Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
BRCA2P51587 RRP8-201ENST00000254605 6560 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
BRCA2P51587 AKAP13-201ENST00000361243 9468 ntAPPRIS P4 TSL 1 (best) BASIC5.54□□□□□ -1.52
BRCA2P51587 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.54□□□□□ -1.52
BRCA2P51587 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
BRCA2P51587 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
BRCA2P51587 RNU6-525P-201ENST00000363685 104 ntBASIC5.54□□□□□ -1.52
BRCA2P51587 SNORD8-201ENST00000363915 110 ntBASIC5.54□□□□□ -1.52
BRCA2P51587 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
BRCA2P51587 SNORA70C-201ENST00000384538 135 ntBASIC5.54□□□□□ -1.52
BRCA2P51587 RPL34P6-201ENST00000432390 345 ntBASIC5.54□□□□□ -1.52
BRCA2P51587 CT45A11P-201ENST00000448043 1134 ntBASIC5.54□□□□□ -1.52
BRCA2P51587 RPL7P19-201ENST00000469948 618 ntBASIC5.54□□□□□ -1.52
BRCA2P51587 AC106806.2-201ENST00000509365 500 ntBASIC5.54□□□□□ -1.52
BRCA2P51587 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
BRCA2P51587 C18orf32-203ENST00000613385 5395 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
BRCA2P51587 RAD17P2-201ENST00000451754 1977 ntBASIC5.53□□□□□ -1.52
BRCA2P51587 PDE4B-206ENST00000423207 4546 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
BRCA2P51587 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
BRCA2P51587 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
BRCA2P51587 ROBO2-201ENST00000332191 5437 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
BRCA2P51587 ATP5G3-201ENST00000284727 5484 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
BRCA2P51587 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC5.53□□□□□ -1.52
BRCA2P51587 AL731566.1-201ENST00000620490 1937 ntBASIC5.53□□□□□ -1.52
BRCA2P51587 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
BRCA2P51587 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
BRCA2P51587 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
BRCA2P51587 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
BRCA2P51587 SNORD56.6-201ENST00000384569 71 ntBASIC5.53□□□□□ -1.52
BRCA2P51587 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
BRCA2P51587 AL353626.3-201ENST00000413399 657 ntBASIC5.53□□□□□ -1.52
BRCA2P51587 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
BRCA2P51587 RPS3AP54-201ENST00000435535 734 ntBASIC5.53□□□□□ -1.52
BRCA2P51587 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC5.53□□□□□ -1.52
BRCA2P51587 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC5.53□□□□□ -1.52
BRCA2P51587 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.53□□□□□ -1.52
BRCA2P51587 AP000843.1-201ENST00000624880 701 ntBASIC5.53□□□□□ -1.52
BRCA2P51587 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.53□□□□□ -1.52
BRCA2P51587 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
BRCA2P51587 KIAA1671-206ENST00000637069 6510 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
BRCA2P51587 SPTBN1-201ENST00000333896 9075 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
BRCA2P51587 ATP2B2-201ENST00000352432 8593 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
BRCA2P51587 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
BRCA2P51587 SOGA3-207ENST00000481848 11464 ntAPPRIS P5 TSL 5 BASIC5.53□□□□□ -1.52
BRCA2P51587 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
BRCA2P51587 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
BRCA2P51587 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
BRCA2P51587 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
BRCA2P51587 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
BRCA2P51587 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC5.53□□□□□ -1.52
BRCA2P51587 SNORA31.9-201ENST00000516429 84 ntBASIC5.53□□□□□ -1.52
BRCA2P51587 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.53□□□□□ -1.52
BRCA2P51587 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
BRCA2P51587 MIR3124-201ENST00000582636 67 ntBASIC5.53□□□□□ -1.52
BRCA2P51587 MIR3138-201ENST00000585238 82 ntBASIC5.53□□□□□ -1.52
BRCA2P51587 CEP350-202ENST00000367607 13491 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
BRCA2P51587 UTY-203ENST00000362096 4990 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
BRCA2P51587 HMGB1-203ENST00000341423 5485 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
BRCA2P51587 SDAD1P1-202ENST00000524156 2051 ntBASIC5.53□□□□□ -1.52
BRCA2P51587 ERG-205ENST00000398910 4954 ntTSL 5 BASIC5.53□□□□□ -1.52
BRCA2P51587 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
BRCA2P51587 SCUBE3-201ENST00000274938 7356 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
BRCA2P51587 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC5.53□□□□□ -1.52
BRCA2P51587 RCC2P2-201ENST00000422174 918 ntBASIC5.52□□□□□ -1.53
BRCA2P51587 RPL34P27-201ENST00000428810 349 ntBASIC5.52□□□□□ -1.53
BRCA2P51587 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC5.52□□□□□ -1.53
BRCA2P51587 AL353729.2-201ENST00000605859 1249 ntBASIC5.52□□□□□ -1.53
BRCA2P51587 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC5.52□□□□□ -1.53
BRCA2P51587 SCAF11-202ENST00000369367 7543 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
BRCA2P51587 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.52□□□□□ -1.53
BRCA2P51587 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
BRCA2P51587 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
BRCA2P51587 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
BRCA2P51587 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
BRCA2P51587 AC124944.2-201ENST00000429866 1242 ntBASIC5.52□□□□□ -1.53
BRCA2P51587 FTH1P10-202ENST00000430907 550 ntBASIC5.52□□□□□ -1.53
BRCA2P51587 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.52□□□□□ -1.53
BRCA2P51587 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.52□□□□□ -1.53
BRCA2P51587 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC5.52□□□□□ -1.53
BRCA2P51587 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC5.52□□□□□ -1.53
BRCA2P51587 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC5.52□□□□□ -1.53
BRCA2P51587 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
BRCA2P51587 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
BRCA2P51587 ARHGEF7-203ENST00000375723 4957 ntTSL 5 BASIC5.52□□□□□ -1.53
BRCA2P51587 PCDH9-202ENST00000377865 5709 ntAPPRIS P4 TSL 1 (best) BASIC5.52□□□□□ -1.53
BRCA2P51587 ZBTB40-204ENST00000404138 8992 ntAPPRIS P3 TSL 5 BASIC5.52□□□□□ -1.53
BRCA2P51587 NIPA1-202ENST00000437912 7613 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
BRCA2P51587 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
BRCA2P51587 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
BRCA2P51587 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
BRCA2P51587 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
BRCA2P51587 AC090220.1-201ENST00000593078 1699 ntBASIC5.52□□□□□ -1.53
BRCA2P51587 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
BRCA2P51587 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
BRCA2P51587 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
BRCA2P51587 SNORA11.1-201ENST00000408133 129 ntBASIC5.52□□□□□ -1.53
BRCA2P51587 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC5.52□□□□□ -1.53
BRCA2P51587 AC097523.2-201ENST00000435551 652 ntBASIC5.52□□□□□ -1.53
BRCA2P51587 SLC25A51P1-201ENST00000468432 871 ntBASIC5.52□□□□□ -1.53
BRCA2P51587 NPM1P6-201ENST00000521088 871 ntBASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms