Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 RN7SL544P-201ENST00000617232 284 ntBASIC5.28□□□□□ -1.56
PTPN6P29350 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.28□□□□□ -1.56
PTPN6P29350 RN7SL763P-201ENST00000620922 284 ntBASIC5.28□□□□□ -1.56
PTPN6P29350 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.28□□□□□ -1.56
PTPN6P29350 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
PTPN6P29350 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.28□□□□□ -1.56
PTPN6P29350 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
PTPN6P29350 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PTPN6P29350 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.28□□□□□ -1.56
PTPN6P29350 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC5.28□□□□□ -1.56
PTPN6P29350 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PTPN6P29350 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.28□□□□□ -1.56
PTPN6P29350 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.28□□□□□ -1.56
PTPN6P29350 AC093775.1-201ENST00000624154 1868 ntBASIC5.28□□□□□ -1.56
PTPN6P29350 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PTPN6P29350 AC100757.1-201ENST00000616872 1835 ntBASIC5.27□□□□□ -1.57
PTPN6P29350 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.27□□□□□ -1.57
PTPN6P29350 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PTPN6P29350 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.27□□□□□ -1.57
PTPN6P29350 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
PTPN6P29350 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PTPN6P29350 KARSP1-201ENST00000451871 1752 ntBASIC5.27□□□□□ -1.57
PTPN6P29350 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PTPN6P29350 TMSB4XP4-201ENST00000323496 618 ntBASIC5.27□□□□□ -1.57
PTPN6P29350 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PTPN6P29350 Y_RNA.62-201ENST00000362840 99 ntBASIC5.27□□□□□ -1.57
PTPN6P29350 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.27□□□□□ -1.57
PTPN6P29350 SNORA17A-201ENST00000391185 133 ntBASIC5.27□□□□□ -1.57
PTPN6P29350 RPS6P23-201ENST00000413224 722 ntBASIC5.27□□□□□ -1.57
PTPN6P29350 RPSAP35-201ENST00000413753 818 ntBASIC5.27□□□□□ -1.57
PTPN6P29350 RAB9AP4-201ENST00000415230 609 ntBASIC5.27□□□□□ -1.57
PTPN6P29350 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PTPN6P29350 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.27□□□□□ -1.57
PTPN6P29350 RPL7P56-201ENST00000429441 717 ntBASIC5.27□□□□□ -1.57
PTPN6P29350 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.27□□□□□ -1.57
PTPN6P29350 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.27□□□□□ -1.57
PTPN6P29350 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PTPN6P29350 AL161636.2-201ENST00000445179 927 ntBASIC5.27□□□□□ -1.57
PTPN6P29350 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.27□□□□□ -1.57
PTPN6P29350 HMGN1P36-201ENST00000446623 298 ntBASIC5.27□□□□□ -1.57
PTPN6P29350 OR7L1P-201ENST00000456181 380 ntBASIC5.27□□□□□ -1.57
PTPN6P29350 AC022215.1-201ENST00000481770 362 ntBASIC5.27□□□□□ -1.57
PTPN6P29350 RPS3AP15-201ENST00000483874 781 ntBASIC5.27□□□□□ -1.57
PTPN6P29350 CSNK1A1P3-201ENST00000504105 330 ntBASIC5.27□□□□□ -1.57
PTPN6P29350 CCNHP1-201ENST00000513311 678 ntBASIC5.27□□□□□ -1.57
PTPN6P29350 CYCSP22-201ENST00000517555 339 ntBASIC5.27□□□□□ -1.57
PTPN6P29350 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.27□□□□□ -1.57
PTPN6P29350 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.27□□□□□ -1.57
PTPN6P29350 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PTPN6P29350 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.27□□□□□ -1.57
PTPN6P29350 AC027216.1-201ENST00000577726 685 ntBASIC5.27□□□□□ -1.57
PTPN6P29350 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.27□□□□□ -1.57
PTPN6P29350 MIR7853-201ENST00000584820 132 ntBASIC5.27□□□□□ -1.57
PTPN6P29350 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.27□□□□□ -1.57
PTPN6P29350 SNORA17.5-201ENST00000630429 132 ntBASIC5.27□□□□□ -1.57
PTPN6P29350 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.27□□□□□ -1.57
PTPN6P29350 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.27□□□□□ -1.57
PTPN6P29350 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.27□□□□□ -1.57
PTPN6P29350 MIR193BHG-214ENST00000641765 509 ntBASIC5.27□□□□□ -1.57
PTPN6P29350 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
PTPN6P29350 AP000473.2-201ENST00000602659 1537 ntBASIC5.27□□□□□ -1.57
PTPN6P29350 AC093849.1-201ENST00000563631 2209 ntBASIC5.27□□□□□ -1.57
PTPN6P29350 AC027228.2-201ENST00000567141 2154 ntBASIC5.26□□□□□ -1.57
PTPN6P29350 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
PTPN6P29350 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PTPN6P29350 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.26□□□□□ -1.57
PTPN6P29350 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.26□□□□□ -1.57
PTPN6P29350 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PTPN6P29350 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PTPN6P29350 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PTPN6P29350 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
PTPN6P29350 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
PTPN6P29350 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
PTPN6P29350 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.26□□□□□ -1.57
PTPN6P29350 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
PTPN6P29350 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PTPN6P29350 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
PTPN6P29350 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PTPN6P29350 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.26□□□□□ -1.57
PTPN6P29350 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
PTPN6P29350 RNU6-1263P-201ENST00000384601 106 ntBASIC5.26□□□□□ -1.57
PTPN6P29350 HMGB1P20-201ENST00000402555 677 ntBASIC5.26□□□□□ -1.57
PTPN6P29350 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC5.26□□□□□ -1.57
PTPN6P29350 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.26□□□□□ -1.57
PTPN6P29350 AL022331.1-201ENST00000429025 477 ntBASIC5.26□□□□□ -1.57
PTPN6P29350 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.26□□□□□ -1.57
PTPN6P29350 HMGB3P24-201ENST00000433260 622 ntBASIC5.26□□□□□ -1.57
PTPN6P29350 SUMO2P3-201ENST00000438311 288 ntBASIC5.26□□□□□ -1.57
PTPN6P29350 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.26□□□□□ -1.57
PTPN6P29350 RPS23P6-201ENST00000466136 431 ntBASIC5.26□□□□□ -1.57
PTPN6P29350 AC091917.2-201ENST00000505002 744 ntBASIC5.26□□□□□ -1.57
PTPN6P29350 AC011411.1-201ENST00000509592 876 ntBASIC5.26□□□□□ -1.57
PTPN6P29350 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.26□□□□□ -1.57
PTPN6P29350 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.26□□□□□ -1.57
PTPN6P29350 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.26□□□□□ -1.57
PTPN6P29350 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.26□□□□□ -1.57
PTPN6P29350 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.26□□□□□ -1.57
PTPN6P29350 AC087565.3-203ENST00000641018 837 ntBASIC5.26□□□□□ -1.57
PTPN6P29350 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.26□□□□□ -1.57
PTPN6P29350 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms