Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 VBP1-203ENST00000535916 944 ntTSL 2 BASIC6.08□□□□□ -1.44
DKK3Q9UBP4 AC139697.1-201ENST00000548429 745 ntBASIC6.08□□□□□ -1.44
DKK3Q9UBP4 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC6.08□□□□□ -1.44
DKK3Q9UBP4 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC6.08□□□□□ -1.44
DKK3Q9UBP4 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC6.08□□□□□ -1.44
DKK3Q9UBP4 AC233266.2-201ENST00000567067 528 ntBASIC6.08□□□□□ -1.44
DKK3Q9UBP4 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC6.08□□□□□ -1.44
DKK3Q9UBP4 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC6.08□□□□□ -1.44
DKK3Q9UBP4 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC6.08□□□□□ -1.44
DKK3Q9UBP4 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC6.08□□□□□ -1.44
DKK3Q9UBP4 AC006272.2-201ENST00000594725 163 ntBASIC6.08□□□□□ -1.44
DKK3Q9UBP4 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC6.08□□□□□ -1.44
DKK3Q9UBP4 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC6.08□□□□□ -1.44
DKK3Q9UBP4 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC6.08□□□□□ -1.44
DKK3Q9UBP4 MIR6793-201ENST00000612376 63 ntBASIC6.08□□□□□ -1.44
DKK3Q9UBP4 AL137246.2-201ENST00000613439 662 ntBASIC6.08□□□□□ -1.44
DKK3Q9UBP4 AL122125.1-201ENST00000616999 600 ntBASIC6.08□□□□□ -1.44
DKK3Q9UBP4 MIR6886-201ENST00000619864 61 ntBASIC6.08□□□□□ -1.44
DKK3Q9UBP4 AC084824.4-201ENST00000620106 731 ntBASIC6.08□□□□□ -1.44
DKK3Q9UBP4 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
DKK3Q9UBP4 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
DKK3Q9UBP4 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
DKK3Q9UBP4 MTCO1P11-201ENST00000429111 1528 ntBASIC6.08□□□□□ -1.44
DKK3Q9UBP4 PSG10P-201ENST00000501199 1500 ntBASIC6.08□□□□□ -1.44
DKK3Q9UBP4 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC6.08□□□□□ -1.44
DKK3Q9UBP4 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
DKK3Q9UBP4 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
DKK3Q9UBP4 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC6.08□□□□□ -1.44
DKK3Q9UBP4 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC6.08□□□□□ -1.44
DKK3Q9UBP4 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
DKK3Q9UBP4 AP005432.1-201ENST00000580891 3485 ntBASIC6.08□□□□□ -1.44
DKK3Q9UBP4 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
DKK3Q9UBP4 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
DKK3Q9UBP4 MRRFP1-201ENST00000435941 1675 ntBASIC6.07□□□□□ -1.44
DKK3Q9UBP4 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
DKK3Q9UBP4 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.07□□□□□ -1.44
DKK3Q9UBP4 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.07□□□□□ -1.44
DKK3Q9UBP4 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
DKK3Q9UBP4 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
DKK3Q9UBP4 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC6.07□□□□□ -1.44
DKK3Q9UBP4 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
DKK3Q9UBP4 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC6.07□□□□□ -1.44
DKK3Q9UBP4 RNA5SP477-201ENST00000362639 119 ntBASIC6.07□□□□□ -1.44
DKK3Q9UBP4 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
DKK3Q9UBP4 ANAPC10P1-201ENST00000395991 556 ntBASIC6.07□□□□□ -1.44
DKK3Q9UBP4 RN7SKP166-201ENST00000410812 305 ntBASIC6.07□□□□□ -1.44
DKK3Q9UBP4 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC6.07□□□□□ -1.44
DKK3Q9UBP4 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC6.07□□□□□ -1.44
DKK3Q9UBP4 CETN4P-201ENST00000432407 469 ntBASIC6.07□□□□□ -1.44
DKK3Q9UBP4 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC6.07□□□□□ -1.44
DKK3Q9UBP4 AC006326.1-201ENST00000445465 787 ntBASIC6.07□□□□□ -1.44
DKK3Q9UBP4 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC6.07□□□□□ -1.44
DKK3Q9UBP4 GEMIN2P1-201ENST00000454246 752 ntBASIC6.07□□□□□ -1.44
DKK3Q9UBP4 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC6.07□□□□□ -1.44
DKK3Q9UBP4 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC6.07□□□□□ -1.44
DKK3Q9UBP4 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
DKK3Q9UBP4 AC020898.1-201ENST00000474167 787 ntBASIC6.07□□□□□ -1.44
DKK3Q9UBP4 LARP7P4-201ENST00000481075 878 ntBASIC6.07□□□□□ -1.44
DKK3Q9UBP4 RPL23AP40-201ENST00000487630 390 ntBASIC6.07□□□□□ -1.44
DKK3Q9UBP4 RN7SL193P-201ENST00000491708 276 ntBASIC6.07□□□□□ -1.44
DKK3Q9UBP4 AC021146.5-201ENST00000503544 545 ntBASIC6.07□□□□□ -1.44
DKK3Q9UBP4 PRELID3BP6-201ENST00000503839 571 ntBASIC6.07□□□□□ -1.44
DKK3Q9UBP4 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC6.07□□□□□ -1.44
DKK3Q9UBP4 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC6.07□□□□□ -1.44
DKK3Q9UBP4 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC6.07□□□□□ -1.44
DKK3Q9UBP4 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC6.07□□□□□ -1.44
DKK3Q9UBP4 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC6.07□□□□□ -1.44
DKK3Q9UBP4 TPM3P3-201ENST00000521343 354 ntBASIC6.07□□□□□ -1.44
DKK3Q9UBP4 SOX5P1-201ENST00000524155 1127 ntBASIC6.07□□□□□ -1.44
DKK3Q9UBP4 RERGL-202ENST00000536890 367 ntTSL 3 BASIC6.07□□□□□ -1.44
DKK3Q9UBP4 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC6.07□□□□□ -1.44
DKK3Q9UBP4 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC6.07□□□□□ -1.44
DKK3Q9UBP4 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC6.07□□□□□ -1.44
DKK3Q9UBP4 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.07□□□□□ -1.44
DKK3Q9UBP4 AC090651.1-201ENST00000567865 634 ntBASIC6.07□□□□□ -1.44
DKK3Q9UBP4 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.07□□□□□ -1.44
DKK3Q9UBP4 AC004775.1-201ENST00000607389 753 ntBASIC6.07□□□□□ -1.44
DKK3Q9UBP4 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC6.07□□□□□ -1.44
DKK3Q9UBP4 AC008759.3-201ENST00000613300 508 ntBASIC6.07□□□□□ -1.44
DKK3Q9UBP4 AL096712.1-201ENST00000614561 159 ntBASIC6.07□□□□□ -1.44
DKK3Q9UBP4 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC6.07□□□□□ -1.44
DKK3Q9UBP4 AC007275.1-201ENST00000621243 671 ntBASIC6.07□□□□□ -1.44
DKK3Q9UBP4 AC004777.1-201ENST00000624317 287 ntBASIC6.07□□□□□ -1.44
DKK3Q9UBP4 KARSP1-201ENST00000451871 1752 ntBASIC6.07□□□□□ -1.44
DKK3Q9UBP4 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
DKK3Q9UBP4 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
DKK3Q9UBP4 AC004158.1-201ENST00000564508 4319 ntBASIC6.07□□□□□ -1.44
DKK3Q9UBP4 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.07□□□□□ -1.44
DKK3Q9UBP4 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
DKK3Q9UBP4 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
DKK3Q9UBP4 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC6.07□□□□□ -1.44
DKK3Q9UBP4 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
DKK3Q9UBP4 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
DKK3Q9UBP4 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
DKK3Q9UBP4 SAMM50P1-201ENST00000455403 1399 ntBASIC6.06□□□□□ -1.44
DKK3Q9UBP4 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
DKK3Q9UBP4 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
DKK3Q9UBP4 AL929601.4-201ENST00000613011 1341 ntBASIC6.06□□□□□ -1.44
DKK3Q9UBP4 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.06□□□□□ -1.44
DKK3Q9UBP4 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 140.8 ms