Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 RNGTTP1-201ENST00000420965 728 ntBASIC5.57□□□□□ -1.52
CLCNKAP51800 MTND4LP7-201ENST00000431728 294 ntBASIC5.57□□□□□ -1.52
CLCNKAP51800 AL392003.1-201ENST00000434394 243 ntBASIC5.57□□□□□ -1.52
CLCNKAP51800 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.57□□□□□ -1.52
CLCNKAP51800 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CLCNKAP51800 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
CLCNKAP51800 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC5.57□□□□□ -1.52
CLCNKAP51800 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.57□□□□□ -1.52
CLCNKAP51800 LDHBP2-201ENST00000456969 1005 ntBASIC5.57□□□□□ -1.52
CLCNKAP51800 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.57□□□□□ -1.52
CLCNKAP51800 RN7SL466P-201ENST00000497546 295 ntBASIC5.57□□□□□ -1.52
CLCNKAP51800 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.57□□□□□ -1.52
CLCNKAP51800 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC5.57□□□□□ -1.52
CLCNKAP51800 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.57□□□□□ -1.52
CLCNKAP51800 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.57□□□□□ -1.52
CLCNKAP51800 AL136520.1-202ENST00000555494 763 ntBASIC5.57□□□□□ -1.52
CLCNKAP51800 AC122134.1-202ENST00000569111 1201 ntBASIC5.57□□□□□ -1.52
CLCNKAP51800 SNORD95-201ENST00000579879 68 ntBASIC5.57□□□□□ -1.52
CLCNKAP51800 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC5.57□□□□□ -1.52
CLCNKAP51800 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.57□□□□□ -1.52
CLCNKAP51800 AL589674.2-201ENST00000604304 337 ntBASIC5.57□□□□□ -1.52
CLCNKAP51800 AC016542.1-201ENST00000608259 493 ntBASIC5.57□□□□□ -1.52
CLCNKAP51800 AL512506.1-201ENST00000613918 449 ntBASIC5.57□□□□□ -1.52
CLCNKAP51800 AC008115.3-201ENST00000614874 549 ntBASIC5.57□□□□□ -1.52
CLCNKAP51800 AL590410.1-201ENST00000617925 333 ntBASIC5.57□□□□□ -1.52
CLCNKAP51800 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.57□□□□□ -1.52
CLCNKAP51800 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
CLCNKAP51800 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
CLCNKAP51800 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.57□□□□□ -1.52
CLCNKAP51800 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.57□□□□□ -1.52
CLCNKAP51800 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CLCNKAP51800 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CLCNKAP51800 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
CLCNKAP51800 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.57□□□□□ -1.52
CLCNKAP51800 AL158152.1-201ENST00000602652 1435 ntBASIC5.57□□□□□ -1.52
CLCNKAP51800 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
CLCNKAP51800 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CLCNKAP51800 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.56□□□□□ -1.52
CLCNKAP51800 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
CLCNKAP51800 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CLCNKAP51800 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.56□□□□□ -1.52
CLCNKAP51800 UGT2B24P-201ENST00000514441 1597 ntBASIC5.56□□□□□ -1.52
CLCNKAP51800 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CLCNKAP51800 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CLCNKAP51800 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
CLCNKAP51800 AC125336.1-201ENST00000508893 2827 ntBASIC5.56□□□□□ -1.52
CLCNKAP51800 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CLCNKAP51800 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CLCNKAP51800 RNA5SP132-201ENST00000364725 118 ntBASIC5.56□□□□□ -1.52
CLCNKAP51800 UBE2V1P15-201ENST00000407776 448 ntBASIC5.56□□□□□ -1.52
CLCNKAP51800 SNORA79B-201ENST00000410557 148 ntBASIC5.56□□□□□ -1.52
CLCNKAP51800 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.56□□□□□ -1.52
CLCNKAP51800 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC5.56□□□□□ -1.52
CLCNKAP51800 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.56□□□□□ -1.52
CLCNKAP51800 AC016687.1-201ENST00000482574 353 ntBASIC5.56□□□□□ -1.52
CLCNKAP51800 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.56□□□□□ -1.52
CLCNKAP51800 PDCL3P4-201ENST00000489621 720 ntBASIC5.56□□□□□ -1.52
CLCNKAP51800 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC5.56□□□□□ -1.52
CLCNKAP51800 SNORA70.11-201ENST00000515987 138 ntBASIC5.56□□□□□ -1.52
CLCNKAP51800 SNORA70.13-201ENST00000516116 138 ntBASIC5.56□□□□□ -1.52
CLCNKAP51800 SNORA26.10-201ENST00000516427 141 ntBASIC5.56□□□□□ -1.52
CLCNKAP51800 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC5.56□□□□□ -1.52
CLCNKAP51800 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.56□□□□□ -1.52
CLCNKAP51800 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.56□□□□□ -1.52
CLCNKAP51800 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
CLCNKAP51800 HSPE1P2-201ENST00000554777 306 ntBASIC5.56□□□□□ -1.52
CLCNKAP51800 AGGF1P7-201ENST00000562369 913 ntBASIC5.56□□□□□ -1.52
CLCNKAP51800 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.56□□□□□ -1.52
CLCNKAP51800 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC5.56□□□□□ -1.52
CLCNKAP51800 MTND4LP25-201ENST00000570218 163 ntBASIC5.56□□□□□ -1.52
CLCNKAP51800 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
CLCNKAP51800 MIR1273E-201ENST00000581165 102 ntBASIC5.56□□□□□ -1.52
CLCNKAP51800 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.56□□□□□ -1.52
CLCNKAP51800 AC004477.3-201ENST00000614061 590 ntBASIC5.56□□□□□ -1.52
CLCNKAP51800 MIR6729-201ENST00000618194 65 ntBASIC5.56□□□□□ -1.52
CLCNKAP51800 AC026367.3-201ENST00000619032 590 ntBASIC5.56□□□□□ -1.52
CLCNKAP51800 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CLCNKAP51800 AL356490.1-201ENST00000623079 479 ntBASIC5.56□□□□□ -1.52
CLCNKAP51800 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
CLCNKAP51800 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
CLCNKAP51800 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CLCNKAP51800 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CLCNKAP51800 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
CLCNKAP51800 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.56□□□□□ -1.52
CLCNKAP51800 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.56□□□□□ -1.52
CLCNKAP51800 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.56□□□□□ -1.52
CLCNKAP51800 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CLCNKAP51800 AC114786.1-201ENST00000512892 1415 ntBASIC5.56□□□□□ -1.52
CLCNKAP51800 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.56□□□□□ -1.52
CLCNKAP51800 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.56□□□□□ -1.52
CLCNKAP51800 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
CLCNKAP51800 AC018809.2-201ENST00000602436 3823 ntBASIC5.55□□□□□ -1.52
CLCNKAP51800 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.55□□□□□ -1.52
CLCNKAP51800 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CLCNKAP51800 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.55□□□□□ -1.52
CLCNKAP51800 MTCO1P15-201ENST00000529569 1526 ntBASIC5.55□□□□□ -1.52
CLCNKAP51800 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.55□□□□□ -1.52
CLCNKAP51800 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CLCNKAP51800 PEX12P1-201ENST00000400284 1048 ntBASIC5.55□□□□□ -1.52
CLCNKAP51800 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms