Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RFC1P35251 AC018809.2-201ENST00000602436 3823 ntBASIC5.91□□□□□ -1.46
RFC1P35251 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
RFC1P35251 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RFC1P35251 OR4F13P-202ENST00000560066 2054 ntBASIC5.9□□□□□ -1.46
RFC1P35251 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
RFC1P35251 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
RFC1P35251 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.9□□□□□ -1.46
RFC1P35251 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
RFC1P35251 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.46
RFC1P35251 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.9□□□□□ -1.46
RFC1P35251 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
RFC1P35251 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.9□□□□□ -1.46
RFC1P35251 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.9□□□□□ -1.46
RFC1P35251 AC133552.1-201ENST00000569988 4007 ntBASIC5.9□□□□□ -1.46
RFC1P35251 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
RFC1P35251 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
RFC1P35251 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.9□□□□□ -1.46
RFC1P35251 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
RFC1P35251 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.9□□□□□ -1.46
RFC1P35251 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.9□□□□□ -1.46
RFC1P35251 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.9□□□□□ -1.46
RFC1P35251 HSFY1P1-201ENST00000423928 1178 ntBASIC5.9□□□□□ -1.46
RFC1P35251 AL445528.1-201ENST00000426330 420 ntBASIC5.9□□□□□ -1.46
RFC1P35251 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.9□□□□□ -1.46
RFC1P35251 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC5.9□□□□□ -1.46
RFC1P35251 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.9□□□□□ -1.46
RFC1P35251 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC5.9□□□□□ -1.46
RFC1P35251 RPS10P18-201ENST00000442662 495 ntBASIC5.9□□□□□ -1.46
RFC1P35251 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.9□□□□□ -1.46
RFC1P35251 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC5.9□□□□□ -1.46
RFC1P35251 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
RFC1P35251 AL596266.1-201ENST00000448132 400 ntBASIC5.9□□□□□ -1.46
RFC1P35251 AL445665.1-202ENST00000452436 324 ntBASIC5.9□□□□□ -1.46
RFC1P35251 AC090602.1-201ENST00000469695 252 ntBASIC5.9□□□□□ -1.46
RFC1P35251 AC087672.1-201ENST00000479876 766 ntBASIC5.9□□□□□ -1.46
RFC1P35251 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC5.9□□□□□ -1.46
RFC1P35251 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.9□□□□□ -1.46
RFC1P35251 GLUD1P3-202ENST00000508551 200 ntBASIC5.9□□□□□ -1.46
RFC1P35251 AC106806.2-201ENST00000509365 500 ntBASIC5.9□□□□□ -1.46
RFC1P35251 NPM1P52-201ENST00000518264 846 ntBASIC5.9□□□□□ -1.46
RFC1P35251 OR8Q1P-201ENST00000526467 655 ntBASIC5.9□□□□□ -1.46
RFC1P35251 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.9□□□□□ -1.46
RFC1P35251 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.9□□□□□ -1.46
RFC1P35251 AL121839.1-201ENST00000556233 1185 ntBASIC5.9□□□□□ -1.46
RFC1P35251 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.9□□□□□ -1.46
RFC1P35251 LINC00557-201ENST00000563184 1279 ntBASIC5.9□□□□□ -1.46
RFC1P35251 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.9□□□□□ -1.46
RFC1P35251 BNIP3P39-201ENST00000601077 554 ntBASIC5.9□□□□□ -1.46
RFC1P35251 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.9□□□□□ -1.46
RFC1P35251 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.9□□□□□ -1.46
RFC1P35251 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.9□□□□□ -1.46
RFC1P35251 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
RFC1P35251 AC015660.5-201ENST00000623238 564 ntBASIC5.9□□□□□ -1.46
RFC1P35251 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC5.9□□□□□ -1.47
RFC1P35251 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
RFC1P35251 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
RFC1P35251 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
RFC1P35251 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
RFC1P35251 AL512283.1-201ENST00000606756 1384 ntBASIC5.9□□□□□ -1.47
RFC1P35251 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.9□□□□□ -1.47
RFC1P35251 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
RFC1P35251 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.47
RFC1P35251 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.9□□□□□ -1.47
RFC1P35251 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
RFC1P35251 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
RFC1P35251 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
RFC1P35251 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
RFC1P35251 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
RFC1P35251 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
RFC1P35251 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
RFC1P35251 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
RFC1P35251 CASC19-260ENST00000641828 2001 ntBASIC5.89□□□□□ -1.47
RFC1P35251 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
RFC1P35251 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
RFC1P35251 RNA5SP131-201ENST00000365452 119 ntBASIC5.89□□□□□ -1.47
RFC1P35251 FIG4-202ENST00000368941 791 ntTSL 3 BASIC5.89□□□□□ -1.47
RFC1P35251 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
RFC1P35251 OOSP1-201ENST00000398992 1270 ntBASIC5.89□□□□□ -1.47
RFC1P35251 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.89□□□□□ -1.47
RFC1P35251 AL662874.1-201ENST00000426065 230 ntBASIC5.89□□□□□ -1.47
RFC1P35251 MTND4LP7-201ENST00000431728 294 ntBASIC5.89□□□□□ -1.47
RFC1P35251 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC5.89□□□□□ -1.47
RFC1P35251 MRPS33P4-201ENST00000434892 317 ntBASIC5.89□□□□□ -1.47
RFC1P35251 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
RFC1P35251 AC099670.2-201ENST00000435130 321 ntBASIC5.89□□□□□ -1.47
RFC1P35251 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC5.89□□□□□ -1.47
RFC1P35251 AC006335.2-201ENST00000437993 330 ntBASIC5.89□□□□□ -1.47
RFC1P35251 AC074367.1-201ENST00000438685 1125 ntBASIC5.89□□□□□ -1.47
RFC1P35251 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC5.89□□□□□ -1.47
RFC1P35251 AL353718.1-201ENST00000451028 517 ntBASIC5.89□□□□□ -1.47
RFC1P35251 AP000547.1-201ENST00000454360 617 ntBASIC5.89□□□□□ -1.47
RFC1P35251 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.89□□□□□ -1.47
RFC1P35251 AC008628.1-201ENST00000508663 265 ntBASIC5.89□□□□□ -1.47
RFC1P35251 ASNSP4-201ENST00000511103 447 ntBASIC5.89□□□□□ -1.47
RFC1P35251 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.89□□□□□ -1.47
RFC1P35251 AC111000.6-201ENST00000514471 709 ntBASIC5.89□□□□□ -1.47
RFC1P35251 RNU6-615P-201ENST00000516065 106 ntBASIC5.89□□□□□ -1.47
RFC1P35251 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.89□□□□□ -1.47
RFC1P35251 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 151.1 ms