Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 CLMN-206ENST00000556441 452 ntTSL 5 BASIC4.8□□□□□ -1.64
APOA1P02647 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC4.8□□□□□ -1.64
APOA1P02647 MED31-202ENST00000574128 619 ntTSL 3 BASIC4.8□□□□□ -1.64
APOA1P02647 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC4.8□□□□□ -1.64
APOA1P02647 MIR4260-201ENST00000583107 67 ntBASIC4.8□□□□□ -1.64
APOA1P02647 MIR3187-201ENST00000583431 70 ntBASIC4.8□□□□□ -1.64
APOA1P02647 AC090774.2-201ENST00000584708 322 ntBASIC4.8□□□□□ -1.64
APOA1P02647 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC4.8□□□□□ -1.64
APOA1P02647 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC4.8□□□□□ -1.64
APOA1P02647 AL008729.2-201ENST00000606393 473 ntBASIC4.8□□□□□ -1.64
APOA1P02647 STARD13-AS-224ENST00000608496 787 ntTSL 5 BASIC4.8□□□□□ -1.64
APOA1P02647 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC4.8□□□□□ -1.64
APOA1P02647 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
APOA1P02647 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.8□□□□□ -1.64
APOA1P02647 VPS35P1-201ENST00000563400 1518 ntBASIC4.8□□□□□ -1.64
APOA1P02647 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
APOA1P02647 NXF4-202ENST00000416098 1465 ntBASIC4.8□□□□□ -1.64
APOA1P02647 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
APOA1P02647 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.8□□□□□ -1.64
APOA1P02647 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC4.8□□□□□ -1.64
APOA1P02647 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
APOA1P02647 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
APOA1P02647 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
APOA1P02647 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
APOA1P02647 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
APOA1P02647 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.79□□□□□ -1.64
APOA1P02647 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
APOA1P02647 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
APOA1P02647 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
APOA1P02647 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.79□□□□□ -1.64
APOA1P02647 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
APOA1P02647 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
APOA1P02647 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
APOA1P02647 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.79□□□□□ -1.64
APOA1P02647 RNU1-19P-201ENST00000363306 165 ntBASIC4.79□□□□□ -1.64
APOA1P02647 AL353625.1-202ENST00000366273 571 ntBASIC4.79□□□□□ -1.64
APOA1P02647 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
APOA1P02647 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
APOA1P02647 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
APOA1P02647 RN7SKP39-201ENST00000410773 322 ntBASIC4.79□□□□□ -1.64
APOA1P02647 RN7SKP108-201ENST00000411367 328 ntBASIC4.79□□□□□ -1.64
APOA1P02647 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC4.79□□□□□ -1.64
APOA1P02647 AL357752.1-201ENST00000412817 349 ntBASIC4.79□□□□□ -1.64
APOA1P02647 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.79□□□□□ -1.64
APOA1P02647 AC010086.1-201ENST00000437359 1052 ntBASIC4.79□□□□□ -1.64
APOA1P02647 RPSAP41-201ENST00000439695 860 ntBASIC4.79□□□□□ -1.64
APOA1P02647 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC4.79□□□□□ -1.64
APOA1P02647 AL445991.1-201ENST00000450381 475 ntBASIC4.79□□□□□ -1.64
APOA1P02647 AC022431.1-201ENST00000450941 438 ntBASIC4.79□□□□□ -1.64
APOA1P02647 AL034369.1-201ENST00000453808 477 ntBASIC4.79□□□□□ -1.64
APOA1P02647 RPL31P11-202ENST00000454082 372 ntBASIC4.79□□□□□ -1.64
APOA1P02647 GEMIN2P1-201ENST00000454246 752 ntBASIC4.79□□□□□ -1.64
APOA1P02647 CYCSP34-201ENST00000458172 304 ntBASIC4.79□□□□□ -1.64
APOA1P02647 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.79□□□□□ -1.64
APOA1P02647 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.79□□□□□ -1.64
APOA1P02647 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC4.79□□□□□ -1.64
APOA1P02647 snoU109.6-201ENST00000516831 118 ntBASIC4.79□□□□□ -1.64
APOA1P02647 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC4.79□□□□□ -1.64
APOA1P02647 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
APOA1P02647 OR1E3-201ENST00000575608 948 ntBASIC4.79□□□□□ -1.64
APOA1P02647 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC4.79□□□□□ -1.64
APOA1P02647 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
APOA1P02647 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC4.79□□□□□ -1.64
APOA1P02647 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC4.79□□□□□ -1.64
APOA1P02647 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC4.79□□□□□ -1.64
APOA1P02647 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
APOA1P02647 MIR6807-201ENST00000621968 92 ntBASIC4.79□□□□□ -1.64
APOA1P02647 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC4.79□□□□□ -1.64
APOA1P02647 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC4.79□□□□□ -1.64
APOA1P02647 AL596275.2-207ENST00000641188 675 ntBASIC4.79□□□□□ -1.64
APOA1P02647 AL596275.2-204ENST00000641628 552 ntBASIC4.79□□□□□ -1.64
APOA1P02647 AL596275.2-206ENST00000641957 626 ntBASIC4.79□□□□□ -1.64
APOA1P02647 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC4.79□□□□□ -1.64
APOA1P02647 PWAR1-201ENST00000624188 2414 ntBASIC4.79□□□□□ -1.64
APOA1P02647 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
APOA1P02647 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
APOA1P02647 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.79□□□□□ -1.64
APOA1P02647 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.79□□□□□ -1.64
APOA1P02647 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
APOA1P02647 SPANXN2-201ENST00000598475 1378 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
APOA1P02647 AC107027.3-201ENST00000565095 3473 ntBASIC4.78□□□□□ -1.64
APOA1P02647 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC4.78□□□□□ -1.64
APOA1P02647 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
APOA1P02647 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
APOA1P02647 GAPDHP24-201ENST00000328713 983 ntBASIC4.78□□□□□ -1.64
APOA1P02647 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
APOA1P02647 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
APOA1P02647 RNU6-673P-201ENST00000365084 104 ntBASIC4.78□□□□□ -1.64
APOA1P02647 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
APOA1P02647 MIR301B-201ENST00000390813 78 ntBASIC4.78□□□□□ -1.64
APOA1P02647 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.78□□□□□ -1.64
APOA1P02647 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
APOA1P02647 HIST1H3PS1-201ENST00000404612 417 ntBASIC4.78□□□□□ -1.64
APOA1P02647 RN7SKP29-201ENST00000410957 272 ntBASIC4.78□□□□□ -1.64
APOA1P02647 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC4.78□□□□□ -1.64
APOA1P02647 AC104843.2-201ENST00000427666 297 ntBASIC4.78□□□□□ -1.64
APOA1P02647 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC4.78□□□□□ -1.64
APOA1P02647 RPS6P2-201ENST00000454208 705 ntBASIC4.78□□□□□ -1.64
APOA1P02647 EIF3LP2-201ENST00000457262 807 ntBASIC4.78□□□□□ -1.64
APOA1P02647 RN7SL447P-201ENST00000494711 245 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms