Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 RNU6-1120P-201ENST00000362988 108 ntBASIC9.61□□□□□ -0.87
RTN4Q9NQC3 RNU6-97P-201ENST00000363387 104 ntBASIC9.61□□□□□ -0.87
RTN4Q9NQC3 RNU6-1097P-201ENST00000363586 107 ntBASIC9.61□□□□□ -0.87
RTN4Q9NQC3 RNU6-359P-201ENST00000365466 108 ntBASIC9.61□□□□□ -0.87
RTN4Q9NQC3 RNU1-39P-201ENST00000383897 165 ntBASIC9.61□□□□□ -0.87
RTN4Q9NQC3 RPL31P1-201ENST00000398116 372 ntBASIC9.61□□□□□ -0.87
RTN4Q9NQC3 CCDC148-AS1-201ENST00000412781 795 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
RTN4Q9NQC3 RPL35AP24-201ENST00000413846 330 ntBASIC9.61□□□□□ -0.87
RTN4Q9NQC3 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC9.61□□□□□ -0.87
RTN4Q9NQC3 ACTG1P1-201ENST00000415794 1129 ntBASIC9.61□□□□□ -0.87
RTN4Q9NQC3 AL161742.1-201ENST00000418154 584 ntBASIC9.61□□□□□ -0.87
RTN4Q9NQC3 DPPA2P2-201ENST00000418220 897 ntBASIC9.61□□□□□ -0.87
RTN4Q9NQC3 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC9.61□□□□□ -0.87
RTN4Q9NQC3 KRT223P-201ENST00000422957 519 ntTSL 2 BASIC9.61□□□□□ -0.87
RTN4Q9NQC3 AL359076.1-201ENST00000426860 420 ntTSL 3 BASIC9.61□□□□□ -0.87
RTN4Q9NQC3 LINC00112-201ENST00000432830 522 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
RTN4Q9NQC3 LINC01468-202ENST00000435813 975 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
RTN4Q9NQC3 AC114495.1-201ENST00000441274 436 ntBASIC9.61□□□□□ -0.87
RTN4Q9NQC3 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC9.61□□□□□ -0.87
RTN4Q9NQC3 AC108114.1-201ENST00000477321 437 ntBASIC9.61□□□□□ -0.87
RTN4Q9NQC3 RN7SL397P-201ENST00000487309 298 ntBASIC9.61□□□□□ -0.87
RTN4Q9NQC3 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC9.61□□□□□ -0.87
RTN4Q9NQC3 AC091951.2-201ENST00000500762 203 ntBASIC9.61□□□□□ -0.87
RTN4Q9NQC3 GAPDHP44-201ENST00000513513 1007 ntBASIC9.61□□□□□ -0.87
RTN4Q9NQC3 AC103719.1-201ENST00000517994 581 ntTSL 4 BASIC9.61□□□□□ -0.87
RTN4Q9NQC3 RPSAP74-201ENST00000522047 393 ntBASIC9.61□□□□□ -0.87
RTN4Q9NQC3 AC023232.1-201ENST00000524963 285 ntBASIC9.61□□□□□ -0.87
RTN4Q9NQC3 OR5AN2P-201ENST00000534535 896 ntBASIC9.61□□□□□ -0.87
RTN4Q9NQC3 DDIT3-204ENST00000551116 1067 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
RTN4Q9NQC3 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC9.61□□□□□ -0.87
RTN4Q9NQC3 AL356432.3-201ENST00000568952 465 ntBASIC9.61□□□□□ -0.87
RTN4Q9NQC3 TBX18-AS1-208ENST00000591225 762 ntTSL 5 BASIC9.61□□□□□ -0.87
RTN4Q9NQC3 AC087045.1-201ENST00000605856 382 ntBASIC9.61□□□□□ -0.87
RTN4Q9NQC3 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC9.61□□□□□ -0.87
RTN4Q9NQC3 SMIM11B-204ENST00000623661 1021 ntAPPRIS P1 TSL 3 BASIC9.61□□□□□ -0.87
RTN4Q9NQC3 AL121936.2-201ENST00000641935 662 ntBASIC9.61□□□□□ -0.87
RTN4Q9NQC3 TRIM48-201ENST00000417545 1445 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
RTN4Q9NQC3 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
RTN4Q9NQC3 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
RTN4Q9NQC3 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
RTN4Q9NQC3 RNF14-203ENST00000394514 2905 ntTSL 2 BASIC9.61□□□□□ -0.87
RTN4Q9NQC3 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
RTN4Q9NQC3 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC9.61□□□□□ -0.87
RTN4Q9NQC3 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
RTN4Q9NQC3 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
RTN4Q9NQC3 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
RTN4Q9NQC3 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
RTN4Q9NQC3 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
RTN4Q9NQC3 ARHGEF12-201ENST00000356641 6891 ntTSL 5 BASIC9.6□□□□□ -0.87
RTN4Q9NQC3 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
RTN4Q9NQC3 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
RTN4Q9NQC3 SLFN12L-201ENST00000260908 3119 ntAPPRIS P2 TSL 5 BASIC9.6□□□□□ -0.87
RTN4Q9NQC3 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC9.6□□□□□ -0.87
RTN4Q9NQC3 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
RTN4Q9NQC3 RNU5E-1-201ENST00000362477 120 ntBASIC9.6□□□□□ -0.87
RTN4Q9NQC3 RNA5-8SP2-201ENST00000363564 152 ntBASIC9.6□□□□□ -0.87
RTN4Q9NQC3 RNU6-282P-201ENST00000365357 103 ntBASIC9.6□□□□□ -0.87
RTN4Q9NQC3 RNU6-456P-201ENST00000384493 107 ntBASIC9.6□□□□□ -0.87
RTN4Q9NQC3 IGLV3-25-201ENST00000390305 380 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
RTN4Q9NQC3 CALM2-202ENST00000409563 770 ntTSL 5 BASIC9.6□□□□□ -0.87
RTN4Q9NQC3 GEMIN6-203ENST00000409566 834 ntTSL 2 BASIC9.6□□□□□ -0.87
RTN4Q9NQC3 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
RTN4Q9NQC3 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC9.6□□□□□ -0.87
RTN4Q9NQC3 PPIAP30-201ENST00000415473 519 ntBASIC9.6□□□□□ -0.87
RTN4Q9NQC3 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC9.6□□□□□ -0.87
RTN4Q9NQC3 AC003989.1-201ENST00000434569 565 ntBASIC9.6□□□□□ -0.87
RTN4Q9NQC3 AL109810.1-201ENST00000435008 495 ntBASIC9.6□□□□□ -0.87
RTN4Q9NQC3 RPL7P54-201ENST00000438336 674 ntBASIC9.6□□□□□ -0.87
RTN4Q9NQC3 ZBTB20-AS5-201ENST00000465249 622 ntTSL 3 BASIC9.6□□□□□ -0.87
RTN4Q9NQC3 AC087501.2-201ENST00000466869 581 ntBASIC9.6□□□□□ -0.87
RTN4Q9NQC3 RNU4ATAC10P-201ENST00000516967 122 ntBASIC9.6□□□□□ -0.87
RTN4Q9NQC3 CEP57L1-214ENST00000521277 3832 ntTSL 2 BASIC9.6□□□□□ -0.87
RTN4Q9NQC3 AP000907.2-201ENST00000530827 353 ntBASIC9.6□□□□□ -0.87
RTN4Q9NQC3 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC9.6□□□□□ -0.87
RTN4Q9NQC3 FDPSP4-201ENST00000534629 1049 ntBASIC9.6□□□□□ -0.87
RTN4Q9NQC3 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC9.6□□□□□ -0.87
RTN4Q9NQC3 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC9.6□□□□□ -0.87
RTN4Q9NQC3 PRR13-204ENST00000547368 688 ntAPPRIS ALT2 TSL 3 BASIC9.6□□□□□ -0.87
RTN4Q9NQC3 AL133304.1-201ENST00000548199 549 ntTSL 4 BASIC9.6□□□□□ -0.87
RTN4Q9NQC3 AC004816.1-202ENST00000557691 629 ntTSL 2 BASIC9.6□□□□□ -0.87
RTN4Q9NQC3 NDUFA3P6-201ENST00000571486 250 ntBASIC9.6□□□□□ -0.87
RTN4Q9NQC3 MIR4253-201ENST00000581187 68 ntBASIC9.6□□□□□ -0.87
RTN4Q9NQC3 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC9.6□□□□□ -0.87
RTN4Q9NQC3 AC068790.3-201ENST00000602988 553 ntBASIC9.6□□□□□ -0.87
RTN4Q9NQC3 AC019080.4-201ENST00000606200 564 ntTSL 5 BASIC9.6□□□□□ -0.87
RTN4Q9NQC3 AC244517.8-201ENST00000623995 467 ntTSL 4 BASIC9.6□□□□□ -0.87
RTN4Q9NQC3 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
RTN4Q9NQC3 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC9.6□□□□□ -0.87
RTN4Q9NQC3 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
RTN4Q9NQC3 AC027088.4-201ENST00000611559 1947 ntBASIC9.6□□□□□ -0.87
RTN4Q9NQC3 LINC01630-208ENST00000635680 4363 ntTSL 5 BASIC9.6□□□□□ -0.87
RTN4Q9NQC3 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC9.6□□□□□ -0.87
RTN4Q9NQC3 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC9.6□□□□□ -0.87
RTN4Q9NQC3 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC9.6□□□□□ -0.87
RTN4Q9NQC3 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC9.6□□□□□ -0.87
RTN4Q9NQC3 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
RTN4Q9NQC3 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
RTN4Q9NQC3 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC9.59□□□□□ -0.87
RTN4Q9NQC3 TMEM246-203ENST00000374851 5070 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
RTN4Q9NQC3 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 154.3 ms