Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC4.45□□□□□ -1.7
CTSDP07339 AP000648.1-201ENST00000529682 397 ntBASIC4.45□□□□□ -1.7
CTSDP07339 SETP1-201ENST00000556014 845 ntBASIC4.45□□□□□ -1.7
CTSDP07339 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC4.45□□□□□ -1.7
CTSDP07339 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC4.45□□□□□ -1.7
CTSDP07339 AC134669.1-201ENST00000581275 672 ntBASIC4.45□□□□□ -1.7
CTSDP07339 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.45□□□□□ -1.7
CTSDP07339 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC4.45□□□□□ -1.7
CTSDP07339 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.45□□□□□ -1.7
CTSDP07339 AL138895.2-201ENST00000603019 178 ntBASIC4.45□□□□□ -1.7
CTSDP07339 AL499605.1-201ENST00000604628 403 ntBASIC4.45□□□□□ -1.7
CTSDP07339 AL031601.1-201ENST00000605702 394 ntBASIC4.45□□□□□ -1.7
CTSDP07339 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
CTSDP07339 BX005214.3-202ENST00000619809 325 ntBASIC4.45□□□□□ -1.7
CTSDP07339 AC129778.1-202ENST00000623812 261 ntBASIC4.45□□□□□ -1.7
CTSDP07339 AL591379.1-207ENST00000635982 261 ntBASIC4.45□□□□□ -1.7
CTSDP07339 AMYH02020865.1-205ENST00000636189 261 ntBASIC4.45□□□□□ -1.7
CTSDP07339 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CTSDP07339 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CTSDP07339 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CTSDP07339 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.45□□□□□ -1.7
CTSDP07339 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.45□□□□□ -1.7
CTSDP07339 AC023421.1-201ENST00000590535 1785 ntBASIC4.45□□□□□ -1.7
CTSDP07339 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.45□□□□□ -1.7
CTSDP07339 SLC9B1P1-201ENST00000331172 1337 ntBASIC4.45□□□□□ -1.7
CTSDP07339 AC021242.1-201ENST00000507315 2035 ntBASIC4.45□□□□□ -1.7
CTSDP07339 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
CTSDP07339 SOCS5P3-201ENST00000425115 1576 ntBASIC4.44□□□□□ -1.7
CTSDP07339 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
CTSDP07339 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
CTSDP07339 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CTSDP07339 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.44□□□□□ -1.7
CTSDP07339 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC4.44□□□□□ -1.7
CTSDP07339 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CTSDP07339 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CTSDP07339 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CTSDP07339 AMELX-201ENST00000348912 737 ntTSL 5 BASIC4.44□□□□□ -1.7
CTSDP07339 RN7SKP6-201ENST00000364795 319 ntBASIC4.44□□□□□ -1.7
CTSDP07339 SUGT1P2-201ENST00000379452 992 ntBASIC4.44□□□□□ -1.7
CTSDP07339 MIR621-201ENST00000384919 96 ntBASIC4.44□□□□□ -1.7
CTSDP07339 RN7SKP240-201ENST00000410583 375 ntBASIC4.44□□□□□ -1.7
CTSDP07339 RMRPP5-201ENST00000411156 267 ntBASIC4.44□□□□□ -1.7
CTSDP07339 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC4.44□□□□□ -1.7
CTSDP07339 ATP5A1P8-201ENST00000423669 1291 ntBASIC4.44□□□□□ -1.7
CTSDP07339 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC4.44□□□□□ -1.7
CTSDP07339 HMGB3P24-201ENST00000433260 622 ntBASIC4.44□□□□□ -1.7
CTSDP07339 NDUFS5P5-201ENST00000437256 321 ntBASIC4.44□□□□□ -1.7
CTSDP07339 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.44□□□□□ -1.7
CTSDP07339 GAPDHP58-201ENST00000438477 1006 ntBASIC4.44□□□□□ -1.7
CTSDP07339 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC4.44□□□□□ -1.7
CTSDP07339 DNAJB5P1-201ENST00000454004 806 ntBASIC4.44□□□□□ -1.7
CTSDP07339 RPL7P41-201ENST00000485823 957 ntBASIC4.44□□□□□ -1.7
CTSDP07339 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.44□□□□□ -1.7
CTSDP07339 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC4.44□□□□□ -1.7
CTSDP07339 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.44□□□□□ -1.7
CTSDP07339 MTND6P2-201ENST00000512226 524 ntBASIC4.44□□□□□ -1.7
CTSDP07339 RN7SKP70-201ENST00000516655 271 ntBASIC4.44□□□□□ -1.7
CTSDP07339 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.44□□□□□ -1.7
CTSDP07339 MRPS16P1-201ENST00000523462 412 ntBASIC4.44□□□□□ -1.7
CTSDP07339 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC4.44□□□□□ -1.7
CTSDP07339 HMGB1P42-201ENST00000532126 553 ntBASIC4.44□□□□□ -1.7
CTSDP07339 BNIP3P1-201ENST00000547295 580 ntBASIC4.44□□□□□ -1.7
CTSDP07339 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC4.44□□□□□ -1.7
CTSDP07339 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC4.44□□□□□ -1.7
CTSDP07339 DPPA2P4-201ENST00000563717 878 ntBASIC4.44□□□□□ -1.7
CTSDP07339 AC011840.5-201ENST00000582125 771 ntBASIC4.44□□□□□ -1.7
CTSDP07339 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC4.44□□□□□ -1.7
CTSDP07339 AC067773.1-201ENST00000603284 1094 ntBASIC4.44□□□□□ -1.7
CTSDP07339 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CTSDP07339 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC4.44□□□□□ -1.7
CTSDP07339 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
CTSDP07339 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CTSDP07339 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CTSDP07339 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CTSDP07339 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CTSDP07339 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
CTSDP07339 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CTSDP07339 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CTSDP07339 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.44□□□□□ -1.7
CTSDP07339 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.44□□□□□ -1.7
CTSDP07339 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.44□□□□□ -1.7
CTSDP07339 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CTSDP07339 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
CTSDP07339 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CTSDP07339 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
CTSDP07339 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CTSDP07339 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CTSDP07339 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CTSDP07339 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
CTSDP07339 SAMMSON-213ENST00000641336 1521 ntBASIC4.43□□□□□ -1.7
CTSDP07339 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CTSDP07339 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.43□□□□□ -1.7
CTSDP07339 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.43□□□□□ -1.7
CTSDP07339 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
CTSDP07339 TMSB4XP2-201ENST00000335179 210 ntBASIC4.43□□□□□ -1.7
CTSDP07339 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
CTSDP07339 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC4.43□□□□□ -1.7
CTSDP07339 RNA5SP273-201ENST00000362484 113 ntBASIC4.43□□□□□ -1.7
CTSDP07339 RNU1-150P-201ENST00000362491 162 ntBASIC4.43□□□□□ -1.7
CTSDP07339 RNA5SP477-201ENST00000362639 119 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms