Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AC009597.2-201ENST00000604659 592 ntBASIC5.63□□□□□ -1.51
CISHQ9NSE2 AC011626.1-201ENST00000604710 562 ntBASIC5.63□□□□□ -1.51
CISHQ9NSE2 AL512329.2-201ENST00000607350 548 ntBASIC5.63□□□□□ -1.51
CISHQ9NSE2 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.63□□□□□ -1.51
CISHQ9NSE2 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.63□□□□□ -1.51
CISHQ9NSE2 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.63□□□□□ -1.51
CISHQ9NSE2 MIR6839-201ENST00000620425 113 ntBASIC5.63□□□□□ -1.51
CISHQ9NSE2 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CISHQ9NSE2 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
CISHQ9NSE2 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
CISHQ9NSE2 AL121839.2-201ENST00000565058 6943 ntBASIC5.63□□□□□ -1.51
CISHQ9NSE2 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CISHQ9NSE2 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
CISHQ9NSE2 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC5.63□□□□□ -1.51
CISHQ9NSE2 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
CISHQ9NSE2 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CISHQ9NSE2 AC023421.1-201ENST00000590535 1785 ntBASIC5.62□□□□□ -1.51
CISHQ9NSE2 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CISHQ9NSE2 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CISHQ9NSE2 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.62□□□□□ -1.51
CISHQ9NSE2 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
CISHQ9NSE2 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
CISHQ9NSE2 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
CISHQ9NSE2 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CISHQ9NSE2 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.62□□□□□ -1.51
CISHQ9NSE2 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CISHQ9NSE2 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CISHQ9NSE2 RNA5SP514-201ENST00000363717 111 ntBASIC5.62□□□□□ -1.51
CISHQ9NSE2 MIR589-201ENST00000385238 99 ntBASIC5.62□□□□□ -1.51
CISHQ9NSE2 RN7SKP229-201ENST00000410465 302 ntBASIC5.62□□□□□ -1.51
CISHQ9NSE2 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.62□□□□□ -1.51
CISHQ9NSE2 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.62□□□□□ -1.51
CISHQ9NSE2 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.62□□□□□ -1.51
CISHQ9NSE2 AL606490.1-201ENST00000452266 765 ntBASIC5.62□□□□□ -1.51
CISHQ9NSE2 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC5.62□□□□□ -1.51
CISHQ9NSE2 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.62□□□□□ -1.51
CISHQ9NSE2 AC128716.1-201ENST00000475129 166 ntBASIC5.62□□□□□ -1.51
CISHQ9NSE2 RN7SL814P-201ENST00000487715 300 ntBASIC5.62□□□□□ -1.51
CISHQ9NSE2 AC011411.1-201ENST00000509592 876 ntBASIC5.62□□□□□ -1.51
CISHQ9NSE2 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CISHQ9NSE2 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.62□□□□□ -1.51
CISHQ9NSE2 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5.62□□□□□ -1.51
CISHQ9NSE2 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
CISHQ9NSE2 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
CISHQ9NSE2 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
CISHQ9NSE2 RN7SL753P-201ENST00000581238 290 ntBASIC5.62□□□□□ -1.51
CISHQ9NSE2 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.62□□□□□ -1.51
CISHQ9NSE2 Xist_exon4.1-201ENST00000615964 126 ntBASIC5.62□□□□□ -1.51
CISHQ9NSE2 AC090527.3-201ENST00000619041 548 ntBASIC5.62□□□□□ -1.51
CISHQ9NSE2 AC008115.4-201ENST00000619780 775 ntBASIC5.62□□□□□ -1.51
CISHQ9NSE2 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.62□□□□□ -1.51
CISHQ9NSE2 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
CISHQ9NSE2 AL592429.1-201ENST00000403909 1473 ntBASIC5.62□□□□□ -1.51
CISHQ9NSE2 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.62□□□□□ -1.51
CISHQ9NSE2 AC011493.1-201ENST00000596753 1632 ntBASIC5.62□□□□□ -1.51
CISHQ9NSE2 AL034549.2-201ENST00000618285 3373 ntBASIC5.62□□□□□ -1.51
CISHQ9NSE2 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.62□□□□□ -1.51
CISHQ9NSE2 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CISHQ9NSE2 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CISHQ9NSE2 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.62□□□□□ -1.51
CISHQ9NSE2 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CISHQ9NSE2 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.62□□□□□ -1.51
CISHQ9NSE2 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CISHQ9NSE2 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CISHQ9NSE2 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.61□□□□□ -1.51
CISHQ9NSE2 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.61□□□□□ -1.51
CISHQ9NSE2 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.61□□□□□ -1.51
CISHQ9NSE2 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
CISHQ9NSE2 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
CISHQ9NSE2 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
CISHQ9NSE2 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CISHQ9NSE2 OR52B5P-201ENST00000435337 951 ntBASIC5.61□□□□□ -1.51
CISHQ9NSE2 AC245047.2-201ENST00000441060 530 ntBASIC5.61□□□□□ -1.51
CISHQ9NSE2 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.61□□□□□ -1.51
CISHQ9NSE2 Z92846.1-201ENST00000456203 268 ntBASIC5.61□□□□□ -1.51
CISHQ9NSE2 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC5.61□□□□□ -1.51
CISHQ9NSE2 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.61□□□□□ -1.51
CISHQ9NSE2 AC006427.1-201ENST00000514359 712 ntBASIC5.61□□□□□ -1.51
CISHQ9NSE2 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.61□□□□□ -1.51
CISHQ9NSE2 AC130360.2-201ENST00000533477 1556 ntBASIC5.61□□□□□ -1.51
CISHQ9NSE2 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC5.61□□□□□ -1.51
CISHQ9NSE2 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.61□□□□□ -1.51
CISHQ9NSE2 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.61□□□□□ -1.51
CISHQ9NSE2 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.61□□□□□ -1.51
CISHQ9NSE2 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.61□□□□□ -1.51
CISHQ9NSE2 RN7SL708P-201ENST00000580952 299 ntBASIC5.61□□□□□ -1.51
CISHQ9NSE2 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.61□□□□□ -1.51
CISHQ9NSE2 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.61□□□□□ -1.51
CISHQ9NSE2 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.61□□□□□ -1.51
CISHQ9NSE2 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.61□□□□□ -1.51
CISHQ9NSE2 CGA-206ENST00000630630 832 ntTSL 2 BASIC5.61□□□□□ -1.51
CISHQ9NSE2 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.61□□□□□ -1.51
CISHQ9NSE2 OR52B5P-202ENST00000641118 1110 ntBASIC5.61□□□□□ -1.51
CISHQ9NSE2 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CISHQ9NSE2 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.61□□□□□ -1.51
CISHQ9NSE2 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CISHQ9NSE2 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CISHQ9NSE2 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CISHQ9NSE2 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
CISHQ9NSE2 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 145.4 ms