Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 RNF148-202ENST00000447240 839 ntTSL 2 BASIC8.59□□□□□ -1.03
CSB-PGBD3P0DP91 PPIAP7-201ENST00000454070 489 ntBASIC8.59□□□□□ -1.03
CSB-PGBD3P0DP91 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC8.59□□□□□ -1.03
CSB-PGBD3P0DP91 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC8.59□□□□□ -1.03
CSB-PGBD3P0DP91 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC8.59□□□□□ -1.03
CSB-PGBD3P0DP91 AC074386.1-201ENST00000476560 767 ntBASIC8.59□□□□□ -1.03
CSB-PGBD3P0DP91 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC8.59□□□□□ -1.03
CSB-PGBD3P0DP91 PSMA2P2-201ENST00000504319 686 ntBASIC8.59□□□□□ -1.03
CSB-PGBD3P0DP91 SETP21-201ENST00000514799 892 ntBASIC8.59□□□□□ -1.03
CSB-PGBD3P0DP91 RN7SKP238-201ENST00000516483 249 ntBASIC8.59□□□□□ -1.03
CSB-PGBD3P0DP91 AC060775.1-201ENST00000518241 520 ntBASIC8.59□□□□□ -1.03
CSB-PGBD3P0DP91 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC8.59□□□□□ -1.03
CSB-PGBD3P0DP91 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC8.59□□□□□ -1.03
CSB-PGBD3P0DP91 AP000620.1-201ENST00000527147 504 ntBASIC8.59□□□□□ -1.03
CSB-PGBD3P0DP91 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC8.59□□□□□ -1.03
CSB-PGBD3P0DP91 SERPINE4P-201ENST00000554978 281 ntBASIC8.59□□□□□ -1.03
CSB-PGBD3P0DP91 LINC00556-201ENST00000569603 412 ntBASIC8.59□□□□□ -1.03
CSB-PGBD3P0DP91 AC010327.2-201ENST00000587647 488 ntBASIC8.59□□□□□ -1.03
CSB-PGBD3P0DP91 KCNMA1-AS1-204ENST00000595702 504 ntTSL 5 BASIC8.59□□□□□ -1.03
CSB-PGBD3P0DP91 AF131215.7-201ENST00000602443 707 ntBASIC8.59□□□□□ -1.03
CSB-PGBD3P0DP91 AC119501.1-201ENST00000603646 475 ntBASIC8.59□□□□□ -1.03
CSB-PGBD3P0DP91 MTND3P19-201ENST00000603825 345 ntBASIC8.59□□□□□ -1.03
CSB-PGBD3P0DP91 AP002360.3-201ENST00000607673 710 ntBASIC8.59□□□□□ -1.03
CSB-PGBD3P0DP91 AL021707.7-201ENST00000607991 416 ntBASIC8.59□□□□□ -1.03
CSB-PGBD3P0DP91 AC116651.1-201ENST00000609724 556 ntBASIC8.59□□□□□ -1.03
CSB-PGBD3P0DP91 AL590240.3-201ENST00000621416 943 ntBASIC8.59□□□□□ -1.03
CSB-PGBD3P0DP91 AC091931.1-201ENST00000623488 728 ntBASIC8.59□□□□□ -1.03
CSB-PGBD3P0DP91 RPL23AP61-201ENST00000623642 466 ntBASIC8.59□□□□□ -1.03
CSB-PGBD3P0DP91 AC129778.1-202ENST00000623812 261 ntBASIC8.59□□□□□ -1.03
CSB-PGBD3P0DP91 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC8.59□□□□□ -1.03
CSB-PGBD3P0DP91 SNORA17.5-201ENST00000630429 132 ntBASIC8.59□□□□□ -1.03
CSB-PGBD3P0DP91 AL591379.1-207ENST00000635982 261 ntBASIC8.59□□□□□ -1.03
CSB-PGBD3P0DP91 AMYH02020865.1-205ENST00000636189 261 ntBASIC8.59□□□□□ -1.03
CSB-PGBD3P0DP91 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC8.59□□□□□ -1.03
CSB-PGBD3P0DP91 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
CSB-PGBD3P0DP91 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
CSB-PGBD3P0DP91 AC009166.2-201ENST00000624410 2833 ntBASIC8.59□□□□□ -1.03
CSB-PGBD3P0DP91 PLA2G7-202ENST00000537365 1747 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
CSB-PGBD3P0DP91 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC8.59□□□□□ -1.03
CSB-PGBD3P0DP91 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC8.59□□□□□ -1.03
CSB-PGBD3P0DP91 EIF3L-203ENST00000412331 3220 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
CSB-PGBD3P0DP91 GARNL3-202ENST00000373387 3800 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
CSB-PGBD3P0DP91 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
CSB-PGBD3P0DP91 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC8.59□□□□□ -1.03
CSB-PGBD3P0DP91 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC8.59□□□□□ -1.03
CSB-PGBD3P0DP91 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
CSB-PGBD3P0DP91 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
CSB-PGBD3P0DP91 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
CSB-PGBD3P0DP91 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
CSB-PGBD3P0DP91 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
CSB-PGBD3P0DP91 CD46-201ENST00000322875 3278 ntAPPRIS P4 TSL 1 (best) BASIC8.58□□□□□ -1.04
CSB-PGBD3P0DP91 CD46-207ENST00000367041 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
CSB-PGBD3P0DP91 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
CSB-PGBD3P0DP91 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC8.58□□□□□ -1.04
CSB-PGBD3P0DP91 snosnR66.1-201ENST00000391095 99 ntBASIC8.58□□□□□ -1.04
CSB-PGBD3P0DP91 RNU4ATAC2P-201ENST00000408674 126 ntBASIC8.58□□□□□ -1.04
CSB-PGBD3P0DP91 XIST-201ENST00000416330 750 ntTSL 2 BASIC8.58□□□□□ -1.04
CSB-PGBD3P0DP91 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC8.58□□□□□ -1.04
CSB-PGBD3P0DP91 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC8.58□□□□□ -1.04
CSB-PGBD3P0DP91 AL355607.1-201ENST00000427745 295 ntTSL 3 BASIC8.58□□□□□ -1.04
CSB-PGBD3P0DP91 AL035458.1-201ENST00000433096 585 ntBASIC8.58□□□□□ -1.04
CSB-PGBD3P0DP91 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC8.58□□□□□ -1.04
CSB-PGBD3P0DP91 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC8.58□□□□□ -1.04
CSB-PGBD3P0DP91 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC8.58□□□□□ -1.04
CSB-PGBD3P0DP91 OR51B8P-201ENST00000449892 769 ntBASIC8.58□□□□□ -1.04
CSB-PGBD3P0DP91 AC244505.3-201ENST00000454598 187 ntBASIC8.58□□□□□ -1.04
CSB-PGBD3P0DP91 OSTCP1-201ENST00000455507 450 ntBASIC8.58□□□□□ -1.04
CSB-PGBD3P0DP91 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC8.58□□□□□ -1.04
CSB-PGBD3P0DP91 RPL12P31-201ENST00000478433 450 ntBASIC8.58□□□□□ -1.04
CSB-PGBD3P0DP91 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC8.58□□□□□ -1.04
CSB-PGBD3P0DP91 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC8.58□□□□□ -1.04
CSB-PGBD3P0DP91 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC8.58□□□□□ -1.04
CSB-PGBD3P0DP91 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC8.58□□□□□ -1.04
CSB-PGBD3P0DP91 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC8.58□□□□□ -1.04
CSB-PGBD3P0DP91 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC8.58□□□□□ -1.04
CSB-PGBD3P0DP91 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC8.58□□□□□ -1.04
CSB-PGBD3P0DP91 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC8.58□□□□□ -1.04
CSB-PGBD3P0DP91 AC091965.4-201ENST00000607691 587 ntBASIC8.58□□□□□ -1.04
CSB-PGBD3P0DP91 MALAT1-212ENST00000618132 725 ntTSL 2 BASIC8.58□□□□□ -1.04
CSB-PGBD3P0DP91 AC010608.2-201ENST00000624830 470 ntBASIC8.58□□□□□ -1.04
CSB-PGBD3P0DP91 AC068137.3-201ENST00000639191 341 ntBASIC8.58□□□□□ -1.04
CSB-PGBD3P0DP91 AC073869.6-201ENST00000640656 341 ntBASIC8.58□□□□□ -1.04
CSB-PGBD3P0DP91 OR11H2-202ENST00000641517 1085 ntBASIC8.58□□□□□ -1.04
CSB-PGBD3P0DP91 ENSA-204ENST00000356527 2546 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
CSB-PGBD3P0DP91 NAMPTP1-201ENST00000440465 2514 ntBASIC8.58□□□□□ -1.04
CSB-PGBD3P0DP91 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
CSB-PGBD3P0DP91 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC8.58□□□□□ -1.04
CSB-PGBD3P0DP91 AL034417.4-202ENST00000642135 2236 ntBASIC8.58□□□□□ -1.04
CSB-PGBD3P0DP91 DMC1-203ENST00000428462 2082 ntTSL 2 BASIC8.58□□□□□ -1.04
CSB-PGBD3P0DP91 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC8.58□□□□□ -1.04
CSB-PGBD3P0DP91 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC8.58□□□□□ -1.04
CSB-PGBD3P0DP91 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC8.58□□□□□ -1.04
CSB-PGBD3P0DP91 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
CSB-PGBD3P0DP91 DNAJC5G-203ENST00000404433 1647 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
CSB-PGBD3P0DP91 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC8.58□□□□□ -1.04
CSB-PGBD3P0DP91 CA1-225ENST00000626824 2405 ntTSL 5 BASIC8.58□□□□□ -1.04
CSB-PGBD3P0DP91 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC8.57□□□□□ -1.04
CSB-PGBD3P0DP91 MEF2C-217ENST00000510942 3446 ntTSL 5 BASIC8.57□□□□□ -1.04
CSB-PGBD3P0DP91 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
CSB-PGBD3P0DP91 AL023806.3-201ENST00000638502 2704 ntBASIC8.57□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms