Protein–RNA interactions for Protein: Q9UPZ3

HPS5, Hermansky-Pudlak syndrome 5 protein, humanhuman

Predictions only

Length 1,129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5Q9UPZ3 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
HPS5Q9UPZ3 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
HPS5Q9UPZ3 LINC01603-202ENST00000519557 712 ntTSL 3 BASIC8.74□□□□□ -1.01
HPS5Q9UPZ3 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC8.74□□□□□ -1.01
HPS5Q9UPZ3 ASB8-207ENST00000536953 923 ntTSL 2 BASIC8.74□□□□□ -1.01
HPS5Q9UPZ3 AC011595.1-201ENST00000548901 753 ntTSL 3 BASIC8.74□□□□□ -1.01
HPS5Q9UPZ3 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC8.74□□□□□ -1.01
HPS5Q9UPZ3 AC024267.2-201ENST00000582737 417 ntBASIC8.74□□□□□ -1.01
HPS5Q9UPZ3 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC8.74□□□□□ -1.01
HPS5Q9UPZ3 AC011712.1-201ENST00000588959 234 ntBASIC8.74□□□□□ -1.01
HPS5Q9UPZ3 AC022916.3-201ENST00000592961 742 ntBASIC8.74□□□□□ -1.01
HPS5Q9UPZ3 AC011500.1-201ENST00000601963 469 ntBASIC8.74□□□□□ -1.01
HPS5Q9UPZ3 CR382285.1-202ENST00000604687 547 ntBASIC8.74□□□□□ -1.01
HPS5Q9UPZ3 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC8.74□□□□□ -1.01
HPS5Q9UPZ3 MIR1302-1-201ENST00000637932 143 ntBASIC8.74□□□□□ -1.01
HPS5Q9UPZ3 CXCR4-202ENST00000409817 1895 ntAPPRIS P3 BASIC8.74□□□□□ -1.01
HPS5Q9UPZ3 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC8.74□□□□□ -1.01
HPS5Q9UPZ3 FAM19A2-211ENST00000550003 2499 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
HPS5Q9UPZ3 ARMC8-210ENST00000469044 4790 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
HPS5Q9UPZ3 FRMD7-203ENST00000464296 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
HPS5Q9UPZ3 IL16-204ENST00000394660 9616 ntAPPRIS ALT2 TSL 2 BASIC8.73□□□□□ -1.01
HPS5Q9UPZ3 AC017007.4-201ENST00000503353 1352 ntBASIC8.73□□□□□ -1.01
HPS5Q9UPZ3 EEF1A1P9-201ENST00000514975 1383 ntBASIC8.73□□□□□ -1.01
HPS5Q9UPZ3 OR51E2-201ENST00000396950 2781 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
HPS5Q9UPZ3 FIGNL1-213ENST00000615084 3368 ntAPPRIS P1 TSL 3 BASIC8.73□□□□□ -1.01
HPS5Q9UPZ3 ESRP1-201ENST00000358397 3756 ntAPPRIS ALT1 TSL 1 (best) BASIC8.73□□□□□ -1.01
HPS5Q9UPZ3 ZNF880-202ENST00000422689 2230 ntAPPRIS P1 TSL 2 BASIC8.73□□□□□ -1.01
HPS5Q9UPZ3 OR7E25P-202ENST00000641088 5937 ntBASIC8.73□□□□□ -1.01
HPS5Q9UPZ3 PAH-201ENST00000307000 2466 ntTSL 5 BASIC8.73□□□□□ -1.01
HPS5Q9UPZ3 ZNF410-205ENST00000442160 2076 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
HPS5Q9UPZ3 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
HPS5Q9UPZ3 FCAR-204ENST00000359272 828 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
HPS5Q9UPZ3 RNU6-697P-201ENST00000363348 107 ntBASIC8.73□□□□□ -1.01
HPS5Q9UPZ3 Y_RNA.166-201ENST00000363730 102 ntBASIC8.73□□□□□ -1.01
HPS5Q9UPZ3 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC8.73□□□□□ -1.01
HPS5Q9UPZ3 RNU6-1105P-201ENST00000384774 107 ntBASIC8.73□□□□□ -1.01
HPS5Q9UPZ3 SNRPEP2-201ENST00000397592 279 ntBASIC8.73□□□□□ -1.01
HPS5Q9UPZ3 CYCSP45-201ENST00000402289 315 ntBASIC8.73□□□□□ -1.01
HPS5Q9UPZ3 MIR1266-201ENST00000408125 84 ntBASIC8.73□□□□□ -1.01
HPS5Q9UPZ3 AL691515.2-201ENST00000414765 466 ntTSL 3 BASIC8.73□□□□□ -1.01
HPS5Q9UPZ3 AC016769.2-201ENST00000414815 475 ntBASIC8.73□□□□□ -1.01
HPS5Q9UPZ3 FCF1P2-201ENST00000415284 583 ntBASIC8.73□□□□□ -1.01
HPS5Q9UPZ3 RPS7P15-201ENST00000415804 584 ntBASIC8.73□□□□□ -1.01
HPS5Q9UPZ3 AC016716.2-201ENST00000418621 486 ntTSL 3 BASIC8.73□□□□□ -1.01
HPS5Q9UPZ3 AL672212.1-201ENST00000422246 400 ntBASIC8.73□□□□□ -1.01
HPS5Q9UPZ3 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC8.73□□□□□ -1.01
HPS5Q9UPZ3 NPM1P18-201ENST00000434232 732 ntBASIC8.73□□□□□ -1.01
HPS5Q9UPZ3 SDCBPP1-201ENST00000440192 890 ntBASIC8.73□□□□□ -1.01
HPS5Q9UPZ3 AL031681.1-201ENST00000443304 400 ntBASIC8.73□□□□□ -1.01
HPS5Q9UPZ3 SS18L2P1-201ENST00000445923 213 ntBASIC8.73□□□□□ -1.01
HPS5Q9UPZ3 AL138930.1-201ENST00000446952 635 ntTSL 3 BASIC8.73□□□□□ -1.01
HPS5Q9UPZ3 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC8.73□□□□□ -1.01
HPS5Q9UPZ3 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC8.73□□□□□ -1.01
HPS5Q9UPZ3 RN7SL233P-201ENST00000469988 277 ntBASIC8.73□□□□□ -1.01
HPS5Q9UPZ3 AC087312.1-201ENST00000471411 480 ntBASIC8.73□□□□□ -1.01
HPS5Q9UPZ3 AC117473.1-201ENST00000508616 392 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
HPS5Q9UPZ3 ATG10-208ENST00000513634 618 ntTSL 2 BASIC8.73□□□□□ -1.01
HPS5Q9UPZ3 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC8.73□□□□□ -1.01
HPS5Q9UPZ3 Vault.2-201ENST00000516519 98 ntBASIC8.73□□□□□ -1.01
HPS5Q9UPZ3 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC8.73□□□□□ -1.01
HPS5Q9UPZ3 IGKV2-29-201ENST00000521304 372 ntBASIC8.73□□□□□ -1.01
HPS5Q9UPZ3 HSPA8P13-201ENST00000523715 472 ntBASIC8.73□□□□□ -1.01
HPS5Q9UPZ3 ELOCP31-201ENST00000540463 467 ntBASIC8.73□□□□□ -1.01
HPS5Q9UPZ3 AC008147.3-201ENST00000548666 354 ntBASIC8.73□□□□□ -1.01
HPS5Q9UPZ3 AC011611.1-201ENST00000552179 197 ntBASIC8.73□□□□□ -1.01
HPS5Q9UPZ3 TIMM9-205ENST00000555404 430 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
HPS5Q9UPZ3 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC8.73□□□□□ -1.01
HPS5Q9UPZ3 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC8.73□□□□□ -1.01
HPS5Q9UPZ3 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC8.73□□□□□ -1.01
HPS5Q9UPZ3 AC004494.1-202ENST00000573820 480 ntTSL 4 BASIC8.73□□□□□ -1.01
HPS5Q9UPZ3 AC007687.1-201ENST00000602704 304 ntBASIC8.73□□□□□ -1.01
HPS5Q9UPZ3 AC053481.5-201ENST00000602932 397 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
HPS5Q9UPZ3 AL139089.1-201ENST00000620372 975 ntBASIC8.73□□□□□ -1.01
HPS5Q9UPZ3 AC006504.8-201ENST00000621046 635 ntBASIC8.73□□□□□ -1.01
HPS5Q9UPZ3 AC007342.8-201ENST00000623278 678 ntBASIC8.73□□□□□ -1.01
HPS5Q9UPZ3 JAML-213ENST00000640745 951 ntTSL 5 BASIC8.73□□□□□ -1.01
HPS5Q9UPZ3 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
HPS5Q9UPZ3 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
HPS5Q9UPZ3 DHX32-202ENST00000368721 2389 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
HPS5Q9UPZ3 OR5AU1-202ENST00000641039 8232 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
HPS5Q9UPZ3 CEACAM5-210ENST00000617332 2228 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
HPS5Q9UPZ3 MAVS-201ENST00000416600 11596 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
HPS5Q9UPZ3 CD86-209ENST00000493101 1572 ntTSL 2 BASIC8.73□□□□□ -1.01
HPS5Q9UPZ3 CYFIP2-221ENST00000618329 4256 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
HPS5Q9UPZ3 CCAR1-218ENST00000630771 4540 ntTSL 5 BASIC8.73□□□□□ -1.01
HPS5Q9UPZ3 LDB3-201ENST00000263066 3873 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
HPS5Q9UPZ3 MEF2A-201ENST00000338042 5464 ntAPPRIS ALT1 TSL 2 BASIC8.73□□□□□ -1.01
HPS5Q9UPZ3 IPO9-201ENST00000361565 11435 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
HPS5Q9UPZ3 EEF1A1P26-201ENST00000458319 1363 ntBASIC8.73□□□□□ -1.01
HPS5Q9UPZ3 HERC4-202ENST00000373700 3905 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
HPS5Q9UPZ3 HKR1-203ENST00000541583 2758 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
HPS5Q9UPZ3 FAM13C-216ENST00000618427 3458 ntAPPRIS ALT2 TSL 2 BASIC8.73□□□□□ -1.01
HPS5Q9UPZ3 KDM4C-205ENST00000428870 3039 ntTSL 2 BASIC8.72□□□□□ -1.01
HPS5Q9UPZ3 C1GALT1-201ENST00000223122 6078 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
HPS5Q9UPZ3 NUMB-223ENST00000556772 5172 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
HPS5Q9UPZ3 AMPD1-201ENST00000369538 2392 ntAPPRIS ALT2 TSL 2 BASIC8.72□□□□□ -1.01
HPS5Q9UPZ3 ZHX3-218ENST00000560364 4283 ntTSL 5 BASIC8.72□□□□□ -1.01
HPS5Q9UPZ3 KLHL32-207ENST00000620278 2642 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
HPS5Q9UPZ3 NT5DC1-201ENST00000319550 6923 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
HPS5Q9UPZ3 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms