Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 AC244107.2-201ENST00000611773 76 ntBASIC5.43□□□□□ -1.54
AP1S1P61966 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.43□□□□□ -1.54
AP1S1P61966 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC5.43□□□□□ -1.54
AP1S1P61966 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.43□□□□□ -1.54
AP1S1P61966 AC136428.4-201ENST00000634254 1155 ntBASIC5.43□□□□□ -1.54
AP1S1P61966 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
AP1S1P61966 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
AP1S1P61966 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
AP1S1P61966 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
AP1S1P61966 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.43□□□□□ -1.54
AP1S1P61966 MRRFP1-201ENST00000435941 1675 ntBASIC5.43□□□□□ -1.54
AP1S1P61966 AC004158.1-201ENST00000564508 4319 ntBASIC5.43□□□□□ -1.54
AP1S1P61966 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
AP1S1P61966 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
AP1S1P61966 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.43□□□□□ -1.54
AP1S1P61966 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
AP1S1P61966 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
AP1S1P61966 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.42□□□□□ -1.54
AP1S1P61966 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
AP1S1P61966 SAMM50P1-201ENST00000455403 1399 ntBASIC5.42□□□□□ -1.54
AP1S1P61966 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
AP1S1P61966 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.42□□□□□ -1.54
AP1S1P61966 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
AP1S1P61966 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.42□□□□□ -1.54
AP1S1P61966 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
AP1S1P61966 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
AP1S1P61966 HSPA8P15-201ENST00000401676 786 ntBASIC5.42□□□□□ -1.54
AP1S1P61966 RN7SKP229-201ENST00000410465 302 ntBASIC5.42□□□□□ -1.54
AP1S1P61966 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.42□□□□□ -1.54
AP1S1P61966 RPL7L1P9-201ENST00000431298 745 ntBASIC5.42□□□□□ -1.54
AP1S1P61966 RPS26P41-201ENST00000450370 284 ntBASIC5.42□□□□□ -1.54
AP1S1P61966 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
AP1S1P61966 AC079168.1-201ENST00000458741 345 ntBASIC5.42□□□□□ -1.54
AP1S1P61966 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.42□□□□□ -1.54
AP1S1P61966 COPS8P2-201ENST00000473228 627 ntBASIC5.42□□□□□ -1.54
AP1S1P61966 RN7SL423P-201ENST00000486202 304 ntBASIC5.42□□□□□ -1.54
AP1S1P61966 RPS24P16-201ENST00000497294 392 ntBASIC5.42□□□□□ -1.54
AP1S1P61966 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.42□□□□□ -1.54
AP1S1P61966 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.42□□□□□ -1.54
AP1S1P61966 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC5.42□□□□□ -1.54
AP1S1P61966 YWHABP2-201ENST00000540201 713 ntBASIC5.42□□□□□ -1.54
AP1S1P61966 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.42□□□□□ -1.54
AP1S1P61966 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.42□□□□□ -1.54
AP1S1P61966 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.42□□□□□ -1.54
AP1S1P61966 MIR6826-201ENST00000617808 98 ntBASIC5.42□□□□□ -1.54
AP1S1P61966 AP003400.3-201ENST00000624904 346 ntBASIC5.42□□□□□ -1.54
AP1S1P61966 AC099654.11-201ENST00000638857 294 ntBASIC5.42□□□□□ -1.54
AP1S1P61966 Z83820.1-201ENST00000456978 1499 ntBASIC5.42□□□□□ -1.54
AP1S1P61966 AL137058.3-201ENST00000624531 3099 ntBASIC5.42□□□□□ -1.54
AP1S1P61966 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
AP1S1P61966 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
AP1S1P61966 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
AP1S1P61966 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
AP1S1P61966 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
AP1S1P61966 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.42□□□□□ -1.54
AP1S1P61966 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.42□□□□□ -1.54
AP1S1P61966 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
AP1S1P61966 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
AP1S1P61966 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.41□□□□□ -1.54
AP1S1P61966 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
AP1S1P61966 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
AP1S1P61966 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
AP1S1P61966 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
AP1S1P61966 SNORA67-201ENST00000384423 137 ntBASIC5.41□□□□□ -1.54
AP1S1P61966 RNU1-149P-201ENST00000390870 161 ntBASIC5.41□□□□□ -1.54
AP1S1P61966 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
AP1S1P61966 MIR1286-201ENST00000408112 78 ntBASIC5.41□□□□□ -1.54
AP1S1P61966 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.41□□□□□ -1.54
AP1S1P61966 AC093655.2-201ENST00000425735 631 ntBASIC5.41□□□□□ -1.54
AP1S1P61966 AC009784.1-201ENST00000426484 460 ntBASIC5.41□□□□□ -1.54
AP1S1P61966 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC5.41□□□□□ -1.54
AP1S1P61966 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.41□□□□□ -1.54
AP1S1P61966 RPL7P6-201ENST00000480903 738 ntBASIC5.41□□□□□ -1.54
AP1S1P61966 RPL7P40-201ENST00000481703 745 ntBASIC5.41□□□□□ -1.54
AP1S1P61966 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.41□□□□□ -1.54
AP1S1P61966 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.41□□□□□ -1.54
AP1S1P61966 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
AP1S1P61966 OR4A43P-201ENST00000532938 908 ntBASIC5.41□□□□□ -1.54
AP1S1P61966 RPL10P14-201ENST00000565265 298 ntBASIC5.41□□□□□ -1.54
AP1S1P61966 AC019322.1-201ENST00000571869 389 ntBASIC5.41□□□□□ -1.54
AP1S1P61966 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.41□□□□□ -1.54
AP1S1P61966 AC108738.1-201ENST00000603703 237 ntBASIC5.41□□□□□ -1.54
AP1S1P61966 AC006363.1-201ENST00000603806 463 ntBASIC5.41□□□□□ -1.54
AP1S1P61966 AC005252.1-201ENST00000604518 1063 ntBASIC5.41□□□□□ -1.54
AP1S1P61966 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.41□□□□□ -1.54
AP1S1P61966 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.41□□□□□ -1.54
AP1S1P61966 AC010632.3-201ENST00000611377 369 ntBASIC5.41□□□□□ -1.54
AP1S1P61966 AC008115.4-201ENST00000619780 775 ntBASIC5.41□□□□□ -1.54
AP1S1P61966 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.41□□□□□ -1.54
AP1S1P61966 CGA-206ENST00000630630 832 ntTSL 2 BASIC5.41□□□□□ -1.54
AP1S1P61966 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
AP1S1P61966 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
AP1S1P61966 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
AP1S1P61966 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
AP1S1P61966 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
AP1S1P61966 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.41□□□□□ -1.54
AP1S1P61966 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.41□□□□□ -1.54
AP1S1P61966 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
AP1S1P61966 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
AP1S1P61966 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms