Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
HLA-DQB1P01920 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.59□□□□□ -1.67
HLA-DQB1P01920 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
HLA-DQB1P01920 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
HLA-DQB1P01920 AC093591.2-201ENST00000565254 3843 ntBASIC4.59□□□□□ -1.67
HLA-DQB1P01920 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
HLA-DQB1P01920 AC005294.1-201ENST00000355509 281 ntBASIC4.59□□□□□ -1.67
HLA-DQB1P01920 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
HLA-DQB1P01920 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
HLA-DQB1P01920 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC4.59□□□□□ -1.67
HLA-DQB1P01920 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC4.59□□□□□ -1.67
HLA-DQB1P01920 AL022331.1-201ENST00000429025 477 ntBASIC4.59□□□□□ -1.67
HLA-DQB1P01920 RPS26P4-201ENST00000431743 355 ntBASIC4.59□□□□□ -1.67
HLA-DQB1P01920 NDUFS5P5-201ENST00000437256 321 ntBASIC4.59□□□□□ -1.67
HLA-DQB1P01920 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.59□□□□□ -1.67
HLA-DQB1P01920 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
HLA-DQB1P01920 TIMM8BP2-201ENST00000445940 251 ntBASIC4.59□□□□□ -1.67
HLA-DQB1P01920 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC4.59□□□□□ -1.67
HLA-DQB1P01920 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC4.59□□□□□ -1.67
HLA-DQB1P01920 AC068228.1-201ENST00000461723 211 ntBASIC4.59□□□□□ -1.67
HLA-DQB1P01920 RPL7P41-201ENST00000485823 957 ntBASIC4.59□□□□□ -1.67
HLA-DQB1P01920 AC020890.1-201ENST00000491837 504 ntBASIC4.59□□□□□ -1.67
HLA-DQB1P01920 UGT2B26P-201ENST00000508672 1613 ntBASIC4.59□□□□□ -1.67
HLA-DQB1P01920 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
HLA-DQB1P01920 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC4.59□□□□□ -1.67
HLA-DQB1P01920 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC4.59□□□□□ -1.67
HLA-DQB1P01920 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
HLA-DQB1P01920 DCN-210ENST00000547568 823 ntTSL 3 BASIC4.59□□□□□ -1.67
HLA-DQB1P01920 AC007342.5-201ENST00000571340 2142 ntBASIC4.59□□□□□ -1.67
HLA-DQB1P01920 RN7SL356P-201ENST00000582228 248 ntBASIC4.59□□□□□ -1.67
HLA-DQB1P01920 OR7M1P-201ENST00000608946 533 ntBASIC4.59□□□□□ -1.67
HLA-DQB1P01920 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
HLA-DQB1P01920 MAPK10-349ENST00000641767 3661 ntBASIC4.59□□□□□ -1.67
HLA-DQB1P01920 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
HLA-DQB1P01920 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
HLA-DQB1P01920 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
HLA-DQB1P01920 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.67
HLA-DQB1P01920 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.59□□□□□ -1.68
HLA-DQB1P01920 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DQB1P01920 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DQB1P01920 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DQB1P01920 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC4.58□□□□□ -1.68
HLA-DQB1P01920 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.58□□□□□ -1.68
HLA-DQB1P01920 AC012078.1-201ENST00000405035 1646 ntBASIC4.58□□□□□ -1.68
HLA-DQB1P01920 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.58□□□□□ -1.68
HLA-DQB1P01920 RNU1-65P-201ENST00000363919 148 ntBASIC4.58□□□□□ -1.68
HLA-DQB1P01920 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DQB1P01920 MRRF-207ENST00000373729 870 ntTSL 3 BASIC4.58□□□□□ -1.68
HLA-DQB1P01920 TMBIM7P-201ENST00000418074 855 ntBASIC4.58□□□□□ -1.68
HLA-DQB1P01920 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC4.58□□□□□ -1.68
HLA-DQB1P01920 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.58□□□□□ -1.68
HLA-DQB1P01920 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC4.58□□□□□ -1.68
HLA-DQB1P01920 GAPDHP58-201ENST00000438477 1006 ntBASIC4.58□□□□□ -1.68
HLA-DQB1P01920 SERPINA7P1-201ENST00000443077 631 ntBASIC4.58□□□□□ -1.68
HLA-DQB1P01920 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC4.58□□□□□ -1.68
HLA-DQB1P01920 AC093166.3-201ENST00000448785 303 ntBASIC4.58□□□□□ -1.68
HLA-DQB1P01920 AC114982.2-201ENST00000461396 358 ntBASIC4.58□□□□□ -1.68
HLA-DQB1P01920 AC044810.1-201ENST00000480271 711 ntBASIC4.58□□□□□ -1.68
HLA-DQB1P01920 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC4.58□□□□□ -1.68
HLA-DQB1P01920 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC4.58□□□□□ -1.68
HLA-DQB1P01920 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.58□□□□□ -1.68
HLA-DQB1P01920 HMGB1P19-201ENST00000517578 577 ntBASIC4.58□□□□□ -1.68
HLA-DQB1P01920 RBM7-208ENST00000545678 867 ntTSL 3 BASIC4.58□□□□□ -1.68
HLA-DQB1P01920 AL845552.1-201ENST00000556820 323 ntBASIC4.58□□□□□ -1.68
HLA-DQB1P01920 AGGF1P9-201ENST00000561884 913 ntBASIC4.58□□□□□ -1.68
HLA-DQB1P01920 DPPA2P4-201ENST00000563717 878 ntBASIC4.58□□□□□ -1.68
HLA-DQB1P01920 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC4.58□□□□□ -1.68
HLA-DQB1P01920 RN7SL52P-201ENST00000584271 284 ntBASIC4.58□□□□□ -1.68
HLA-DQB1P01920 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC4.58□□□□□ -1.68
HLA-DQB1P01920 AC097505.1-201ENST00000610199 565 ntBASIC4.58□□□□□ -1.68
HLA-DQB1P01920 RN7SL787P-201ENST00000613000 284 ntBASIC4.58□□□□□ -1.68
HLA-DQB1P01920 AC108359.1-201ENST00000616451 1211 ntBASIC4.58□□□□□ -1.68
HLA-DQB1P01920 RN7SL544P-201ENST00000617232 284 ntBASIC4.58□□□□□ -1.68
HLA-DQB1P01920 AC241377.1-201ENST00000619797 406 ntBASIC4.58□□□□□ -1.68
HLA-DQB1P01920 RN7SL763P-201ENST00000620922 284 ntBASIC4.58□□□□□ -1.68
HLA-DQB1P01920 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC4.58□□□□□ -1.68
HLA-DQB1P01920 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DQB1P01920 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC4.58□□□□□ -1.68
HLA-DQB1P01920 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DQB1P01920 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.58□□□□□ -1.68
HLA-DQB1P01920 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DQB1P01920 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.58□□□□□ -1.68
HLA-DQB1P01920 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DQB1P01920 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DQB1P01920 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.58□□□□□ -1.68
HLA-DQB1P01920 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DQB1P01920 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DQB1P01920 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
HLA-DQB1P01920 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HLA-DQB1P01920 DHX9P1-201ENST00000436565 3076 ntBASIC4.57□□□□□ -1.68
HLA-DQB1P01920 LYARP1-201ENST00000436977 1501 ntBASIC4.57□□□□□ -1.68
HLA-DQB1P01920 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HLA-DQB1P01920 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.57□□□□□ -1.68
HLA-DQB1P01920 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.57□□□□□ -1.68
HLA-DQB1P01920 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HLA-DQB1P01920 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HLA-DQB1P01920 NEPNP-201ENST00000404786 1371 ntBASIC4.57□□□□□ -1.68
HLA-DQB1P01920 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HLA-DQB1P01920 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HLA-DQB1P01920 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms