Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.6□□□□□ -1.67
AP3S2P59780 AC109464.1-201ENST00000511091 819 ntBASIC4.6□□□□□ -1.67
AP3S2P59780 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC4.6□□□□□ -1.67
AP3S2P59780 RN7SKP34-201ENST00000516142 244 ntBASIC4.6□□□□□ -1.67
AP3S2P59780 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC4.6□□□□□ -1.67
AP3S2P59780 AC090022.1-201ENST00000546569 311 ntBASIC4.6□□□□□ -1.67
AP3S2P59780 OR11H3P-201ENST00000554547 982 ntBASIC4.6□□□□□ -1.67
AP3S2P59780 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC4.6□□□□□ -1.67
AP3S2P59780 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC4.6□□□□□ -1.67
AP3S2P59780 AP005119.1-201ENST00000580956 292 ntBASIC4.6□□□□□ -1.67
AP3S2P59780 AC133552.5-201ENST00000604266 540 ntBASIC4.6□□□□□ -1.67
AP3S2P59780 AC018695.5-201ENST00000605872 315 ntBASIC4.6□□□□□ -1.67
AP3S2P59780 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
AP3S2P59780 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC4.6□□□□□ -1.67
AP3S2P59780 AC135068.5-201ENST00000624197 983 ntBASIC4.6□□□□□ -1.67
AP3S2P59780 AP003400.3-201ENST00000624904 346 ntBASIC4.6□□□□□ -1.67
AP3S2P59780 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
AP3S2P59780 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC4.6□□□□□ -1.67
AP3S2P59780 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.6□□□□□ -1.67
AP3S2P59780 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC4.6□□□□□ -1.67
AP3S2P59780 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
AP3S2P59780 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.6□□□□□ -1.67
AP3S2P59780 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
AP3S2P59780 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
AP3S2P59780 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.59□□□□□ -1.67
AP3S2P59780 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
AP3S2P59780 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
AP3S2P59780 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
AP3S2P59780 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
AP3S2P59780 DDX18P3-201ENST00000404856 2007 ntBASIC4.59□□□□□ -1.67
AP3S2P59780 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.59□□□□□ -1.67
AP3S2P59780 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC4.59□□□□□ -1.67
AP3S2P59780 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.59□□□□□ -1.67
AP3S2P59780 AK4P4-201ENST00000419465 646 ntBASIC4.59□□□□□ -1.67
AP3S2P59780 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC4.59□□□□□ -1.67
AP3S2P59780 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC4.59□□□□□ -1.67
AP3S2P59780 AL138479.1-201ENST00000426913 484 ntBASIC4.59□□□□□ -1.67
AP3S2P59780 AC126120.1-201ENST00000431082 470 ntBASIC4.59□□□□□ -1.67
AP3S2P59780 AL353662.1-201ENST00000439099 327 ntBASIC4.59□□□□□ -1.67
AP3S2P59780 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.59□□□□□ -1.67
AP3S2P59780 H3F3AP5-201ENST00000475267 429 ntBASIC4.59□□□□□ -1.67
AP3S2P59780 RN7SL502P-201ENST00000481857 290 ntBASIC4.59□□□□□ -1.67
AP3S2P59780 BTG4P1-201ENST00000510421 183 ntBASIC4.59□□□□□ -1.67
AP3S2P59780 SCARNA6.1-201ENST00000516989 238 ntBASIC4.59□□□□□ -1.67
AP3S2P59780 LRP4-AS1-202ENST00000531719 731 ntTSL 4 BASIC4.59□□□□□ -1.67
AP3S2P59780 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC4.59□□□□□ -1.67
AP3S2P59780 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC4.59□□□□□ -1.67
AP3S2P59780 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
AP3S2P59780 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.59□□□□□ -1.67
AP3S2P59780 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC4.59□□□□□ -1.67
AP3S2P59780 RN7SL32P-201ENST00000580514 281 ntBASIC4.59□□□□□ -1.67
AP3S2P59780 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.59□□□□□ -1.67
AP3S2P59780 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC4.59□□□□□ -1.67
AP3S2P59780 MIR4701-201ENST00000583094 63 ntBASIC4.59□□□□□ -1.67
AP3S2P59780 AC023421.1-201ENST00000590535 1785 ntBASIC4.59□□□□□ -1.67
AP3S2P59780 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC4.59□□□□□ -1.67
AP3S2P59780 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC4.59□□□□□ -1.67
AP3S2P59780 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC4.59□□□□□ -1.67
AP3S2P59780 MIR6731-201ENST00000614863 72 ntBASIC4.59□□□□□ -1.67
AP3S2P59780 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC4.59□□□□□ -1.67
AP3S2P59780 AC131238.1-201ENST00000617135 328 ntBASIC4.59□□□□□ -1.67
AP3S2P59780 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.59□□□□□ -1.67
AP3S2P59780 AC083843.3-201ENST00000623679 2186 ntBASIC4.59□□□□□ -1.67
AP3S2P59780 AP002967.1-201ENST00000624203 539 ntBASIC4.59□□□□□ -1.67
AP3S2P59780 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.59□□□□□ -1.67
AP3S2P59780 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.59□□□□□ -1.67
AP3S2P59780 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
AP3S2P59780 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
AP3S2P59780 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
AP3S2P59780 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.58□□□□□ -1.68
AP3S2P59780 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
AP3S2P59780 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.58□□□□□ -1.68
AP3S2P59780 AL450326.2-201ENST00000421913 1962 ntBASIC4.58□□□□□ -1.68
AP3S2P59780 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
AP3S2P59780 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
AP3S2P59780 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.58□□□□□ -1.68
AP3S2P59780 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC4.58□□□□□ -1.68
AP3S2P59780 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC4.58□□□□□ -1.68
AP3S2P59780 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
AP3S2P59780 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
AP3S2P59780 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
AP3S2P59780 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
AP3S2P59780 AL512430.2-201ENST00000406786 339 ntBASIC4.58□□□□□ -1.68
AP3S2P59780 MARK2P12-201ENST00000420129 585 ntBASIC4.58□□□□□ -1.68
AP3S2P59780 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC4.58□□□□□ -1.68
AP3S2P59780 RPL7AP51-201ENST00000422016 760 ntBASIC4.58□□□□□ -1.68
AP3S2P59780 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
AP3S2P59780 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC4.58□□□□□ -1.68
AP3S2P59780 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.58□□□□□ -1.68
AP3S2P59780 AL031681.1-201ENST00000443304 400 ntBASIC4.58□□□□□ -1.68
AP3S2P59780 AC097463.1-201ENST00000447288 481 ntBASIC4.58□□□□□ -1.68
AP3S2P59780 BX842559.2-201ENST00000451418 605 ntBASIC4.58□□□□□ -1.68
AP3S2P59780 HSPE1P22-201ENST00000456856 327 ntBASIC4.58□□□□□ -1.68
AP3S2P59780 AL122020.1-201ENST00000472287 459 ntBASIC4.58□□□□□ -1.68
AP3S2P59780 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
AP3S2P59780 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC4.58□□□□□ -1.68
AP3S2P59780 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC4.58□□□□□ -1.68
AP3S2P59780 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.58□□□□□ -1.68
AP3S2P59780 OR8G3P-201ENST00000533406 921 ntBASIC4.58□□□□□ -1.68
AP3S2P59780 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms