Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC8.24□□□□□ -1.09
RIMBP3Q9UFD9 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
RIMBP3Q9UFD9 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
RIMBP3Q9UFD9 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC8.24□□□□□ -1.09
RIMBP3Q9UFD9 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC8.24□□□□□ -1.09
RIMBP3Q9UFD9 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC8.24□□□□□ -1.09
RIMBP3Q9UFD9 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
RIMBP3Q9UFD9 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
RIMBP3Q9UFD9 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
RIMBP3Q9UFD9 MALAT1-202ENST00000534336 8708 ntBASIC8.24□□□□□ -1.09
RIMBP3Q9UFD9 PAPPA-AS1-201ENST00000445861 2450 ntBASIC8.24□□□□□ -1.09
RIMBP3Q9UFD9 AP000866.6-201ENST00000638898 3579 ntBASIC8.24□□□□□ -1.09
RIMBP3Q9UFD9 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC8.24□□□□□ -1.09
RIMBP3Q9UFD9 PTPRT-205ENST00000373193 12681 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
RIMBP3Q9UFD9 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
RIMBP3Q9UFD9 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
RIMBP3Q9UFD9 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
RIMBP3Q9UFD9 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
RIMBP3Q9UFD9 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC8.24□□□□□ -1.09
RIMBP3Q9UFD9 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
RIMBP3Q9UFD9 AMZ2P2-201ENST00000406819 1057 ntBASIC8.24□□□□□ -1.09
RIMBP3Q9UFD9 RCC2P2-201ENST00000422174 918 ntBASIC8.24□□□□□ -1.09
RIMBP3Q9UFD9 RPS12P10-201ENST00000427031 377 ntBASIC8.24□□□□□ -1.09
RIMBP3Q9UFD9 PHBP16-201ENST00000446318 950 ntBASIC8.24□□□□□ -1.09
RIMBP3Q9UFD9 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC8.24□□□□□ -1.09
RIMBP3Q9UFD9 RPL7L1P8-201ENST00000469911 741 ntBASIC8.24□□□□□ -1.09
RIMBP3Q9UFD9 AC024451.1-201ENST00000508013 779 ntBASIC8.24□□□□□ -1.09
RIMBP3Q9UFD9 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC8.24□□□□□ -1.09
RIMBP3Q9UFD9 AC005377.1-201ENST00000605126 456 ntBASIC8.24□□□□□ -1.09
RIMBP3Q9UFD9 AL138960.1-201ENST00000613838 513 ntBASIC8.24□□□□□ -1.09
RIMBP3Q9UFD9 AL445567.2-201ENST00000618935 498 ntBASIC8.24□□□□□ -1.09
RIMBP3Q9UFD9 RNA5SP196-201ENST00000625967 102 ntBASIC8.24□□□□□ -1.09
RIMBP3Q9UFD9 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
RIMBP3Q9UFD9 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC8.24□□□□□ -1.09
RIMBP3Q9UFD9 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
RIMBP3Q9UFD9 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
RIMBP3Q9UFD9 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
RIMBP3Q9UFD9 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
RIMBP3Q9UFD9 EFCAB6-203ENST00000396231 4424 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
RIMBP3Q9UFD9 CNOT7-201ENST00000361272 6913 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
RIMBP3Q9UFD9 IARS-213ENST00000627121 4587 ntTSL 5 BASIC8.23□□□□□ -1.09
RIMBP3Q9UFD9 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
RIMBP3Q9UFD9 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
RIMBP3Q9UFD9 KIAA1217-204ENST00000376454 7381 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
RIMBP3Q9UFD9 MAPK10-349ENST00000641767 3661 ntBASIC8.23□□□□□ -1.09
RIMBP3Q9UFD9 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC8.23□□□□□ -1.09
RIMBP3Q9UFD9 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC8.23□□□□□ -1.09
RIMBP3Q9UFD9 GALK2-201ENST00000327171 5299 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
RIMBP3Q9UFD9 SNORA9-201ENST00000384215 133 ntBASIC8.23□□□□□ -1.09
RIMBP3Q9UFD9 AC016027.5-201ENST00000427227 210 ntBASIC8.23□□□□□ -1.09
RIMBP3Q9UFD9 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC8.23□□□□□ -1.09
RIMBP3Q9UFD9 AC012400.1-201ENST00000518452 381 ntBASIC8.23□□□□□ -1.09
RIMBP3Q9UFD9 OR5AM1P-201ENST00000532136 1032 ntBASIC8.23□□□□□ -1.09
RIMBP3Q9UFD9 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC8.23□□□□□ -1.09
RIMBP3Q9UFD9 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC8.23□□□□□ -1.09
RIMBP3Q9UFD9 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC8.23□□□□□ -1.09
RIMBP3Q9UFD9 KCNMA1-273ENST00000639913 12071 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
RIMBP3Q9UFD9 FARP1-219ENST00000596580 13532 ntTSL 5 BASIC8.23□□□□□ -1.09
RIMBP3Q9UFD9 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
RIMBP3Q9UFD9 RIF1-205ENST00000444746 7897 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
RIMBP3Q9UFD9 AC005618.1-201ENST00000606901 3148 ntBASIC8.23□□□□□ -1.09
RIMBP3Q9UFD9 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC8.23□□□□□ -1.09
RIMBP3Q9UFD9 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
RIMBP3Q9UFD9 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
RIMBP3Q9UFD9 ABHD2-201ENST00000352732 8735 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
RIMBP3Q9UFD9 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC8.22□□□□□ -1.09
RIMBP3Q9UFD9 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
RIMBP3Q9UFD9 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
RIMBP3Q9UFD9 ZNFX1-204ENST00000396105 7371 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
RIMBP3Q9UFD9 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
RIMBP3Q9UFD9 ATP5F1P2-201ENST00000398143 760 ntBASIC8.22□□□□□ -1.09
RIMBP3Q9UFD9 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC8.22□□□□□ -1.09
RIMBP3Q9UFD9 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC8.22□□□□□ -1.09
RIMBP3Q9UFD9 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC8.22□□□□□ -1.09
RIMBP3Q9UFD9 RPL7P40-201ENST00000481703 745 ntBASIC8.22□□□□□ -1.09
RIMBP3Q9UFD9 ATP5LP5-201ENST00000483050 299 ntBASIC8.22□□□□□ -1.09
RIMBP3Q9UFD9 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC8.22□□□□□ -1.09
RIMBP3Q9UFD9 AC023632.4-201ENST00000517783 191 ntBASIC8.22□□□□□ -1.09
RIMBP3Q9UFD9 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC8.22□□□□□ -1.09
RIMBP3Q9UFD9 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC8.22□□□□□ -1.09
RIMBP3Q9UFD9 NMNAT1P1-201ENST00000554095 876 ntBASIC8.22□□□□□ -1.09
RIMBP3Q9UFD9 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC8.22□□□□□ -1.09
RIMBP3Q9UFD9 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC8.22□□□□□ -1.09
RIMBP3Q9UFD9 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
RIMBP3Q9UFD9 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC8.22□□□□□ -1.09
RIMBP3Q9UFD9 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
RIMBP3Q9UFD9 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
RIMBP3Q9UFD9 EIF3F-208ENST00000533626 7540 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
RIMBP3Q9UFD9 TTC28-208ENST00000612946 11274 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
RIMBP3Q9UFD9 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
RIMBP3Q9UFD9 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
RIMBP3Q9UFD9 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC8.22□□□□□ -1.09
RIMBP3Q9UFD9 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC8.22□□□□□ -1.09
RIMBP3Q9UFD9 SPTAN1-222ENST00000630804 7812 ntTSL 5 BASIC8.22□□□□□ -1.09
RIMBP3Q9UFD9 PGR-202ENST00000325455 13748 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
RIMBP3Q9UFD9 CBFA2T2-209ENST00000492345 7803 ntTSL 5 BASIC8.22□□□□□ -1.09
RIMBP3Q9UFD9 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
RIMBP3Q9UFD9 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
RIMBP3Q9UFD9 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC8.22□□□□□ -1.09
RIMBP3Q9UFD9 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms