ntTSL 3 BASIC7.5□□□□□ -1.21
FOXR1Q6PIV2 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
FOXR1Q6PIV2 RN7SKP285-201ENST00000410137 318 ntBASIC7.5□□□□□ -1.21
FOXR1Q6PIV2 AC012451.1-201ENST00000412312 357 ntTSL 3 BASIC7.5□□□□□ -1.21
FOXR1Q6PIV2 NRBF2P2-201ENST00000413087 861 ntBASIC7.5□□□□□ -1.21
FOXR1Q6PIV2 AP001043.1-203ENST00000415824 407 ntTSL 5 BASIC7.5□□□□□ -1.21
FOXR1Q6PIV2 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC7.5□□□□□ -1.21
FOXR1Q6PIV2 AC003071.2-201ENST00000423857 315 ntBASIC7.5□□□□□ -1.21
FOXR1Q6PIV2 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC7.5□□□□□ -1.21
FOXR1Q6PIV2 AL121776.1-201ENST00000429337 372 ntBASIC7.5□□□□□ -1.21
FOXR1Q6PIV2 IGLV3-4-201ENST00000432300 244 ntBASIC7.5□□□□□ -1.21
FOXR1Q6PIV2 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC7.5□□□□□ -1.21
FOXR1Q6PIV2 IGKV6D-21-201ENST00000436451 409 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
FOXR1Q6PIV2 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC7.5□□□□□ -1.21
FOXR1Q6PIV2 TRAPPC2P8-201ENST00000440676 396 ntBASIC7.5□□□□□ -1.21
FOXR1Q6PIV2 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC7.5□□□□□ -1.21
FOXR1Q6PIV2 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC7.5□□□□□ -1.21
FOXR1Q6PIV2 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC7.5□□□□□ -1.21
FOXR1Q6PIV2 MED28P8-201ENST00000454831 521 ntBASIC7.5□□□□□ -1.21
FOXR1Q6PIV2 AC010878.1-201ENST00000456500 1047 ntBASIC7.5□□□□□ -1.21
FOXR1Q6PIV2 PNPLA4P1-201ENST00000458328 305 ntBASIC7.5□□□□□ -1.21
FOXR1Q6PIV2 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC7.5□□□□□ -1.21
FOXR1Q6PIV2 AC007537.2-201ENST00000472093 511 ntBASIC7.5□□□□□ -1.21
FOXR1Q6PIV2 GLYCTK-AS1-203ENST00000493616 445 ntTSL 3 BASIC7.5□□□□□ -1.21
FOXR1Q6PIV2 RNA5SP96-201ENST00000516041 107 ntBASIC7.5□□□□□ -1.21
FOXR1Q6PIV2 VPS37A-208ENST00000521005 479 ntTSL 3 BASIC7.5□□□□□ -1.21
FOXR1Q6PIV2 FOLH1B-202ENST00000529567 2145 ntBASIC7.5□□□□□ -1.21
FOXR1Q6PIV2 AL358334.3-201ENST00000557343 535 ntTSL 3 BASIC7.5□□□□□ -1.21
FOXR1Q6PIV2 AC044860.3-201ENST00000559957 368 ntBASIC7.5□□□□□ -1.21
FOXR1Q6PIV2 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC7.5□□□□□ -1.21
FOXR1Q6PIV2 AC034268.2-201ENST00000571784 482 ntBASIC7.5□□□□□ -1.21
FOXR1Q6PIV2 AC007151.1-201ENST00000572774 483 ntBASIC7.5□□□□□ -1.21
FOXR1Q6PIV2 AC091178.1-204ENST00000577328 366 ntTSL 4 BASIC7.5□□□□□ -1.21
FOXR1Q6PIV2 MIR3137-201ENST00000577367 75 ntBASIC7.5□□□□□ -1.21
FOXR1Q6PIV2 AC005410.2-201ENST00000580270 463 ntTSL 3 BASIC7.5□□□□□ -1.21
FOXR1Q6PIV2 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC7.5□□□□□ -1.21
FOXR1Q6PIV2 VN1R79P-201ENST00000593540 513 ntBASIC7.5□□□□□ -1.21
FOXR1Q6PIV2 OR7E94P-202ENST00000601375 790 ntBASIC7.5□□□□□ -1.21
FOXR1Q6PIV2 AC012488.1-201ENST00000611221 640 ntBASIC7.5□□□□□ -1.21
FOXR1Q6PIV2 FAM27E3-202ENST00000614611 340 ntBASIC7.5□□□□□ -1.21
FOXR1Q6PIV2 MIR6883-201ENST00000614952 78 ntBASIC7.5□□□□□ -1.21
FOXR1Q6PIV2 AL713922.2-201ENST00000619384 716 ntBASIC7.5□□□□□ -1.21
FOXR1Q6PIV2 SPINK6-203ENST00000621437 605 ntAPPRIS P1 TSL 3 BASIC7.5□□□□□ -1.21
FOXR1Q6PIV2 AC245033.2-201ENST00000621893 421 ntTSL 3 BASIC7.5□□□□□ -1.21
FOXR1Q6PIV2 AL160413.1-201ENST00000622780 310 ntBASIC7.5□□□□□ -1.21
FOXR1Q6PIV2 ASB8-218ENST00000629941 278 ntTSL 5 BASIC7.5□□□□□ -1.21
FOXR1Q6PIV2 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC7.5□□□□□ -1.21
FOXR1Q6PIV2 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC7.5□□□□□ -1.21
FOXR1Q6PIV2 MTCO1P23-201ENST00000415223 1526 ntBASIC7.5□□□□□ -1.21
FOXR1Q6PIV2 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
FOXR1Q6PIV2 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC7.5□□□□□ -1.21
FOXR1Q6PIV2 SORBS1-209ENST00000371245 2779 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
FOXR1Q6PIV2 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC7.5□□□□□ -1.21
FOXR1Q6PIV2 AC093225.1-201ENST00000506867 1408 ntBASIC7.5□□□□□ -1.21
FOXR1Q6PIV2 AC027279.1-201ENST00000568885 4284 ntBASIC7.5□□□□□ -1.21
FOXR1Q6PIV2 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
FOXR1Q6PIV2 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
FOXR1Q6PIV2 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC7.5□□□□□ -1.21
FOXR1Q6PIV2 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
FOXR1Q6PIV2 MS4A6A-208ENST00000528851 1806 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
FOXR1Q6PIV2 SLC9B1P1-201ENST00000331172 1337 ntBASIC7.5□□□□□ -1.21
FOXR1Q6PIV2 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC7.5□□□□□ -1.21
FOXR1Q6PIV2 ABRAXAS2-201ENST00000298492 2992 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
FOXR1Q6PIV2 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms