Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
FREM3P0C091 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC4.81□□□□□ -1.64
FREM3P0C091 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
FREM3P0C091 RNU1-19P-201ENST00000363306 165 ntBASIC4.81□□□□□ -1.64
FREM3P0C091 RNA5SP507-201ENST00000363603 121 ntBASIC4.81□□□□□ -1.64
FREM3P0C091 RNU1-74P-201ENST00000384108 171 ntBASIC4.81□□□□□ -1.64
FREM3P0C091 SNORA5.1-201ENST00000384275 131 ntBASIC4.81□□□□□ -1.64
FREM3P0C091 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC4.81□□□□□ -1.64
FREM3P0C091 AL133325.1-201ENST00000421090 382 ntBASIC4.81□□□□□ -1.64
FREM3P0C091 AC108161.1-201ENST00000461060 402 ntBASIC4.81□□□□□ -1.64
FREM3P0C091 AP000797.2-201ENST00000475768 606 ntBASIC4.81□□□□□ -1.64
FREM3P0C091 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC4.81□□□□□ -1.64
FREM3P0C091 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
FREM3P0C091 IMPA1P1-201ENST00000510718 842 ntBASIC4.81□□□□□ -1.64
FREM3P0C091 AC021193.1-201ENST00000511607 420 ntBASIC4.81□□□□□ -1.64
FREM3P0C091 HMGN1P9-201ENST00000515212 298 ntBASIC4.81□□□□□ -1.64
FREM3P0C091 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.81□□□□□ -1.64
FREM3P0C091 SCARNA16.4-201ENST00000516956 187 ntBASIC4.81□□□□□ -1.64
FREM3P0C091 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC4.81□□□□□ -1.64
FREM3P0C091 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC4.81□□□□□ -1.64
FREM3P0C091 LDHC-205ENST00000537486 583 ntTSL 5 BASIC4.81□□□□□ -1.64
FREM3P0C091 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC4.81□□□□□ -1.64
FREM3P0C091 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.81□□□□□ -1.64
FREM3P0C091 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC4.8□□□□□ -1.64
FREM3P0C091 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC4.8□□□□□ -1.64
FREM3P0C091 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
FREM3P0C091 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
FREM3P0C091 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
FREM3P0C091 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC4.8□□□□□ -1.64
FREM3P0C091 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
FREM3P0C091 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC4.8□□□□□ -1.64
FREM3P0C091 SSX3-202ENST00000376893 800 ntTSL 2 BASIC4.8□□□□□ -1.64
FREM3P0C091 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.8□□□□□ -1.64
FREM3P0C091 AL359265.1-201ENST00000440296 795 ntBASIC4.8□□□□□ -1.64
FREM3P0C091 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC4.8□□□□□ -1.64
FREM3P0C091 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.8□□□□□ -1.64
FREM3P0C091 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.8□□□□□ -1.64
FREM3P0C091 RN7SL329P-201ENST00000467740 299 ntBASIC4.8□□□□□ -1.64
FREM3P0C091 AC097484.1-201ENST00000471148 389 ntBASIC4.8□□□□□ -1.64
FREM3P0C091 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.8□□□□□ -1.64
FREM3P0C091 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC4.8□□□□□ -1.64
FREM3P0C091 AC015720.2-201ENST00000567709 334 ntBASIC4.8□□□□□ -1.64
FREM3P0C091 MIR7853-201ENST00000584820 132 ntBASIC4.8□□□□□ -1.64
FREM3P0C091 AL356608.1-201ENST00000610034 820 ntBASIC4.8□□□□□ -1.64
FREM3P0C091 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
FREM3P0C091 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC4.8□□□□□ -1.64
FREM3P0C091 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
FREM3P0C091 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
FREM3P0C091 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
FREM3P0C091 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
FREM3P0C091 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
FREM3P0C091 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
FREM3P0C091 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
FREM3P0C091 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC4.8□□□□□ -1.64
FREM3P0C091 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
FREM3P0C091 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC4.8□□□□□ -1.64
FREM3P0C091 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
FREM3P0C091 PANDAR-201ENST00000629595 1506 ntBASIC4.8□□□□□ -1.64
FREM3P0C091 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
FREM3P0C091 AP001029.2-203ENST00000589795 4910 ntBASIC4.8□□□□□ -1.64
FREM3P0C091 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
FREM3P0C091 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
FREM3P0C091 RNA5SP90-201ENST00000364801 99 ntBASIC4.79□□□□□ -1.64
FREM3P0C091 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC4.79□□□□□ -1.64
FREM3P0C091 RPL19P16-201ENST00000433839 588 ntBASIC4.79□□□□□ -1.64
FREM3P0C091 AL163193.1-201ENST00000444895 788 ntBASIC4.79□□□□□ -1.64
FREM3P0C091 RN7SL30P-201ENST00000488416 306 ntBASIC4.79□□□□□ -1.64
FREM3P0C091 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC4.79□□□□□ -1.64
FREM3P0C091 AC109464.1-201ENST00000511091 819 ntBASIC4.79□□□□□ -1.64
FREM3P0C091 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC4.79□□□□□ -1.64
FREM3P0C091 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC4.79□□□□□ -1.64
FREM3P0C091 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC4.79□□□□□ -1.64
FREM3P0C091 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.79□□□□□ -1.64
FREM3P0C091 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
FREM3P0C091 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC4.79□□□□□ -1.64
FREM3P0C091 FKBP1AP1-201ENST00000594588 318 ntBASIC4.79□□□□□ -1.64
FREM3P0C091 AP002884.5-201ENST00000595053 1132 ntBASIC4.79□□□□□ -1.64
FREM3P0C091 RNA5SP439-201ENST00000617595 124 ntBASIC4.79□□□□□ -1.64
FREM3P0C091 AC078880.4-201ENST00000617627 1749 ntBASIC4.79□□□□□ -1.64
FREM3P0C091 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
FREM3P0C091 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
FREM3P0C091 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
FREM3P0C091 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
FREM3P0C091 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC4.79□□□□□ -1.64
FREM3P0C091 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
FREM3P0C091 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC4.79□□□□□ -1.64
FREM3P0C091 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC4.79□□□□□ -1.64
FREM3P0C091 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
FREM3P0C091 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
FREM3P0C091 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
FREM3P0C091 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
FREM3P0C091 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
FREM3P0C091 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
FREM3P0C091 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
FREM3P0C091 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC4.79□□□□□ -1.64
FREM3P0C091 RPL21P67-201ENST00000402896 478 ntBASIC4.79□□□□□ -1.64
FREM3P0C091 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.79□□□□□ -1.64
FREM3P0C091 RPL23AP27-201ENST00000415161 451 ntBASIC4.79□□□□□ -1.64
FREM3P0C091 TEX41-206ENST00000432608 661 ntTSL 3 BASIC4.79□□□□□ -1.64
FREM3P0C091 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms