Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
PDZRN3Q9UPQ7 AC021678.1-201ENST00000505195 936 ntBASIC8.91□□□□□ -0.98
PDZRN3Q9UPQ7 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
PDZRN3Q9UPQ7 NAF1-205ENST00000509434 385 ntTSL 3 BASIC8.91□□□□□ -0.98
PDZRN3Q9UPQ7 PGAM4P2-201ENST00000512491 721 ntBASIC8.91□□□□□ -0.98
PDZRN3Q9UPQ7 AC017037.2-201ENST00000513850 890 ntBASIC8.91□□□□□ -0.98
PDZRN3Q9UPQ7 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC8.91□□□□□ -0.98
PDZRN3Q9UPQ7 AC093878.1-201ENST00000515630 432 ntBASIC8.91□□□□□ -0.98
PDZRN3Q9UPQ7 RNU6-314P-201ENST00000516574 104 ntBASIC8.91□□□□□ -0.98
PDZRN3Q9UPQ7 CASC11-203ENST00000519071 791 ntTSL 3 BASIC8.91□□□□□ -0.98
PDZRN3Q9UPQ7 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC8.91□□□□□ -0.98
PDZRN3Q9UPQ7 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC8.91□□□□□ -0.98
PDZRN3Q9UPQ7 AC012464.1-201ENST00000550687 540 ntTSL 4 BASIC8.91□□□□□ -0.98
PDZRN3Q9UPQ7 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC8.91□□□□□ -0.98
PDZRN3Q9UPQ7 AC087465.1-201ENST00000560574 245 ntBASIC8.91□□□□□ -0.98
PDZRN3Q9UPQ7 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC8.91□□□□□ -0.98
PDZRN3Q9UPQ7 AC124283.4-201ENST00000581815 456 ntBASIC8.91□□□□□ -0.98
PDZRN3Q9UPQ7 MIR4795-201ENST00000584182 89 ntBASIC8.91□□□□□ -0.98
PDZRN3Q9UPQ7 BNIP3P22-201ENST00000593399 556 ntBASIC8.91□□□□□ -0.98
PDZRN3Q9UPQ7 AL138478.1-201ENST00000612252 832 ntBASIC8.91□□□□□ -0.98
PDZRN3Q9UPQ7 MIR1264-201ENST00000616374 69 ntBASIC8.91□□□□□ -0.98
PDZRN3Q9UPQ7 AC025016.1-201ENST00000616746 682 ntBASIC8.91□□□□□ -0.98
PDZRN3Q9UPQ7 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC8.91□□□□□ -0.98
PDZRN3Q9UPQ7 MIR6823-201ENST00000622118 61 ntBASIC8.91□□□□□ -0.98
PDZRN3Q9UPQ7 AL359757.1-201ENST00000623176 255 ntBASIC8.91□□□□□ -0.98
PDZRN3Q9UPQ7 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC8.91□□□□□ -0.98
PDZRN3Q9UPQ7 AL139254.2-202ENST00000641937 1156 ntBASIC8.91□□□□□ -0.98
PDZRN3Q9UPQ7 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC8.91□□□□□ -0.98
PDZRN3Q9UPQ7 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
PDZRN3Q9UPQ7 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC8.91□□□□□ -0.98
PDZRN3Q9UPQ7 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
PDZRN3Q9UPQ7 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC8.91□□□□□ -0.98
PDZRN3Q9UPQ7 PPP1R12B-216ENST00000608999 15248 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
PDZRN3Q9UPQ7 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
PDZRN3Q9UPQ7 ALG13-224ENST00000610588 4175 ntTSL 2 BASIC8.91□□□□□ -0.98
PDZRN3Q9UPQ7 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
PDZRN3Q9UPQ7 FAM186A-203ENST00000543096 2116 ntAPPRIS ALT2 TSL 2 BASIC8.9□□□□□ -0.98
PDZRN3Q9UPQ7 AL356361.1-201ENST00000400943 1459 ntBASIC8.9□□□□□ -0.98
PDZRN3Q9UPQ7 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
PDZRN3Q9UPQ7 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
PDZRN3Q9UPQ7 RNU6-1122P-201ENST00000384449 107 ntBASIC8.9□□□□□ -0.98
PDZRN3Q9UPQ7 Y_RNA.529-201ENST00000384586 119 ntBASIC8.9□□□□□ -0.98
PDZRN3Q9UPQ7 AL590762.1-201ENST00000391782 432 ntBASIC8.9□□□□□ -0.98
PDZRN3Q9UPQ7 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC8.9□□□□□ -0.98
PDZRN3Q9UPQ7 USP9YP36-201ENST00000424581 829 ntBASIC8.9□□□□□ -0.98
PDZRN3Q9UPQ7 MYL6P3-201ENST00000436904 432 ntBASIC8.9□□□□□ -0.98
PDZRN3Q9UPQ7 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC8.9□□□□□ -0.98
PDZRN3Q9UPQ7 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC8.9□□□□□ -0.98
PDZRN3Q9UPQ7 Z98949.2-201ENST00000440996 144 ntBASIC8.9□□□□□ -0.98
PDZRN3Q9UPQ7 GDI2P2-201ENST00000445131 608 ntBASIC8.9□□□□□ -0.98
PDZRN3Q9UPQ7 PAXBP1P1-201ENST00000449315 447 ntBASIC8.9□□□□□ -0.98
PDZRN3Q9UPQ7 VNN3-210ENST00000450865 596 ntTSL 4 BASIC8.9□□□□□ -0.98
PDZRN3Q9UPQ7 RFC5P1-201ENST00000454419 874 ntBASIC8.9□□□□□ -0.98
PDZRN3Q9UPQ7 AL162395.1-201ENST00000457882 422 ntBASIC8.9□□□□□ -0.98
PDZRN3Q9UPQ7 CTSLP6-201ENST00000458273 1002 ntBASIC8.9□□□□□ -0.98
PDZRN3Q9UPQ7 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC8.9□□□□□ -0.98
PDZRN3Q9UPQ7 RPS4XP23-201ENST00000487801 237 ntBASIC8.9□□□□□ -0.98
PDZRN3Q9UPQ7 RNF138P1-201ENST00000502765 546 ntBASIC8.9□□□□□ -0.98
PDZRN3Q9UPQ7 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC8.9□□□□□ -0.98
PDZRN3Q9UPQ7 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC8.9□□□□□ -0.98
PDZRN3Q9UPQ7 AC122718.2-201ENST00000505325 591 ntBASIC8.9□□□□□ -0.98
PDZRN3Q9UPQ7 AC093824.1-201ENST00000508796 343 ntBASIC8.9□□□□□ -0.98
PDZRN3Q9UPQ7 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC8.9□□□□□ -0.98
PDZRN3Q9UPQ7 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC8.9□□□□□ -0.98
PDZRN3Q9UPQ7 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC8.9□□□□□ -0.98
PDZRN3Q9UPQ7 GLYATL1P4-201ENST00000529326 906 ntBASIC8.9□□□□□ -0.98
PDZRN3Q9UPQ7 FCF1-203ENST00000553615 954 ntTSL 3 BASIC8.9□□□□□ -0.98
PDZRN3Q9UPQ7 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC8.9□□□□□ -0.98
PDZRN3Q9UPQ7 MIR378C-201ENST00000578683 81 ntBASIC8.9□□□□□ -0.98
PDZRN3Q9UPQ7 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
PDZRN3Q9UPQ7 MIR4503-201ENST00000582187 83 ntBASIC8.9□□□□□ -0.98
PDZRN3Q9UPQ7 MIR212-201ENST00000586026 110 ntBASIC8.9□□□□□ -0.98
PDZRN3Q9UPQ7 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
PDZRN3Q9UPQ7 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC8.9□□□□□ -0.98
PDZRN3Q9UPQ7 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC8.9□□□□□ -0.98
PDZRN3Q9UPQ7 AL390877.1-201ENST00000605704 214 ntBASIC8.9□□□□□ -0.98
PDZRN3Q9UPQ7 AC016877.3-201ENST00000606778 504 ntBASIC8.9□□□□□ -0.98
PDZRN3Q9UPQ7 AC104184.1-201ENST00000607513 721 ntBASIC8.9□□□□□ -0.98
PDZRN3Q9UPQ7 AL365434.2-201ENST00000607979 234 ntBASIC8.9□□□□□ -0.98
PDZRN3Q9UPQ7 AC019193.3-201ENST00000609144 554 ntBASIC8.9□□□□□ -0.98
PDZRN3Q9UPQ7 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
PDZRN3Q9UPQ7 AC009033.1-201ENST00000624279 431 ntBASIC8.9□□□□□ -0.98
PDZRN3Q9UPQ7 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC8.9□□□□□ -0.98
PDZRN3Q9UPQ7 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC8.9□□□□□ -0.98
PDZRN3Q9UPQ7 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC8.9□□□□□ -0.98
PDZRN3Q9UPQ7 AL358394.2-201ENST00000427229 3637 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
PDZRN3Q9UPQ7 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC8.9□□□□□ -0.98
PDZRN3Q9UPQ7 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
PDZRN3Q9UPQ7 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
PDZRN3Q9UPQ7 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
PDZRN3Q9UPQ7 EPS15P1-202ENST00000459691 2071 ntBASIC8.9□□□□□ -0.99
PDZRN3Q9UPQ7 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC8.9□□□□□ -0.99
PDZRN3Q9UPQ7 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC8.9□□□□□ -0.99
PDZRN3Q9UPQ7 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC8.9□□□□□ -0.99
PDZRN3Q9UPQ7 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
PDZRN3Q9UPQ7 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC8.9□□□□□ -0.99
PDZRN3Q9UPQ7 OR51M1-203ENST00000642046 4092 ntAPPRIS P1 BASIC8.9□□□□□ -0.99
PDZRN3Q9UPQ7 OSBPL1A-202ENST00000357041 1869 ntTSL 2 BASIC8.89□□□□□ -0.99
PDZRN3Q9UPQ7 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
PDZRN3Q9UPQ7 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC8.89□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms