Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 AC006335.3-201ENST00000613408 292 ntBASIC6.13□□□□□ -1.43
SHISA3A0PJX4 XPNPEP3-206ENST00000614001 230 ntTSL 5 BASIC6.13□□□□□ -1.43
SHISA3A0PJX4 AC211486.5-201ENST00000616609 775 ntTSL 3 BASIC6.13□□□□□ -1.43
SHISA3A0PJX4 AC006338.1-201ENST00000618453 749 ntBASIC6.13□□□□□ -1.43
SHISA3A0PJX4 PPP3CB-AS1-214ENST00000620432 654 ntTSL 5 BASIC6.13□□□□□ -1.43
SHISA3A0PJX4 AL354702.2-202ENST00000641481 890 ntBASIC6.13□□□□□ -1.43
SHISA3A0PJX4 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC6.13□□□□□ -1.43
SHISA3A0PJX4 C15orf41-214ENST00000569302 1325 ntAPPRIS ALT1 TSL 5 BASIC6.13□□□□□ -1.43
SHISA3A0PJX4 CDC73-204ENST00000635846 3987 ntTSL 5 BASIC6.13□□□□□ -1.43
SHISA3A0PJX4 PARP9-202ENST00000462315 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
SHISA3A0PJX4 C1D-202ENST00000407324 1379 ntTSL 3 BASIC6.13□□□□□ -1.43
SHISA3A0PJX4 AC074198.1-201ENST00000506546 1397 ntBASIC6.13□□□□□ -1.43
SHISA3A0PJX4 EEF1A1P20-201ENST00000514852 1386 ntBASIC6.13□□□□□ -1.43
SHISA3A0PJX4 EEF1A1P22-201ENST00000559385 1380 ntBASIC6.13□□□□□ -1.43
SHISA3A0PJX4 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
SHISA3A0PJX4 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC6.13□□□□□ -1.43
SHISA3A0PJX4 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SHISA3A0PJX4 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SHISA3A0PJX4 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
SHISA3A0PJX4 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC6.13□□□□□ -1.43
SHISA3A0PJX4 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SHISA3A0PJX4 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SHISA3A0PJX4 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SHISA3A0PJX4 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SHISA3A0PJX4 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
SHISA3A0PJX4 AC013488.1-201ENST00000526618 1838 ntBASIC6.13□□□□□ -1.43
SHISA3A0PJX4 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC6.13□□□□□ -1.43
SHISA3A0PJX4 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
SHISA3A0PJX4 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
SHISA3A0PJX4 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC6.13□□□□□ -1.43
SHISA3A0PJX4 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC6.13□□□□□ -1.43
SHISA3A0PJX4 ZNF438-203ENST00000375311 2173 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
SHISA3A0PJX4 AC093278.2-201ENST00000564956 2485 ntBASIC6.13□□□□□ -1.43
SHISA3A0PJX4 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SHISA3A0PJX4 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC6.12□□□□□ -1.43
SHISA3A0PJX4 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SHISA3A0PJX4 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SHISA3A0PJX4 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC6.12□□□□□ -1.43
SHISA3A0PJX4 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
SHISA3A0PJX4 NBPF19-206ENST00000621744 14425 ntTSL 5 BASIC6.12□□□□□ -1.43
SHISA3A0PJX4 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SHISA3A0PJX4 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
SHISA3A0PJX4 OR10AD1-201ENST00000310248 1305 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
SHISA3A0PJX4 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
SHISA3A0PJX4 RPL24P4-201ENST00000326586 421 ntBASIC6.12□□□□□ -1.43
SHISA3A0PJX4 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC6.12□□□□□ -1.43
SHISA3A0PJX4 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SHISA3A0PJX4 Y_RNA.813-201ENST00000364639 102 ntBASIC6.12□□□□□ -1.43
SHISA3A0PJX4 RNU4-12P-201ENST00000365233 139 ntBASIC6.12□□□□□ -1.43
SHISA3A0PJX4 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
SHISA3A0PJX4 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SHISA3A0PJX4 SORBS1-207ENST00000371239 2436 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
SHISA3A0PJX4 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC6.12□□□□□ -1.43
SHISA3A0PJX4 MIR217-201ENST00000384817 110 ntBASIC6.12□□□□□ -1.43
SHISA3A0PJX4 IGLV5-52-201ENST00000390289 379 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
SHISA3A0PJX4 TRBV9-201ENST00000390363 390 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
SHISA3A0PJX4 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
SHISA3A0PJX4 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC6.12□□□□□ -1.43
SHISA3A0PJX4 SRSF7-202ENST00000409276 1050 ntTSL 5 BASIC6.12□□□□□ -1.43
SHISA3A0PJX4 RNU2-42P-201ENST00000410697 113 ntBASIC6.12□□□□□ -1.43
SHISA3A0PJX4 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC6.12□□□□□ -1.43
SHISA3A0PJX4 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SHISA3A0PJX4 CTSLP8-201ENST00000413075 967 ntBASIC6.12□□□□□ -1.43
SHISA3A0PJX4 CBX1P3-201ENST00000413296 527 ntBASIC6.12□□□□□ -1.43
SHISA3A0PJX4 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC6.12□□□□□ -1.43
SHISA3A0PJX4 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC6.12□□□□□ -1.43
SHISA3A0PJX4 RWDD4P2-201ENST00000426392 563 ntBASIC6.12□□□□□ -1.43
SHISA3A0PJX4 AL512649.1-201ENST00000428997 581 ntBASIC6.12□□□□□ -1.43
SHISA3A0PJX4 PPIAP17-201ENST00000438507 471 ntBASIC6.12□□□□□ -1.43
SHISA3A0PJX4 AC092427.1-201ENST00000439177 601 ntBASIC6.12□□□□□ -1.43
SHISA3A0PJX4 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC6.12□□□□□ -1.43
SHISA3A0PJX4 AC244021.2-201ENST00000445260 529 ntTSL 5 BASIC6.12□□□□□ -1.43
SHISA3A0PJX4 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SHISA3A0PJX4 RPL30P9-201ENST00000465586 330 ntBASIC6.12□□□□□ -1.43
SHISA3A0PJX4 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC6.12□□□□□ -1.43
SHISA3A0PJX4 MTND6P6-201ENST00000478031 263 ntBASIC6.12□□□□□ -1.43
SHISA3A0PJX4 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC6.12□□□□□ -1.43
SHISA3A0PJX4 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC6.12□□□□□ -1.43
SHISA3A0PJX4 AC006070.1-201ENST00000508151 193 ntBASIC6.12□□□□□ -1.43
SHISA3A0PJX4 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SHISA3A0PJX4 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC6.12□□□□□ -1.43
SHISA3A0PJX4 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC6.12□□□□□ -1.43
SHISA3A0PJX4 IGLV1-62-201ENST00000518003 441 ntBASIC6.12□□□□□ -1.43
SHISA3A0PJX4 AP005902.2-201ENST00000518393 307 ntBASIC6.12□□□□□ -1.43
SHISA3A0PJX4 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC6.12□□□□□ -1.43
SHISA3A0PJX4 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC6.12□□□□□ -1.43
SHISA3A0PJX4 IGHVIII-26-1-201ENST00000520387 250 ntBASIC6.12□□□□□ -1.43
SHISA3A0PJX4 AP003385.2-201ENST00000524910 973 ntBASIC6.12□□□□□ -1.43
SHISA3A0PJX4 DACT3-AS1-202ENST00000525008 496 ntTSL 2 BASIC6.12□□□□□ -1.43
SHISA3A0PJX4 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC6.12□□□□□ -1.43
SHISA3A0PJX4 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC6.12□□□□□ -1.43
SHISA3A0PJX4 GSTM3-206ENST00000540225 678 ntTSL 5 BASIC6.12□□□□□ -1.43
SHISA3A0PJX4 CR383656.6-201ENST00000550518 394 ntBASIC6.12□□□□□ -1.43
SHISA3A0PJX4 LINC02413-202ENST00000552353 898 ntTSL 5 BASIC6.12□□□□□ -1.43
SHISA3A0PJX4 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC6.12□□□□□ -1.43
SHISA3A0PJX4 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC6.12□□□□□ -1.43
SHISA3A0PJX4 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC6.12□□□□□ -1.43
SHISA3A0PJX4 AC006960.3-201ENST00000561845 705 ntBASIC6.12□□□□□ -1.43
SHISA3A0PJX4 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC6.12□□□□□ -1.43
SHISA3A0PJX4 RN7SL376P-201ENST00000578594 264 ntBASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 127.3 ms