Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 AP006245.2-201ENST00000522004 300 ntBASIC5.01□□□□□ -1.61
TRAPPC4Q9Y296 OR5AM1P-201ENST00000532136 1032 ntBASIC5.01□□□□□ -1.61
TRAPPC4Q9Y296 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.01□□□□□ -1.61
TRAPPC4Q9Y296 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.01□□□□□ -1.61
TRAPPC4Q9Y296 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.01□□□□□ -1.61
TRAPPC4Q9Y296 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.01□□□□□ -1.61
TRAPPC4Q9Y296 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.01□□□□□ -1.61
TRAPPC4Q9Y296 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TRAPPC4Q9Y296 MIR3614-201ENST00000581261 86 ntBASIC5.01□□□□□ -1.61
TRAPPC4Q9Y296 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.01□□□□□ -1.61
TRAPPC4Q9Y296 AC008521.2-201ENST00000591021 259 ntBASIC5.01□□□□□ -1.61
TRAPPC4Q9Y296 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.01□□□□□ -1.61
TRAPPC4Q9Y296 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.01□□□□□ -1.61
TRAPPC4Q9Y296 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.01□□□□□ -1.61
TRAPPC4Q9Y296 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.01□□□□□ -1.61
TRAPPC4Q9Y296 AP001962.1-201ENST00000624114 559 ntBASIC5.01□□□□□ -1.61
TRAPPC4Q9Y296 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.01□□□□□ -1.61
TRAPPC4Q9Y296 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.01□□□□□ -1.61
TRAPPC4Q9Y296 AL731532.2-201ENST00000623542 1953 ntBASIC5.01□□□□□ -1.61
TRAPPC4Q9Y296 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TRAPPC4Q9Y296 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TRAPPC4Q9Y296 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TRAPPC4Q9Y296 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.01□□□□□ -1.61
TRAPPC4Q9Y296 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TRAPPC4Q9Y296 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.01□□□□□ -1.61
TRAPPC4Q9Y296 TRIM51GP-201ENST00000534741 1350 ntBASIC5.01□□□□□ -1.61
TRAPPC4Q9Y296 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TRAPPC4Q9Y296 AC097063.1-201ENST00000426714 1797 ntBASIC5.01□□□□□ -1.61
TRAPPC4Q9Y296 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TRAPPC4Q9Y296 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TRAPPC4Q9Y296 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5□□□□□ -1.61
TRAPPC4Q9Y296 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
TRAPPC4Q9Y296 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5□□□□□ -1.61
TRAPPC4Q9Y296 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
TRAPPC4Q9Y296 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
TRAPPC4Q9Y296 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5□□□□□ -1.61
TRAPPC4Q9Y296 AC027279.1-201ENST00000568885 4284 ntBASIC5□□□□□ -1.61
TRAPPC4Q9Y296 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5□□□□□ -1.61
TRAPPC4Q9Y296 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5□□□□□ -1.61
TRAPPC4Q9Y296 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
TRAPPC4Q9Y296 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
TRAPPC4Q9Y296 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
TRAPPC4Q9Y296 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5□□□□□ -1.61
TRAPPC4Q9Y296 RNU4-2-201ENST00000365668 141 ntBASIC5□□□□□ -1.61
TRAPPC4Q9Y296 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5□□□□□ -1.61
TRAPPC4Q9Y296 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
TRAPPC4Q9Y296 RN7SKP293-201ENST00000411389 296 ntBASIC5□□□□□ -1.61
TRAPPC4Q9Y296 AL596448.1-201ENST00000415024 392 ntBASIC5□□□□□ -1.61
TRAPPC4Q9Y296 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5□□□□□ -1.61
TRAPPC4Q9Y296 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5□□□□□ -1.61
TRAPPC4Q9Y296 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC5□□□□□ -1.61
TRAPPC4Q9Y296 RPL12P11-201ENST00000439970 501 ntBASIC5□□□□□ -1.61
TRAPPC4Q9Y296 AC073465.2-201ENST00000440938 498 ntBASIC5□□□□□ -1.61
TRAPPC4Q9Y296 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5□□□□□ -1.61
TRAPPC4Q9Y296 AP000547.1-201ENST00000454360 617 ntBASIC5□□□□□ -1.61
TRAPPC4Q9Y296 AZGP1P2-201ENST00000454506 345 ntBASIC5□□□□□ -1.61
TRAPPC4Q9Y296 AC117394.1-201ENST00000477323 567 ntBASIC5□□□□□ -1.61
TRAPPC4Q9Y296 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5□□□□□ -1.61
TRAPPC4Q9Y296 AC074087.1-201ENST00000512059 724 ntBASIC5□□□□□ -1.61
TRAPPC4Q9Y296 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5□□□□□ -1.61
TRAPPC4Q9Y296 AC112191.2-201ENST00000522428 333 ntBASIC5□□□□□ -1.61
TRAPPC4Q9Y296 AC027369.5-201ENST00000533838 755 ntBASIC5□□□□□ -1.61
TRAPPC4Q9Y296 MRPS21P7-201ENST00000566937 238 ntBASIC5□□□□□ -1.61
TRAPPC4Q9Y296 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5□□□□□ -1.61
TRAPPC4Q9Y296 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5□□□□□ -1.61
TRAPPC4Q9Y296 PPATP2-201ENST00000605635 508 ntBASIC5□□□□□ -1.61
TRAPPC4Q9Y296 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5□□□□□ -1.61
TRAPPC4Q9Y296 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5□□□□□ -1.61
TRAPPC4Q9Y296 AL078621.3-201ENST00000623707 2042 ntBASIC5□□□□□ -1.61
TRAPPC4Q9Y296 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5□□□□□ -1.61
TRAPPC4Q9Y296 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
TRAPPC4Q9Y296 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
TRAPPC4Q9Y296 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
TRAPPC4Q9Y296 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5□□□□□ -1.61
TRAPPC4Q9Y296 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
TRAPPC4Q9Y296 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5□□□□□ -1.61
TRAPPC4Q9Y296 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
TRAPPC4Q9Y296 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5□□□□□ -1.61
TRAPPC4Q9Y296 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
TRAPPC4Q9Y296 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
TRAPPC4Q9Y296 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
TRAPPC4Q9Y296 ZNF652P1-201ENST00000442420 1309 ntBASIC4.99□□□□□ -1.61
TRAPPC4Q9Y296 ATP5A1P1-201ENST00000454088 1321 ntBASIC4.99□□□□□ -1.61
TRAPPC4Q9Y296 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
TRAPPC4Q9Y296 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
TRAPPC4Q9Y296 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC4.99□□□□□ -1.61
TRAPPC4Q9Y296 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
TRAPPC4Q9Y296 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
TRAPPC4Q9Y296 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.99□□□□□ -1.61
TRAPPC4Q9Y296 AC114947.2-201ENST00000565748 2125 ntBASIC4.99□□□□□ -1.61
TRAPPC4Q9Y296 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
TRAPPC4Q9Y296 AC007618.1-201ENST00000366455 732 ntBASIC4.99□□□□□ -1.61
TRAPPC4Q9Y296 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC4.99□□□□□ -1.61
TRAPPC4Q9Y296 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
TRAPPC4Q9Y296 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC4.99□□□□□ -1.61
TRAPPC4Q9Y296 RN7SKP286-201ENST00000410894 299 ntBASIC4.99□□□□□ -1.61
TRAPPC4Q9Y296 TNPO1P1-201ENST00000423641 1138 ntBASIC4.99□□□□□ -1.61
TRAPPC4Q9Y296 AC104843.2-201ENST00000427666 297 ntBASIC4.99□□□□□ -1.61
TRAPPC4Q9Y296 RPL7P56-201ENST00000429441 717 ntBASIC4.99□□□□□ -1.61
TRAPPC4Q9Y296 RPL7AP49-201ENST00000429522 581 ntBASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms